iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131065

UUCD1 version

UUC-ViV-00229

Ensembl Protein ID

VIT_08s0007g00490.t01

UniProt Accession

D7THM7; D7THM7_VITVI

Genbank Protein ID

CBI30543.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g00490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g00490	VIT_08s0007g00490.t01	VIT_08s0007g00490.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-22	79.3	77	114

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sdtllvsGsdDgtikvWDlrt 32
           H++ vt+l+f        + + l+s+sdDg++ ++D + 
   Q: 77   HSGAVTSLSFfspsslsfP-RNLLSASDDGSVCIYDADP 114
           9********9997665432.449*************665 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSIVAGSYEK FIWGFKLKSL KKSQTLTLTP LFSYPSHLSP IKSVAVAGPV AASGGTDDSV 60
KVYDLSSCSE IGTLTDHSGA VTSLSFFSPS SLSFPRNLLS ASDDGSVCIY DADPFVHLKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCCGGGCC CAATTCAAGA TTTTGCCCTG CAACACCCTT TCTCCGTCCA CCAATCACCC 60
TACACCTCTC CCTAAACCCC ACTAGAACCC TTTCTCTCCT GTTTTTGGGG TTTCTGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus

KEGG

vvi:100257947

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000839	Aegilops tauschii	62.41	4.00e-41	159.00
IUUC-Aml-001803	Ailuropoda melanoleuca	32.38	6.00e-43	167.00
IUUC-Atr-003018	Amborella trichopoda	51.24	1.00e-94	339.00
IUUC-Apl-004199	Anas platyrhynchos	33.89	9.00e-43	166.00
IUUC-Aca-005157	Anolis carolinensis	33.12	3.00e-38	151.00
IUUC-Aly-006245	Arabidopsis lyrata	67.26	4.00e-120	423.00
IUUC-Ath-007309	Arabidopsis thaliana	68.15	6.00e-123	432.00
IUUC-Ago-007878	Ashbya gossypii	27.49	2.00e-24	105.00
IUUC-Acl-008015	Aspergillus clavatus	24.30	5.00e-17	81.60
IUUC-Afl-008460	Aspergillus flavus	21.71	5.00e-12	65.10
IUUC-Afu-008760	Aspergillus fumigatus	23.46	6.00e-16	78.20
IUUC-Ani-009358	Aspergillus nidulans	22.94	4.00e-14	72.00
IUUC-Aor-010146	Aspergillus oryzae	21.71	5.00e-12	65.10
IUUC-Ate-010411	Aspergillus terreus	22.34	2.00e-13	69.70
IUUC-Ame-011121	Astyanax mexicanus	34.82	2.00e-45	175.00
IUUC-Bgr-012152	Blumeria graminis	23.21	2.00e-12	65.90
IUUC-Bta-012383	Bos taurus	31.43	7.00e-41	160.00
IUUC-Bdi-014505	Brachypodium distachyon	48.61	4.00e-69	253.00
IUUC-Bol-015458	Brassica oleracea	65.10	2.00e-119	420.00
IUUC-Bra-017790	Brassica rapa	64.81	7.00e-119	419.00
IUUC-Cja-018803	Callithrix jacchus	32.51	2.00e-39	155.00
IUUC-Cfa-020178	Canis familiaris	32.06	5.00e-44	171.00
IUUC-Cpo-021785	Cavia porcellus	33.23	1.00e-43	169.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	34.94	5.00e-41	161.00
IUUC-Csa-023179	Chlorocebus sabaeus	33.55	4.00e-46	177.00
IUUC-Cho-025088	Choloepus hoffmanni	35.51	4.00e-33	134.00
IUUC-Csv-025887	Ciona savignyi	30.29	2.00e-30	125.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	23.86	7.00e-15	74.30
IUUC-Cne-027021	Cryptococcus neoformans	36.65	5.00e-26	112.00
IUUC-Dre-027360	Danio rerio	33.33	2.00e-47	182.00
IUUC-Dno-029836	Dasypus novemcinctus	33.14	3.00e-45	174.00
IUUC-Dor-030677	Dipodomys ordii	30.48	1.00e-35	142.00
IUUC-Dse-031177	Dothistroma septosporum	23.15	9.00e-12	64.30
IUUC-Dme-032004	Drosophila melanogaster	31.61	1.00e-28	119.00
IUUC-Ete-032837	Echinops telfairi	32.07	3.00e-36	144.00
IUUC-Eca-033291	Equus caballus	32.59	4.00e-43	167.00
IUUC-Eeu-035347	Erinaceus europaeus	32.07	2.00e-36	144.00
IUUC-Fca-036577	Felis catus	31.21	3.00e-42	164.00
IUUC-Fal-036810	Ficedula albicollis	31.09	1.00e-40	159.00
IUUC-Gmo-038537	Gadus morhua	33.93	1.00e-39	156.00
IUUC-Gga-040566	Gallus gallus	34.41	1.00e-45	176.00
IUUC-Gac-042422	Gasterosteus aculeatus	33.01	7.00e-43	166.00
IUUC-Gma-044006	Glycine max	66.77	3.00e-121	427.00
IUUC-Ggo-045365	Gorilla gorilla	26.56	3.00e-29	122.00
IUUC-Hsa-046121	Homo sapiens	33.23	3.00e-45	175.00
IUUC-Hvu-047592	Hordeum vulgare	59.76	7.00e-49	185.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	32.75	1.00e-39	155.00
IUUC-Kpa-049407	Komagataella pastoris	27.81	9.00e-27	113.00
IUUC-Lch-049767	Latimeria chalumnae	30.10	7.00e-43	166.00
IUUC-Lpe-051569	Leersia perrieri	50.30	1.00e-67	248.00
IUUC-Loc-051940	Lepisosteus oculatus	30.56	3.00e-40	158.00
IUUC-Lma-053288	Leptosphaeria maculans	21.09	1.00e-09	57.40
IUUC-Laf-054463	Loxodonta africana	31.95	4.00e-41	161.00
IUUC-Mcc-055412	Macaca mulatta	33.23	1.00e-45	176.00
IUUC-Mtr-057886	Medicago truncatula	70.09	4.00e-113	399.00
IUUC-Mla-058862	Melampsora laricipopulina	25.79	3.00e-15	75.50
IUUC-Mga-060109	Meleagris gallopavo	34.95	8.00e-43	166.00
IUUC-Mvi-060326	Microbotryum violaceum	31.13	3.00e-23	102.00
IUUC-Mmr-060681	Microcebus murinus	31.75	2.00e-42	166.00
IUUC-Mdo-063004	Monodelphis domestica	32.80	4.00e-42	164.00
IUUC-Mmu-064184	Mus musculus	33.87	2.00e-42	165.00
IUUC-Mac-064987	Musa acuminata	64.67	2.00e-110	391.00
IUUC-Mpu-065847	Mustela putorius furo	32.06	8.00e-42	163.00
IUUC-Mlu-067608	Myotis lucifugus	32.91	4.00e-43	167.00
IUUC-Nfi-068531	Neosartorya fischeri	22.98	2.00e-14	72.80
IUUC-Nle-069302	Nomascus leucogenys	32.91	1.00e-44	172.00
IUUC-Ont-072591	Oreochromis niloticus	34.73	3.00e-41	161.00
IUUC-Oan-073558	Ornithorhynchus anatinus	35.95	7.00e-35	139.00
IUUC-Ocu-074558	Oryctolagus cuniculus	33.23	4.00e-39	154.00
IUUC-Obr-076509	Oryza brachyantha	58.65	1.00e-40	157.00
IUUC-Ogl-076960	Oryza glaberrima	49.09	1.00e-70	258.00
IUUC-Ogu-078660	Oryza glumaepatula	47.58	6.00e-65	239.00
IUUC-Oin-079790	Oryza indica	51.38	1.00e-79	288.00
IUUC-Ome-081631	Oryza meridionalis	45.73	3.00e-50	191.00
IUUC-Oni-083082	Oryza nivara	49.39	2.00e-70	258.00
IUUC-Opu-083394	Oryza punctata	50.30	1.00e-76	279.00
IUUC-Oru-084461	Oryza rufipogon	48.49	3.00e-70	257.00
IUUC-Osa-085655	Oryza sativa	53.98	1.00e-64	238.00
IUUC-Ola-086955	Oryzias latipes	35.05	7.00e-48	183.00
IUUC-Olu-087657	Ostreococcus lucimarinus	32.72	3.00e-31	129.00
IUUC-Oga-088108	Otolemur garnettii	32.59	6.00e-44	170.00
IUUC-Oar-090019	Ovis aries	31.43	3.00e-40	158.00
IUUC-Ptr-091544	Pan troglodytes	33.23	2.00e-45	175.00
IUUC-Pan-092562	Papio anubis	33.23	1.00e-45	176.00
IUUC-Psi-094025	Pelodiscus sinensis	36.78	4.00e-30	124.00
IUUC-Pma-094322	Petromyzon marinus	33.55	1.00e-38	152.00
IUUC-Pno-095112	Phaeosphaeria nodorum	21.03	5.00e-08	52.00
IUUC-Ppa-095541	Physcomitrella patens	43.36	2.00e-63	234.00
IUUC-Pfo-096667	Poecilia formosa	32.73	1.00e-32	133.00
IUUC-Pab-098064	Pongo abelii	33.55	1.00e-45	176.00
IUUC-Pop-099969	Populus trichocarpa	74.70	9.00e-131	458.00
IUUC-Pca-101053	Procavia capensis	35.14	2.00e-42	165.00
IUUC-Ppe-101839	Prunus persica	72.35	2.00e-131	461.00
IUUC-Pva-102963	Pteropus vampyrus	32.17	3.00e-39	155.00
IUUC-Pgr-103276	Puccinia graminis	28.22	1.00e-20	93.60
IUUC-Ptt-103769	Puccinia triticina	29.79	2.00e-15	75.50
IUUC-Rno-105975	Rattus norvegicus	34.19	5.00e-42	164.00
IUUC-Sce-106226	Saccharomyces cerevisiae	25.64	1.00e-20	93.60
IUUC-Sha-106907	Sarcophilus harrisii	31.85	1.00e-41	162.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	25.62	3.00e-17	82.00
IUUC-Spo-108377	Schizosaccharomyces pombe	24.62	1.00e-18	86.30
IUUC-Smo-109068	Selaginella moellendorffii	41.77	3.00e-63	234.00
IUUC-Sit-110114	Setaria italica	49.24	1.00e-69	255.00
IUUC-Sly-111581	Solanum lycopersicum	70.09	2.00e-128	450.00
IUUC-Stu-112770	Solanum tuberosum	69.18	1.00e-127	447.00
IUUC-Sbi-114797	Sorghum bicolor	49.70	2.00e-63	234.00
IUUC-Sre-114941	Sporisorium reilianum	31.23	1.00e-33	137.00
IUUC-Ssc-116346	Sus scrofa	32.28	3.00e-42	164.00
IUUC-Tgu-116628	Taeniopygia guttata	34.08	8.00e-44	170.00
IUUC-Tru-117646	Takifugu rubripes	35.37	7.00e-44	170.00
IUUC-Tsy-119593	Tarsius syrichta	31.78	2.00e-26	112.00
IUUC-Tni-119872	Tetraodon nigroviridis	34.30	2.00e-46	178.00
IUUC-Tca-121500	Theobroma cacao	67.96	1.00e-122	431.00
IUUC-Tae-125015	Triticum aestivum	52.76	2.00e-76	278.00
IUUC-Tur-126015	Triticum urartu	60.14	3.00e-41	159.00
IUUC-Tme-127158	Tuber melanosporum	25.13	3.00e-06	45.80
IUUC-Tbe-127959	Tupaia belangeri	31.80	7.00e-36	143.00
IUUC-Ttr-129125	Tursiops truncatus	32.38	2.00e-42	165.00
IUUC-Uma-129567	Ustilago maydis	34.13	2.00e-31	129.00
IUUC-Vpa-130157	Vicugna pacos	37.58	5.00e-26	110.00
IUUC-Xtr-132601	Xenopus tropicalis	32.27	1.00e-39	156.00
IUUC-Xma-133142	Xiphophorus maculatus	32.32	2.00e-38	151.00
IUUC-Yli-134580	Yarrowia lipolytica	27.38	2.00e-23	102.00
IUUC-Zma-135330	Zea mays	53.33	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence