iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099598

Ensembl Protein ID

POPTR_0003s07640.1

UniProt Accession

B9GYD1; B9GYD1_POPTR

Genbank Protein ID

EEE79265.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_757043; POPTR_0003s07640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s07640	POPTR_0003s07640.1	POPTR_0003s07640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-07	31.1	287	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp..sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           +p+e++Cp+ +e+M+d v ++  +  ++  ++I+ ++ s+ k c    + +  +dl Pn+tlr++i++ +e
   Q: 287  LPPELHCPLCKEVMKDAVLTSkcCFTSFCDKCIRDYIISKSK-CVCGVSNVLADDLLPNKTLRDTINRILE 356
           79*****************998677889**********9999.999999999**************98766 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAVYYKFKSA RDYDSIPMDG PFISVGTLKE KIFESKHLGR GTDFDLVVTN AQTNEEYLDE 60
AMLIPKNTSV LIRRVPGRPR LPIVTEQEPK LETKVEDTLP EKGSFMGADS SSMRYTEDNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCCGTGC AACGCAAGCA AAAGCTATCA CCTCCCCTCT CTCTCTCTAT ACACACCCAC 60
CCGCACTATT TTCGCCCTTT TAACCACAAA TCCGTAAAAC TACCCCCCTA ATCGGGTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014891--DWNN_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN

Pfam

PF08783--DWNN
PF13696--zf-CCHC_2

SMART

SM01180--DWNN

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0003s07640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000195	Aegilops tauschii	55.96	4.00e-148	518.00
IUUC-Atr-002768	Amborella trichopoda	65.52	0.00e+00	656.00
IUUC-Aca-004345	Anolis carolinensis	35.50	7.00e-20	92.40
IUUC-Aly-006036	Arabidopsis lyrata	61.64	0.00e+00	628.00
IUUC-Ath-007648	Arabidopsis thaliana	59.61	0.00e+00	666.00
IUUC-Acl-008118	Aspergillus clavatus	25.34	3.00e-18	86.70
IUUC-Afu-008777	Aspergillus fumigatus	28.30	5.00e-27	115.00
IUUC-Ani-009426	Aspergillus nidulans	30.47	4.00e-32	132.00
IUUC-Ang-009735	Aspergillus niger	29.12	6.00e-29	121.00
IUUC-Aor-010213	Aspergillus oryzae	30.19	2.00e-28	120.00
IUUC-Ate-010474	Aspergillus terreus	28.23	3.00e-25	109.00
IUUC-Ame-010679	Astyanax mexicanus	31.34	2.00e-37	151.00
IUUC-Bgr-012229	Blumeria graminis	27.56	3.00e-27	116.00
IUUC-Bci-013880	Botrytis cinerea	29.17	6.00e-28	118.00
IUUC-Bdi-014276	Brachypodium distachyon	58.70	1.00e-150	526.00
IUUC-Bol-016223	Brassica oleracea	60.51	4.00e-169	587.00
IUUC-Bra-016670	Brassica rapa	58.60	0.00e+00	660.00
IUUC-Cel-018532	Caenorhabditis elegans	26.85	3.00e-25	110.00
IUUC-Cre-022712	Chlamydomonas reinhardtii	50.77	3.00e-13	69.30
IUUC-Cne-026921	Cryptococcus neoformans	29.04	3.00e-33	136.00
IUUC-Dre-028023	Danio rerio	31.81	7.00e-38	153.00
IUUC-Dor-030406	Dipodomys ordii	27.43	1.00e-18	89.00
IUUC-Dse-031312	Dothistroma septosporum	24.94	2.00e-19	90.50
IUUC-Dme-032133	Drosophila melanogaster	29.86	6.00e-38	152.00
IUUC-Fox-037976	Fusarium oxysporum	27.15	6.00e-27	115.00
IUUC-Fso-038202	Fusarium solani	26.96	1.00e-28	120.00
IUUC-Gmo-038618	Gadus morhua	33.51	1.00e-16	79.70
IUUC-Ggr-040035	Gaeumannomyces graminis	27.84	1.00e-24	107.00
IUUC-Gga-040908	Gallus gallus	36.09	3.00e-22	101.00
IUUC-Gma-044229	Glycine max	73.75	0.00e+00	901.00
IUUC-Hvu-047515	Hordeum vulgare	63.45	2.00e-92	331.00
IUUC-Lch-050524	Latimeria chalumnae	31.27	1.00e-37	152.00
IUUC-Lpe-050947	Leersia perrieri	59.28	1.00e-154	540.00
IUUC-Loc-052709	Lepisosteus oculatus	30.73	5.00e-32	134.00
IUUC-Meu-056399	Macropus eugenii	49.33	1.00e-15	79.70
IUUC-Mor-057073	Magnaporthe oryzae	25.76	4.00e-23	102.00
IUUC-Mpo-057378	Magnaporthe poae	27.47	3.00e-26	113.00
IUUC-Mtr-058761	Medicago truncatula	71.74	0.00e+00	804.00
IUUC-Mla-058840	Melampsora laricipopulina	34.12	1.00e-23	104.00
IUUC-Mdo-062295	Monodelphis domestica	31.56	8.00e-29	123.00
IUUC-Mac-064855	Musa acuminata	64.81	0.00e+00	724.00
IUUC-Nfi-068518	Neosartorya fischeri	28.30	1.00e-27	117.00
IUUC-Ncr-068886	Neurospora crassa	27.74	5.00e-29	122.00
IUUC-Nle-069717	Nomascus leucogenys	29.33	5.00e-37	150.00
IUUC-Opr-070280	Ochotona princeps	29.38	7.00e-31	129.00
IUUC-Oan-073300	Ornithorhynchus anatinus	50.00	4.00e-16	80.90
IUUC-Oba-075756	Oryza barthii	56.49	3.00e-142	498.00
IUUC-Obr-076580	Oryza brachyantha	60.39	3.00e-166	578.00
IUUC-Ogl-077759	Oryza glaberrima	61.44	4.00e-165	574.00
IUUC-Ogu-078657	Oryza glumaepatula	57.12	5.00e-143	501.00
IUUC-Oin-079481	Oryza indica	58.95	1.00e-152	533.00
IUUC-Olo-081062	Oryza longistaminata	52.16	3.00e-138	485.00
IUUC-Ome-081813	Oryza meridionalis	56.96	1.00e-142	499.00
IUUC-Oni-083007	Oryza nivara	56.96	8.00e-144	504.00
IUUC-Opu-083385	Oryza punctata	56.51	2.00e-142	499.00
IUUC-Oru-084861	Oryza rufipogon	57.12	2.00e-143	502.00
IUUC-Osa-085896	Oryza sativa	69.71	2.00e-148	518.00
IUUC-Ola-086418	Oryzias latipes	35.71	1.00e-13	69.30
IUUC-Olu-087631	Ostreococcus lucimarinus	52.70	2.00e-18	82.80
IUUC-Ptr-091311	Pan troglodytes	31.28	7.00e-38	153.00
IUUC-Psi-093605	Pelodiscus sinensis	36.09	2.00e-22	102.00
IUUC-Pma-094163	Petromyzon marinus	38.41	1.00e-20	92.80
IUUC-Ppa-095943	Physcomitrella patens	47.75	3.00e-95	343.00
IUUC-Pfo-096581	Poecilia formosa	29.30	2.00e-30	127.00
IUUC-Pca-100875	Procavia capensis	44.59	3.00e-13	71.60
IUUC-Ppe-101658	Prunus persica	73.54	0.00e+00	832.00
IUUC-Pgr-103275	Puccinia graminis	44.59	5.00e-16	79.30
IUUC-Ptt-104004	Puccinia triticina	30.71	2.00e-07	50.40
IUUC-Sja-107991	Schizosaccharomyces japonicus	32.08	8.00e-38	150.00
IUUC-Spo-108257	Schizosaccharomyces pombe	30.69	1.00e-37	150.00
IUUC-Ssl-108581	Sclerotinia sclerotiorum	28.42	2.00e-31	130.00
IUUC-Smo-109358	Selaginella moellendorffii	56.12	4.00e-104	370.00
IUUC-Sit-109920	Setaria italica	60.53	3.00e-156	545.00
IUUC-Sly-111616	Solanum lycopersicum	69.07	0.00e+00	791.00
IUUC-Stu-112648	Solanum tuberosum	50.13	2.00e-78	285.00
IUUC-Sar-113120	Sorex araneus	36.09	2.00e-22	102.00
IUUC-Sbi-113881	Sorghum bicolor	61.02	1.00e-159	556.00
IUUC-Tru-118525	Takifugu rubripes	31.03	2.00e-33	135.00
IUUC-Tca-121727	Theobroma cacao	72.26	0.00e+00	927.00
IUUC-Tre-122181	Trichoderma reesei	26.76	5.00e-27	115.00
IUUC-Tvi-122316	Trichoderma virens	27.08	2.00e-27	116.00
IUUC-Tae-125227	Triticum aestivum	55.96	4.00e-149	521.00
IUUC-Tur-126827	Triticum urartu	50.38	7.00e-134	470.00
IUUC-Tme-126984	Tuber melanosporum	28.39	2.00e-32	134.00
IUUC-Tbe-127263	Tupaia belangeri	50.00	5.00e-15	77.40
IUUC-Uma-129457	Ustilago maydis	30.21	9.00e-39	154.00
IUUC-Vpa-130795	Vicugna pacos	26.24	2.00e-18	88.60
IUUC-Vvi-131146	Vitis vinifera	66.31	0.00e+00	860.00
IUUC-Xma-133011	Xiphophorus maculatus	30.29	3.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence