iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044402

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000851

Gene Name

LOC100780952; GLYMA_18G000500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G00330	GLYMA18G00330.1	GLYMA18G00330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.40e-80	271.4	231	979

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           G+ NlgNtC++NS++Q L++++ lr+++l+     l+      p g+l++sl+klf+e    ++ k++++pr+++ ++++++++f+gy+q+D++
   Q: 231  GMINLGNTCFFNSIMQNLLAMNRLRDNFLK-----LD-----APVGPLISSLKKLFTETNpeSGLKNVINPRSFFGCVCSKSPQFRGYQQHDSH 314
           9*****************************.....43.....4789*************99999****************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.. 185
           E+l++lld+l++e           + +    ++++ +++++ +++++l++ lF+g ++s++ c ec++ s+ +epfldlslpvp k+    +  
   Q: 315  ELLRCLLDGLSTEE----------LAG----RKQNGSPKRDGTSSNTLVDALFGGLISSTVCCIECGHFSTVYEPFLDLSLPVPTKKPPPRKaq 394
           ***********999..........222....3344577899*******************************************9996544489 PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 395  qeprtkkaklppkkggkirvrvnrdtdslpvqtqsnqlsspesscldqsiisvagemgtcsadstllvseeiksvadkedlsspnlvtagesqh 488
           999******************************************************************************************* PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 489  tqvidngamktldefswldyveaganecdfisqkedapevqdteskdeclnelhgqatcessgpvcflkedqnlsptfssangwedevplqvqg 582
           ********************************************************************************************** PP
   S: 186  ..........................................................................................slqd 189
                                                                                                     s+++
   Q: 583  sevlllpykeesssaaeiiggdgegsssvlgggqeelefdgfgdlfnepevvagpaprpsscsevmeagfiigsnsesdpdevddtdspvSVES 676
           ********************************************************************************************** PP
   S: 190  cLesftkeeelegenkyycekck....................................................................... 212
           cL++f k+e l +en+++ce+c                                                                        
   Q: 677  CLAHFIKPELLSDENAWHCENCSkvlqhqkmeekkqaravsdrnetgihdepwhavnscsvkvrtigngdikndqnvqnlvacdkhktnlengq 770
           ********************************************************************************************** PP
   S: 213  .............................................................................kkqeaekklklkklPev 229
                                                                                         k++a+k++ + k P+v
   Q: 771  rdelslivnekdsgsfemedthndelqsssfhntcneescshlavdscvtenvqrrdspmigsdnndseeadsksvkVKRDATKRVLIYKAPPV 864
           *****************************************************9999999999999999999999888888************* PP
   S: 230  LilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn...........ekgk...Wllf 309
           L++hLkRfs + + ++ +k+n +v+f +++d++p+   ++ ++ ek+ Y L++ v HsG++++GHYvayv+            +  +   W++ 
   Q: 865  LTIHLKRFSQDAR-GRLSKLNGHVNFRETMDIRPYIDPRCINE-EKYAYHLVGLVEHSGTMRGGHYVAYVRGgqrncgkgdkeN--EgstWYQA 954
           ********77665.8899********************99997.5***************************888888776542..1568**** PP
   S: 310  dDskVtevkeeevleetgstaYvlfYkr 337
           +D +V+ev+ +evl+   ++aY+lfY++
   Q: 955  SDAYVREVSLDEVLR---CEAYILFYEK 979
           ***************...********97 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGKKVRKKTR GSAKEMGVAT HLPIKVIESS NPTVESFDEV AKETNSCPHL VKGVNFDRLS 60
TKVGSSGSIR CEDCREGATN RRSGKGKGKH GKKKGGASLD SKSESKSIWV CLECGQYTCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAAATATT GGAATTAAAA TAGTGATTTA ATGAATCTAG TGAGGATATA GATTAAGATT 60
AGGGTACAGT TGCGTGCTTG GTTTCTTCTC AAAAGAGGGG GCGGATCGGG TAGTGACCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100780952

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	31.54	8.00e-77	282.00
IUUC-Aml-001931	Ailuropoda melanoleuca	28.97	6.00e-32	132.00
IUUC-Atr-003015	Amborella trichopoda	41.24	2.00e-75	277.00
IUUC-Aca-004314	Anolis carolinensis	29.37	2.00e-30	128.00
IUUC-Aly-005494	Arabidopsis lyrata	44.52	4.00e-177	615.00
IUUC-Ath-007211	Arabidopsis thaliana	43.78	3.00e-180	625.00
IUUC-Bta-013362	Bos taurus	28.57	3.00e-31	130.00
IUUC-Bra-017226	Brassica rapa	44.38	2.00e-126	446.00
IUUC-Cfa-020051	Canis familiaris	29.34	2.00e-31	130.00
IUUC-Cpo-021886	Cavia porcellus	28.97	2.00e-33	137.00
IUUC-Csa-024103	Chlorocebus sabaeus	27.11	2.00e-29	124.00
IUUC-Csv-026075	Ciona savignyi	35.57	1.00e-18	88.20
IUUC-Cme-027348	Cyanidioschyzon merolae	34.78	3.00e-18	87.00
IUUC-Dre-028388	Danio rerio	28.57	3.00e-32	133.00
IUUC-Dno-029409	Dasypus novemcinctus	28.24	8.00e-32	132.00
IUUC-Dme-031870	Drosophila melanogaster	30.24	2.00e-15	78.60
IUUC-Ete-032807	Echinops telfairi	43.33	4.00e-26	113.00
IUUC-Eca-033479	Equus caballus	28.64	5.00e-32	132.00
IUUC-Fca-036320	Felis catus	28.90	1.00e-31	131.00
IUUC-Fal-037029	Ficedula albicollis	27.86	4.00e-33	136.00
IUUC-Gmo-039480	Gadus morhua	29.82	2.00e-28	120.00
IUUC-Gga-040527	Gallus gallus	29.77	4.00e-33	136.00
IUUC-Ggo-045598	Gorilla gorilla	27.11	9.00e-29	122.00
IUUC-Hvu-047146	Hordeum vulgare	31.29	5.00e-68	253.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	27.92	1.00e-31	131.00
IUUC-Lch-050536	Latimeria chalumnae	28.84	6.00e-33	136.00
IUUC-Loc-051814	Lepisosteus oculatus	27.12	1.00e-31	131.00
IUUC-Laf-053732	Loxodonta africana	29.56	5.00e-33	136.00
IUUC-Mcc-054661	Macaca mulatta	27.11	2.00e-29	124.00
IUUC-Meu-055967	Macropus eugenii	25.52	3.00e-25	110.00
IUUC-Mtr-057945	Medicago truncatula	63.83	0.00e+00	1174.00
IUUC-Mga-059551	Meleagris gallopavo	28.97	2.00e-35	144.00
IUUC-Mvi-060391	Microbotryum violaceum	32.95	2.00e-16	81.30
IUUC-Mmr-061747	Microcebus murinus	27.23	5.00e-30	126.00
IUUC-Mmu-063582	Mus musculus	28.88	1.00e-32	135.00
IUUC-Mac-064941	Musa acuminata	35.33	3.00e-88	320.00
IUUC-Mpu-066339	Mustela putorius furo	28.97	2.00e-31	131.00
IUUC-Mlu-067511	Myotis lucifugus	28.39	1.00e-31	132.00
IUUC-Ont-071786	Oreochromis niloticus	27.75	5.00e-33	136.00
IUUC-Oan-073656	Ornithorhynchus anatinus	29.15	4.00e-31	130.00
IUUC-Ocu-074704	Oryctolagus cuniculus	28.43	5.00e-31	129.00
IUUC-Ola-086795	Oryzias latipes	27.67	2.00e-31	131.00
IUUC-Oga-088713	Otolemur garnettii	28.71	5.00e-31	129.00
IUUC-Oar-089887	Ovis aries	29.08	6.00e-32	132.00
IUUC-Ptr-091670	Pan troglodytes	27.11	2.00e-28	121.00
IUUC-Pan-092293	Papio anubis	27.11	2.00e-29	124.00
IUUC-Psi-093101	Pelodiscus sinensis	28.36	6.00e-30	125.00
IUUC-Ppa-095622	Physcomitrella patens	32.61	2.00e-45	178.00
IUUC-Pfo-097202	Poecilia formosa	27.07	5.00e-32	133.00
IUUC-Pab-098539	Pongo abelii	27.34	1.00e-30	128.00
IUUC-Pop-099136	Populus trichocarpa	50.10	0.00e+00	847.00
IUUC-Ppe-101794	Prunus persica	53.79	0.00e+00	829.00
IUUC-Rno-105237	Rattus norvegicus	29.52	6.00e-32	132.00
IUUC-Smo-108723	Selaginella moellendorffii	50.88	8.00e-41	160.00
IUUC-Sit-110283	Setaria italica	34.51	1.00e-76	281.00
IUUC-Sly-111487	Solanum lycopersicum	42.97	0.00e+00	694.00
IUUC-Stu-112499	Solanum tuberosum	43.17	0.00e+00	717.00
IUUC-Sar-113530	Sorex araneus	30.38	1.00e-31	131.00
IUUC-Sbi-113785	Sorghum bicolor	31.70	9.00e-67	248.00
IUUC-Ssc-116091	Sus scrofa	27.04	1.00e-30	128.00
IUUC-Tru-118640	Takifugu rubripes	29.14	9.00e-36	145.00
IUUC-Tsy-118869	Tarsius syrichta	29.61	4.00e-27	116.00
IUUC-Tni-120015	Tetraodon nigroviridis	26.83	2.00e-32	134.00
IUUC-Tca-121701	Theobroma cacao	53.73	0.00e+00	903.00
IUUC-Tae-125351	Triticum aestivum	31.38	9.00e-70	258.00
IUUC-Tur-126788	Triticum urartu	30.63	2.00e-67	250.00
IUUC-Tbe-128041	Tupaia belangeri	34.85	1.00e-25	112.00
IUUC-Vvi-131230	Vitis vinifera	75.41	1.00e-25	107.00
IUUC-Xtr-131869	Xenopus tropicalis	29.68	7.00e-32	132.00
IUUC-Xma-134195	Xiphophorus maculatus	28.01	1.00e-32	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence