iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049525

Ensembl Protein ID

ENSLACP00000019748.1

UniProt Accession

H3BCX7; H3BCX7_LATCH

Genbank Protein ID

ENSLACP00000019748

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01015918

Gene Name

EML3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000017363.1	ENSLACT00000019886.1	ENSLACP00000019748.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-13	49.7	548	579
UBD/Beta-Prp	3.10e-40	138.4	549	810

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHtd+ ++la    + +l++++++D+++ +W+ 
   Q: 548  GHTDELWGLAThpfQ-NLFLTCGHDKQLCLWNA 579
           8*******9877543.8**************95 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkgheds 96
           h++ +  ++ +p+++l++t + d+ + +w++ + +l +     e +  + +f+p+g + v+++   +   v d++t ++v  +   +++
   Q: 549  HTDELWGLATHPFQNLFLTCGHDKQLCLWNAADHTLAWNTTLEE-TGLCADFHPSG-LVVSAGLNsGRWVVLDMETKEIVTDYIDGNEQ 635
           55566669999**********************98866655444.4579******9.999998877555566***************** PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           +  +++sp+g++l++Gshd+ i ++ + ++   +       gh+++++++ +++dg+ ++s s D  +  Wd++ g+ l + +  + ++
   Q: 636  LSVVRYSPDGNFLAVGSHDNFIYIYTVTENGRKYIrfgKCVGHSSFITHLDWSKDGKFIMSNSGDYEILYWDVAGGCKLLRNRF-DSKD 723
           *************************99877777755776779*******************************77776666655.5555 PP
   S: 183  vysls.................fdsngkelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgs.sDgsiriW 249
            ++ s                 ++s+ + + +  +   + l+ +    ++   + + gh + v+ vrf+ nd +l+s + +D si  W
   Q: 724  REWASytcvlgfhvfgeicrlqVKST-QPCNAKTYQHFIYLFIFLkkkKKAPSHMYGGHGSHVTNVRFTHNDSHLISMGgKDTSILQW 810
           55555345555444444433324443.5666667777777666554445555999999********9997776666655599999988 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

FFPLSLSLIS DDSVSAGSST EYPDRLSTVE QRLQTQEDEI TLLKSALADA LRRISFYDEQ 60
IPLLKQQLAG KEPPPLFIAT SASLSTEGRG DHRNPSPGSA VAIQRRNCFA LSSKSNELQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCCCTC TCTCTCTCTC TTTAATTTCA GATGACAGCG TCTCGGCAGG CAGCAGTACG 60
GAATACCCCG ATCGACTCTC CACGGTGGAG CAGCGGCTTC AGACCCAAGA GGATGAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011151	Astyanax mexicanus	74.70	0.00e+00	947.00
IUUC-Dre-027697	Danio rerio	72.11	0.00e+00	999.00
IUUC-Dor-030271	Dipodomys ordii	65.41	0.00e+00	867.00
IUUC-Eca-033995	Equus caballus	66.16	0.00e+00	887.00
IUUC-Gmo-038631	Gadus morhua	70.03	0.00e+00	894.00
IUUC-Gac-042487	Gasterosteus aculeatus	67.48	0.00e+00	892.00
IUUC-Itr-047963	Ictidomys tridecemlineatus	65.76	0.00e+00	885.00
IUUC-Laf-054051	Loxodonta africana	64.67	0.00e+00	902.00
IUUC-Meu-056318	Macropus eugenii	64.12	0.00e+00	743.00
IUUC-Ont-072032	Oreochromis niloticus	65.50	0.00e+00	971.00
IUUC-Oan-073228	Ornithorhynchus anatinus	65.55	0.00e+00	870.00
IUUC-Ola-087269	Oryzias latipes	59.89	0.00e+00	1024.00
IUUC-Oar-090190	Ovis aries	66.01	0.00e+00	904.00
IUUC-Psi-093997	Pelodiscus sinensis	73.11	0.00e+00	998.00
IUUC-Pfo-096045	Poecilia formosa	70.28	0.00e+00	928.00
IUUC-Pca-100221	Procavia capensis	65.02	0.00e+00	868.00
IUUC-Pva-103024	Pteropus vampyrus	66.47	0.00e+00	887.00
IUUC-Rno-105563	Rattus norvegicus	65.61	0.00e+00	899.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence