iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037648

Ensembl Protein ID

ENSFALP00000001239.1

UniProt Accession

U3JEN5; U3JEN5_FICAL

Genbank Protein ID

ENSFALP00000001239

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01010863

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000001180.1	ENSFALT00000001245.1	ENSFALP00000001239.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-46	153.0	181	215
UBD/Beta-Prp	1.30e-63	214.7	94	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 181  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 215
           8*******9659955588999***********886 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++ + tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 94   LSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYgDCDNFATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 181
           8*******************************87669***********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  ++++gh d
   Q: 182  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYSMRGHAD 268
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++riWd+r
   Q: 269  SVTGLSLSSEGSYLLSNAMDNTVRIWDVR 297
           ***************************98 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

PPPPPPPPPP PPPPPPPPPP PPPPPPPPPP PPPPPPPPPP PPPPPPPPPP PPPPPPPGRQ 60
AGHTLALSLV PSRCPRVPQG PPRCSSLQAP IMLLSGHEGE VYCCKFHPNG NTLASAGFDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.84	3.00e-119	421.00
IUUC-Aml-001428	Ailuropoda melanoleuca	96.93	2.00e-166	578.00
IUUC-Atr-003164	Amborella trichopoda	60.13	5.00e-122	430.00
IUUC-Apl-003447	Anas platyrhynchos	98.95	2.00e-163	567.00
IUUC-Aca-004270	Anolis carolinensis	90.94	1.00e-167	582.00
IUUC-Aly-005659	Arabidopsis lyrata	60.12	2.00e-124	438.00
IUUC-Ath-006764	Arabidopsis thaliana	61.09	2.00e-123	435.00
IUUC-Acl-008324	Aspergillus clavatus	48.55	1.00e-92	333.00
IUUC-Afl-008607	Aspergillus flavus	48.99	3.00e-88	318.00
IUUC-Afu-008998	Aspergillus fumigatus	48.23	2.00e-92	332.00
IUUC-Ani-009363	Aspergillus nidulans	48.23	8.00e-94	336.00
IUUC-Ang-009513	Aspergillus niger	47.85	1.00e-83	303.00
IUUC-Aor-010237	Aspergillus oryzae	49.52	9.00e-94	336.00
IUUC-Ate-010374	Aspergillus terreus	45.02	4.00e-81	294.00
IUUC-Ame-010728	Astyanax mexicanus	91.61	2.00e-167	580.00
IUUC-Bgr-012297	Blumeria graminis	46.52	8.00e-70	256.00
IUUC-Bta-012433	Bos taurus	97.07	2.00e-174	604.00
IUUC-Bci-013763	Botrytis cinerea	50.96	9.00e-95	339.00
IUUC-Bdi-014490	Brachypodium distachyon	58.84	1.00e-118	419.00
IUUC-Bol-016479	Brassica oleracea	61.49	6.00e-123	433.00
IUUC-Bra-017219	Brassica rapa	61.41	9.00e-124	436.00
IUUC-Cel-018512	Caenorhabditis elegans	57.19	8.00e-113	399.00
IUUC-Cja-019308	Callithrix jacchus	96.76	8.00e-176	608.00
IUUC-Cfa-020998	Canis familiaris	97.09	7.00e-176	609.00
IUUC-Cpo-021580	Cavia porcellus	97.07	8.00e-175	605.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	54.75	9.00e-108	382.00
IUUC-Csa-023456	Chlorocebus sabaeus	96.76	1.00e-175	608.00
IUUC-Cho-024644	Choloepus hoffmanni	96.77	7.00e-176	608.00
IUUC-Cin-025463	Ciona intestinalis	60.60	6.00e-127	446.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	48.72	3.00e-94	338.00
IUUC-Cne-026780	Cryptococcus neoformans	41.77	3.00e-66	245.00
IUUC-Dre-027671	Danio rerio	89.68	3.00e-174	603.00
IUUC-Dno-029769	Dasypus novemcinctus	97.10	7.00e-177	612.00
IUUC-Dor-030776	Dipodomys ordii	98.45	2.00e-74	271.00
IUUC-Dse-031316	Dothistroma septosporum	43.27	2.00e-83	302.00
IUUC-Dme-031756	Drosophila melanogaster	60.90	2.00e-122	432.00
IUUC-Ete-032753	Echinops telfairi	89.58	2.00e-151	528.00
IUUC-Eca-033979	Equus caballus	97.07	2.00e-174	604.00
IUUC-Eeu-034862	Erinaceus europaeus	95.68	3.00e-70	258.00
IUUC-Fca-036110	Felis catus	97.68	1.00e-145	508.00
IUUC-Fox-037861	Fusarium oxysporum	46.79	3.00e-92	331.00
IUUC-Fso-038405	Fusarium solani	46.79	3.00e-92	331.00
IUUC-Gmo-039383	Gadus morhua	91.69	1.00e-169	588.00
IUUC-Ggr-040082	Gaeumannomyces graminis	44.23	1.00e-80	292.00
IUUC-Gga-040785	Gallus gallus	99.03	2.00e-178	617.00
IUUC-Gac-041645	Gasterosteus aculeatus	91.29	8.00e-168	582.00
IUUC-Gma-044329	Glycine max	59.20	7.00e-123	433.00
IUUC-Ggo-044800	Gorilla gorilla	86.44	6.00e-143	499.00
IUUC-Hsa-045918	Homo sapiens	96.76	1.00e-175	608.00
IUUC-Hvu-047342	Hordeum vulgare	58.52	2.00e-118	418.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	98.24	6.00e-100	356.00
IUUC-Kpa-049149	Komagataella pastoris	33.66	4.00e-36	145.00
IUUC-Lch-050395	Latimeria chalumnae	84.97	2.00e-179	621.00
IUUC-Lpe-051275	Leersia perrieri	59.16	3.00e-119	422.00
IUUC-Loc-052666	Lepisosteus oculatus	92.58	5.00e-165	573.00
IUUC-Lma-053129	Leptosphaeria maculans	44.41	2.00e-84	305.00
IUUC-Laf-054512	Loxodonta africana	97.07	3.00e-174	603.00
IUUC-Mcc-055819	Macaca mulatta	96.76	7.00e-176	609.00
IUUC-Meu-056350	Macropus eugenii	86.97	3.00e-149	521.00
IUUC-Mor-057063	Magnaporthe oryzae	47.76	1.00e-90	326.00
IUUC-Mpo-057369	Magnaporthe poae	45.19	2.00e-81	295.00
IUUC-Mtr-058228	Medicago truncatula	58.59	8.00e-123	432.00
IUUC-Mla-059093	Melampsora laricipopulina	42.72	2.00e-69	255.00
IUUC-Mga-059719	Meleagris gallopavo	97.82	0.00e+00	629.00
IUUC-Mvi-060285	Microbotryum violaceum	40.31	7.00e-63	234.00
IUUC-Mmr-061685	Microcebus murinus	89.97	1.00e-156	545.00
IUUC-Mdo-062121	Monodelphis domestica	97.07	3.00e-173	600.00
IUUC-Mmu-063216	Mus musculus	97.10	1.00e-176	611.00
IUUC-Mac-065463	Musa acuminata	55.95	3.00e-109	387.00
IUUC-Mpu-066390	Mustela putorius furo	97.10	8.00e-177	612.00
IUUC-Mlu-067686	Myotis lucifugus	93.55	1.00e-167	581.00
IUUC-Nfi-068509	Neosartorya fischeri	48.55	1.00e-92	332.00
IUUC-Ncr-068870	Neurospora crassa	48.72	4.00e-93	334.00
IUUC-Nle-069539	Nomascus leucogenys	96.76	9.00e-176	608.00
IUUC-Opr-070555	Ochotona princeps	84.04	1.00e-153	535.00
IUUC-Ont-071490	Oreochromis niloticus	89.49	1.00e-165	575.00
IUUC-Oan-073044	Ornithorhynchus anatinus	86.03	4.00e-147	513.00
IUUC-Ocu-073764	Oryctolagus cuniculus	97.10	2.00e-177	614.00
IUUC-Oba-075704	Oryza barthii	59.16	2.00e-119	421.00
IUUC-Obr-076455	Oryza brachyantha	59.49	5.00e-119	421.00
IUUC-Ogl-077382	Oryza glaberrima	59.49	2.00e-119	421.00
IUUC-Ogu-078739	Oryza glumaepatula	59.16	2.00e-119	421.00
IUUC-Oin-079072	Oryza indica	59.16	2.00e-119	421.00
IUUC-Olo-080809	Oryza longistaminata	59.16	2.00e-119	421.00
IUUC-Ome-081677	Oryza meridionalis	59.16	6.00e-119	420.00
IUUC-Oni-082937	Oryza nivara	59.16	2.00e-119	421.00
IUUC-Opu-083510	Oryza punctata	59.16	2.00e-119	421.00
IUUC-Oru-084360	Oryza rufipogon	59.16	4.00e-119	421.00
IUUC-Osa-085640	Oryza sativa	59.16	3.00e-119	421.00
IUUC-Ola-086504	Oryzias latipes	89.71	4.00e-167	580.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.64	9.00e-63	233.00
IUUC-Oga-088773	Otolemur garnettii	96.76	2.00e-175	607.00
IUUC-Oar-089677	Ovis aries	96.13	6.00e-173	599.00
IUUC-Ptr-090724	Pan troglodytes	96.60	1.00e-166	578.00
IUUC-Pan-092683	Papio anubis	96.76	1.00e-175	608.00
IUUC-Psi-093415	Pelodiscus sinensis	98.70	1.00e-175	608.00
IUUC-Pma-094562	Petromyzon marinus	82.26	3.00e-163	566.00
IUUC-Pno-095014	Phaeosphaeria nodorum	47.30	3.00e-86	311.00
IUUC-Ppa-095822	Physcomitrella patens	59.70	2.00e-121	428.00
IUUC-Pfo-096579	Poecilia formosa	90.97	2.00e-167	581.00
IUUC-Pab-098313	Pongo abelii	96.76	1.00e-175	608.00
IUUC-Pop-099747	Populus trichocarpa	59.82	2.00e-123	435.00
IUUC-Pca-100871	Procavia capensis	82.50	5.00e-127	446.00
IUUC-Ppe-101389	Prunus persica	60.49	2.00e-124	437.00
IUUC-Pva-102468	Pteropus vampyrus	81.11	3.00e-136	477.00
IUUC-Pgr-103523	Puccinia graminis	42.41	8.00e-73	266.00
IUUC-Ptt-103930	Puccinia triticina	42.32	2.00e-72	265.00
IUUC-Pte-104299	Pyrenophora teres	47.27	2.00e-91	328.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	47.91	1.00e-91	329.00
IUUC-Rno-105796	Rattus norvegicus	96.77	6.00e-176	609.00
IUUC-Sha-107191	Sarcophilus harrisii	97.07	3.00e-173	600.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	37.92	2.00e-63	235.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.14	3.00e-78	284.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	50.00	6.00e-94	337.00
IUUC-Sit-110805	Setaria italica	58.84	5.00e-119	421.00
IUUC-Sly-111567	Solanum lycopersicum	61.66	1.00e-126	445.00
IUUC-Stu-112562	Solanum tuberosum	63.02	8.00e-127	446.00
IUUC-Sar-112991	Sorex araneus	95.43	5.00e-118	416.00
IUUC-Sbi-114010	Sorghum bicolor	57.14	1.00e-119	422.00
IUUC-Sre-114947	Sporisorium reilianum	42.37	4.00e-73	268.00
IUUC-Ssc-115371	Sus scrofa	97.07	2.00e-174	604.00
IUUC-Tgu-117429	Taeniopygia guttata	96.74	2.00e-176	611.00
IUUC-Tru-118081	Takifugu rubripes	90.73	2.00e-168	584.00
IUUC-Tsy-119101	Tarsius syrichta	83.82	3.00e-146	510.00
IUUC-Tni-120532	Tetraodon nigroviridis	90.97	2.00e-167	581.00
IUUC-Tca-121373	Theobroma cacao	61.18	1.00e-125	442.00
IUUC-Tre-122050	Trichoderma reesei	46.15	4.00e-91	327.00
IUUC-Tvi-122394	Trichoderma virens	46.28	3.00e-85	308.00
IUUC-Tae-124661	Triticum aestivum	58.97	1.00e-118	418.00
IUUC-Tme-126998	Tuber melanosporum	50.49	2.00e-93	335.00
IUUC-Tbe-128032	Tupaia belangeri	97.09	7.00e-176	609.00
IUUC-Ttr-129102	Tursiops truncatus	85.99	4.00e-147	513.00
IUUC-Uma-129363	Ustilago maydis	42.99	3.00e-76	278.00
IUUC-Vda-129891	Verticillium dahliae	50.49	3.00e-93	334.00
IUUC-Vpa-130827	Vicugna pacos	96.42	2.00e-173	600.00
IUUC-Vvi-131202	Vitis vinifera	59.82	7.00e-125	439.00
IUUC-Xtr-132769	Xenopus tropicalis	92.43	1.00e-162	565.00
IUUC-Xma-133147	Xiphophorus maculatus	90.97	3.00e-167	580.00
IUUC-Yli-134352	Yarrowia lipolytica	33.44	8.00e-36	144.00
IUUC-Zma-135294	Zea mays	58.18	4.00e-119	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence