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Tag Content
UUCD2 ID IUUC-Aml-002242
UUCD1 version UUC-AiM-00853
Ensembl Protein ID ENSAMEP00000017277.1
UniProt Accession G1MD49; G1MD49_AILME
Genbank Protein ID ENSAMEP00000017277
Protein Name Uncharacterized protein
Genbank Nucleotide ID ACTA01112618
Gene Name ATG16L1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMEG00000016324.1 ENSAMET00000017986.1 ENSAMEP00000017277.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.90e-29 99.6 410 449
UBD/Beta-Prp 4.90e-52 177.0 318 609
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
    gH+++v + +f ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 410 GHSGKVLSAKFllDNARIVSGSHDRTLKLWDLRSKVCIKT 449
    8***********64489********************985 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvh 88
    +++++h++ +++v+fsp+++llatg++d+++k+w+v+ k+ slsg +a++t+++f++ + + + ++ k+ l h
   Q: 318 MCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCelKGSLSGSNAGITSIEFDSAQTYELLKHKIFSFKILALGsHHISHH 406
    5899************************************998899*****************98888888877778877763445568 PP
   S: 89 tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
    tl+gh+ +vls +f ++ ++vsGshdrt+++wdl+++ c++++++g + c + +++++++sG+ D+++r+Wd+++++ +r+++
   Q: 407 TLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKIRFWDIRSESTVREME- 490
    999***************************************9999988....888888889*************************6. PP
   S: 178 ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
    ++++ l+++++++el+s+s+d +k+ dl+ + + +t+ + + ++v fsp++ +++ gs++gs++iW + sg++ k+l++
   Q: 491 -LLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGfkcgSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSK 578
    .69******************************9999999998887888777779********************************** PP
   S: 263 hnssvisvavlsfgdnvlvlgsedskvniwk 293
    ++ s+i ++s++++++v++++ sk+ +w+
   Q: 579 QHGSSINAVAWSPSGSHVVSVDKGSKAVLWS 609
    **999999999******************97 PP
   

Organism Ailuropoda melanoleuca
Protein Sequence
(Fasta)
MSSGLRAADD PQTLRGGRPM LFFLDRTLFD IRGLSLQYYN KLLEKSDLHS VLAHKLQAEK 60
HDIPNRHEVW GLSPGHDGAW NDSQQQEMAQ LRIKHQEELT ELHKKRGELA HWVIELKNQM 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aml-002242|E3,WD_repeat;UBD,Beta-Prp|Ailuropoda melanoleuca
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGTCGG GCCTCCGCGC CGCCGACTNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aml-002242|E3,WD_repeat;UBD,Beta-Prp|Ailuropoda melanoleuca
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005930--C:axoneme
GO:0039689--P:negative stranded viral RNA replication

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003073 Amborella trichopoda 28.09 1.00e-26 114.00
IUUC-Apl-003384 Anas platyrhynchos 83.62 0.00e+00 996.00
IUUC-Aca-004962 Anolis carolinensis 77.67 0.00e+00 937.00
IUUC-Aly-005435 Arabidopsis lyrata 26.54 2.00e-39 157.00
IUUC-Ame-010915 Astyanax mexicanus 72.70 6.00e-138 483.00
IUUC-Bta-012388 Bos taurus 85.01 0.00e+00 1046.00
IUUC-Bol-016174 Brassica oleracea 27.82 4.00e-39 155.00
IUUC-Bra-017165 Brassica rapa 26.50 2.00e-39 156.00
IUUC-Cel-018131 Caenorhabditis elegans 28.92 6.00e-54 205.00
IUUC-Cja-018898 Callithrix jacchus 76.99 0.00e+00 881.00
IUUC-Cfa-020484 Canis familiaris 90.18 0.00e+00 1076.00
IUUC-Cpo-022156 Cavia porcellus 85.06 0.00e+00 1011.00
IUUC-Csa-024019 Chlorocebus sabaeus 84.29 0.00e+00 997.00
IUUC-Cho-024311 Choloepus hoffmanni 75.80 0.00e+00 908.00
IUUC-Cin-025260 Ciona intestinalis 34.81 4.00e-87 315.00
IUUC-Csv-025836 Ciona savignyi 45.41 5.00e-48 183.00
IUUC-Dre-027702 Danio rerio 69.31 0.00e+00 804.00
IUUC-Dno-029728 Dasypus novemcinctus 86.78 0.00e+00 1043.00
IUUC-Dor-030587 Dipodomys ordii 90.19 1.00e-100 360.00
IUUC-Dme-031595 Drosophila melanogaster 36.80 4.00e-92 332.00
IUUC-Ete-032969 Echinops telfairi 71.77 0.00e+00 723.00
IUUC-Eca-034214 Equus caballus 92.09 0.00e+00 902.00
IUUC-Eeu-034537 Erinaceus europaeus 85.31 0.00e+00 851.00
IUUC-Fca-036005 Felis catus 89.78 0.00e+00 1048.00
IUUC-Fal-037593 Ficedula albicollis 80.74 0.00e+00 942.00
IUUC-Gmo-039042 Gadus morhua 59.93 4.00e-172 597.00
IUUC-Gga-040986 Gallus gallus 78.15 0.00e+00 976.00
IUUC-Gac-041351 Gasterosteus aculeatus 68.43 0.00e+00 819.00
IUUC-Ggo-045427 Gorilla gorilla 84.39 0.00e+00 1017.00
IUUC-Hsa-046632 Homo sapiens 86.58 0.00e+00 1040.00
IUUC-Itr-048504 Ictidomys tridecemlineatus 82.87 0.00e+00 982.00
IUUC-Lpe-051254 Leersia perrieri 25.61 2.00e-34 140.00
IUUC-Loc-052610 Lepisosteus oculatus 70.95 0.00e+00 821.00
IUUC-Laf-053936 Loxodonta africana 81.77 0.00e+00 1007.00
IUUC-Mcc-055504 Macaca mulatta 81.93 0.00e+00 1035.00
IUUC-Meu-056516 Macropus eugenii 78.98 0.00e+00 909.00
IUUC-Mtr-057981 Medicago truncatula 26.73 8.00e-40 158.00
IUUC-Mga-059777 Meleagris gallopavo 83.45 0.00e+00 986.00
IUUC-Mmr-061298 Microcebus murinus 85.33 0.00e+00 1028.00
IUUC-Mdo-062969 Monodelphis domestica 83.39 0.00e+00 989.00
IUUC-Mmu-064076 Mus musculus 82.59 0.00e+00 988.00
IUUC-Mac-065161 Musa acuminata 26.20 9.00e-38 151.00
IUUC-Mpu-066196 Mustela putorius furo 87.88 0.00e+00 1056.00
IUUC-Mlu-067651 Myotis lucifugus 87.40 0.00e+00 1045.00
IUUC-Nle-069853 Nomascus leucogenys 85.60 0.00e+00 1021.00
IUUC-Opr-070350 Ochotona princeps 92.68 3.00e-115 409.00
IUUC-Ont-072489 Oreochromis niloticus 67.86 0.00e+00 800.00
IUUC-Oan-072703 Ornithorhynchus anatinus 77.20 0.00e+00 881.00
IUUC-Ocu-074205 Oryctolagus cuniculus 82.62 0.00e+00 1016.00
IUUC-Ogu-078052 Oryza glumaepatula 25.24 8.00e-33 134.00
IUUC-Oin-079611 Oryza indica 24.85 5.00e-31 129.00
IUUC-Olo-080408 Oryza longistaminata 25.06 2.00e-30 127.00
IUUC-Oru-084858 Oryza rufipogon 25.05 8.00e-31 128.00
IUUC-Osa-086277 Oryza sativa 25.05 6.00e-31 128.00
IUUC-Ola-086816 Oryzias latipes 67.72 1.00e-92 332.00
IUUC-Olu-087622 Ostreococcus lucimarinus 32.00 1.00e-37 150.00
IUUC-Oga-088765 Otolemur garnettii 84.29 0.00e+00 951.00
IUUC-Oar-090196 Ovis aries 84.51 0.00e+00 941.00
IUUC-Ptr-091676 Pan troglodytes 86.74 0.00e+00 1041.00
IUUC-Pan-092068 Papio anubis 85.19 0.00e+00 1025.00
IUUC-Psi-093367 Pelodiscus sinensis 79.87 0.00e+00 952.00
IUUC-Ppa-095699 Physcomitrella patens 28.35 7.00e-35 141.00
IUUC-Pfo-096067 Poecilia formosa 68.98 0.00e+00 796.00
IUUC-Pab-098111 Pongo abelii 84.39 0.00e+00 1015.00
IUUC-Pop-099116 Populus trichocarpa 25.24 7.00e-41 161.00
IUUC-Pca-100680 Procavia capensis 73.33 0.00e+00 820.00
IUUC-Pva-102871 Pteropus vampyrus 86.78 0.00e+00 993.00
IUUC-Rno-106088 Rattus norvegicus 82.27 0.00e+00 986.00
IUUC-Sha-106984 Sarcophilus harrisii 87.41 0.00e+00 1025.00
IUUC-Smo-108983 Selaginella moellendorffii 25.38 8.00e-40 157.00
IUUC-Sit-110828 Setaria italica 26.89 2.00e-39 156.00
IUUC-Sly-111009 Solanum lycopersicum 26.10 4.00e-43 169.00
IUUC-Stu-112370 Solanum tuberosum 26.67 4.00e-44 172.00
IUUC-Sar-113659 Sorex araneus 76.53 3.00e-84 305.00
IUUC-Ssc-116241 Sus scrofa 88.08 0.00e+00 1006.00
IUUC-Tgu-116576 Taeniopygia guttata 80.36 0.00e+00 1000.00
IUUC-Tru-118336 Takifugu rubripes 62.94 0.00e+00 705.00
IUUC-Tsy-119006 Tarsius syrichta 81.02 0.00e+00 966.00
IUUC-Tni-120300 Tetraodon nigroviridis 69.67 0.00e+00 794.00
IUUC-Tca-121002 Theobroma cacao 27.05 2.00e-44 173.00
IUUC-Tbe-127631 Tupaia belangeri 90.38 0.00e+00 867.00
IUUC-Ttr-129005 Tursiops truncatus 79.63 9.00e-150 523.00
IUUC-Vpa-130246 Vicugna pacos 82.68 0.00e+00 784.00
IUUC-Vvi-130878 Vitis vinifera 33.12 1.00e-39 157.00
IUUC-Xtr-132798 Xenopus tropicalis 70.40 0.00e+00 797.00
IUUC-Xma-133264 Xiphophorus maculatus 68.75 0.00e+00 797.00
Created Date 25-Jun-2017

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