iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050041

Ensembl Protein ID

ENSLACP00000004955.1

UniProt Accession

H3A5N4; H3A5N4_LATCH

Genbank Protein ID

ENSLACP00000004955

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01004700

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000004406.1	ENSLACT00000004999.1	ENSLACP00000004955.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	69.98	0.00e+00	1483.00	IUUC-Hsa-045964
E3 activity/RING/RING	68.97	0.00e+00	1471.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEVPLVSMPL RNMPAELHHP YKKFSEWKFK LFRVRSFEKT DPVEVETSNK ENKPSHAAPL 60
EATPLVIQHK ESAALENIPP AGLKPIFVDN NQLEPNDMKL QTHIANLQRL CRLCGDCLKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGC CCTTAGTGAG CATGCCGCTG CGCAACATGC CCGCAGAACT TCATCACCCA 60
TACAAAAAGT TCTCCGAATG GAAGTTCAAA CTTTTCAGGG TGAGATCGTT TGAGAAAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF00097--zf-C3HC4
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	69.77	0.00e+00	1476.00
IUUC-Apl-003271	Anas platyrhynchos	68.13	0.00e+00	1487.00
IUUC-Aca-004400	Anolis carolinensis	68.70	0.00e+00	1485.00
IUUC-Ame-011295	Astyanax mexicanus	60.88	0.00e+00	1259.00
IUUC-Bta-012421	Bos taurus	70.93	0.00e+00	1501.00
IUUC-Cja-019891	Callithrix jacchus	69.45	0.00e+00	1467.00
IUUC-Cfa-020740	Canis familiaris	66.57	0.00e+00	1427.00
IUUC-Cpo-021800	Cavia porcellus	69.33	0.00e+00	1436.00
IUUC-Csa-024203	Chlorocebus sabaeus	68.83	0.00e+00	1302.00
IUUC-Dre-028416	Danio rerio	60.98	0.00e+00	1254.00
IUUC-Dno-029101	Dasypus novemcinctus	69.44	0.00e+00	1455.00
IUUC-Eca-033385	Equus caballus	69.93	0.00e+00	1489.00
IUUC-Fca-036545	Felis catus	69.93	0.00e+00	1483.00
IUUC-Fal-037208	Ficedula albicollis	68.10	0.00e+00	1478.00
IUUC-Gmo-039622	Gadus morhua	56.54	0.00e+00	1204.00
IUUC-Gga-041182	Gallus gallus	68.36	0.00e+00	1453.00
IUUC-Gac-041682	Gasterosteus aculeatus	60.81	0.00e+00	1246.00
IUUC-Ggo-044510	Gorilla gorilla	69.64	0.00e+00	1482.00
IUUC-Hsa-045964	Homo sapiens	69.98	0.00e+00	1481.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	68.98	0.00e+00	1459.00
IUUC-Loc-052464	Lepisosteus oculatus	64.76	0.00e+00	1425.00
IUUC-Laf-053544	Loxodonta africana	69.34	0.00e+00	1472.00
IUUC-Mcc-054867	Macaca mulatta	70.27	0.00e+00	1484.00
IUUC-Meu-055986	Macropus eugenii	68.57	0.00e+00	1338.00
IUUC-Mga-059262	Meleagris gallopavo	68.16	0.00e+00	1453.00
IUUC-Mdo-062686	Monodelphis domestica	68.41	0.00e+00	1495.00
IUUC-Mmu-064297	Mus musculus	68.97	0.00e+00	1499.00
IUUC-Mpu-066027	Mustela putorius furo	69.36	0.00e+00	1467.00
IUUC-Mlu-067885	Myotis lucifugus	70.07	0.00e+00	1486.00
IUUC-Nle-070073	Nomascus leucogenys	69.57	0.00e+00	1475.00
IUUC-Ont-071400	Oreochromis niloticus	62.23	0.00e+00	1289.00
IUUC-Oan-072920	Ornithorhynchus anatinus	85.06	0.00e+00	712.00
IUUC-Ocu-074616	Oryctolagus cuniculus	70.07	0.00e+00	1472.00
IUUC-Ola-086828	Oryzias latipes	61.18	0.00e+00	1265.00
IUUC-Oga-088675	Otolemur garnettii	79.78	2.00e-134	471.00
IUUC-Oar-090380	Ovis aries	69.66	0.00e+00	1511.00
IUUC-Ptr-090648	Pan troglodytes	69.48	0.00e+00	1479.00
IUUC-Pan-092036	Papio anubis	70.17	0.00e+00	1481.00
IUUC-Psi-093130	Pelodiscus sinensis	70.76	0.00e+00	1544.00
IUUC-Pfo-097273	Poecilia formosa	59.72	0.00e+00	1242.00
IUUC-Pca-100134	Procavia capensis	65.49	0.00e+00	1381.00
IUUC-Rno-105632	Rattus norvegicus	69.40	0.00e+00	1509.00
IUUC-Sha-107238	Sarcophilus harrisii	68.68	0.00e+00	1495.00
IUUC-Sar-113591	Sorex araneus	61.84	0.00e+00	1283.00
IUUC-Ssc-115720	Sus scrofa	69.30	0.00e+00	1472.00
IUUC-Tgu-117030	Taeniopygia guttata	69.25	0.00e+00	1483.00
IUUC-Tru-117669	Takifugu rubripes	58.85	0.00e+00	1185.00
IUUC-Tsy-119578	Tarsius syrichta	68.34	0.00e+00	1446.00
IUUC-Tni-120073	Tetraodon nigroviridis	58.16	0.00e+00	1219.00
IUUC-Tbe-128029	Tupaia belangeri	57.12	0.00e+00	637.00
IUUC-Ttr-128677	Tursiops truncatus	79.57	0.00e+00	696.00
IUUC-Vpa-130346	Vicugna pacos	83.52	0.00e+00	793.00
IUUC-Xtr-132442	Xenopus tropicalis	84.10	3.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence