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Tag Content
iUUCD ID IUUC-Cgl-026538
Ensembl Protein ID ELA34671
UniProt Accession L2G8P9; L2G8P9_COLGN
Genbank Protein ID ELA34671.1
Protein Name U4 u6 small nuclear ribonucleoprotein prp4
Genbank Nucleotide ID KB020600
Gene Name CGGC5_5516
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
CGGC5_5516 ELA34671 ELA34671
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.30e-31 105.0 858 888
UBD/Beta-Prp 4.20e-51 173.5 636 808
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
    gH+++v++++ d + +vsG++D t+k+W
   Q: 858 GHAGPVSSVDVsRDgKWIVSGGHDRTVKLWG 888
    8***********888***************6 PP
   


   UBD/Beta-Prp

   S: 61   spdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtv 161
    sp++ l++g+ +++++w l++ ++++tl+gh+++v ++f+psg +++s+s+d t r+wd+et +l +++gh++ v v+++ dg+ll+s++lD++
   Q: 636 SPSTVNLASGGAEGVVHLWGLEQDTPLSTLSGHSARVSRVEFHPSGRYVASASDDTTWRLWDVETTAELL-LQEGHSRGVYAVSFNADGSLLASAGLDSIG 735
    55666799**************************************************************.****************************** PP
   S: 162 rlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnde 235
    r+Wdl++g+ + l + h +++y l++ s+g +++sgs dg vk wd+++ + l +ht+ v+++r ++ ++
   Q: 736 RIWDLRSGRTVMILDE-HIQPIYALDWGSDGHRVLSGSADGWVKCWDVRKVQRTANLGAHTKAVSDLRWFKGTD 808
    **************99.**********************************99************999886554 PP
   

Organism Colletotrichum gloeosporioides
Protein Sequence
(Fasta)
MPSDEENPVL WGSPAQTGAA FDFRSDVVTT PSQGMLLAIA RTTLHDDVYG EDSTTKNFEE 60
EMAKTCGHES AAFVLSGTMA NQLAIRSLLH QPPHAVLADA SAHIIHWEAG GVAHLSGAMV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cgl-026538|E3,WD_repeat;UBD,Beta-Prp|Colletotrichum gloeosporioides
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCCGAGCG ACGAGGAAAA CCCAGTGCTT TGGGGCTCGC CCGCGCAAAC AGGCGCGGCC 60
TTCGATTTCC GAAGTAAGTC CCAGCCGGAG TCCAACCGAG GAGGGGGCAT TTGACCCGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cgl-026538|E3,WD_repeat;UBD,Beta-Prp|Colletotrichum gloeosporioides
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR001597--ArAA_b-elim_lyase/Thr_aldolase
IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015424--PyrdxlP-dep_Trfase
IPR015421--PyrdxlP-dep_Trfase_major_sub1
IPR015422--PyrdxlP-dep_Trfase_sub2
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01212--Beta_elim_lyase
PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid
GO:0016829--F:lyase activity
GO:0006520--P:cellular amino acid metabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000771 Aegilops tauschii 37.22 4.00e-78 283.00
IUUC-Aml-001737 Ailuropoda melanoleuca 37.72 5.00e-93 333.00
IUUC-Atr-002828 Amborella trichopoda 35.23 2.00e-80 291.00
IUUC-Apl-003723 Anas platyrhynchos 37.93 8.00e-94 335.00
IUUC-Aca-004972 Anolis carolinensis 37.50 1.00e-92 332.00
IUUC-Aly-006531 Arabidopsis lyrata 34.68 3.00e-65 240.00
IUUC-Ath-007367 Arabidopsis thaliana 34.86 9.00e-78 282.00
IUUC-Ago-007893 Ashbya gossypii 37.70 4.00e-73 266.00
IUUC-Acl-008236 Aspergillus clavatus 61.01 2.00e-173 600.00
IUUC-Afl-008522 Aspergillus flavus 63.46 3.00e-178 616.00
IUUC-Afu-008904 Aspergillus fumigatus 61.80 2.00e-176 610.00
IUUC-Ani-009198 Aspergillus nidulans 62.81 0.00e+00 636.00
IUUC-Ang-009662 Aspergillus niger 60.27 2.00e-177 613.00
IUUC-Aor-009881 Aspergillus oryzae 62.24 5.00e-178 615.00
IUUC-Ate-010333 Aspergillus terreus 61.81 2.00e-167 580.00
IUUC-Ame-011697 Astyanax mexicanus 39.44 5.00e-97 346.00
IUUC-Bgr-012254 Blumeria graminis 64.99 0.00e+00 679.00
IUUC-Bta-012615 Bos taurus 37.72 2.00e-93 334.00
IUUC-Bci-013720 Botrytis cinerea 67.95 0.00e+00 710.00
IUUC-Bdi-014302 Brachypodium distachyon 36.23 4.00e-81 293.00
IUUC-Bol-015594 Brassica oleracea 34.22 8.00e-68 249.00
IUUC-Bra-016645 Brassica rapa 36.13 2.00e-66 244.00
IUUC-Cel-018632 Caenorhabditis elegans 33.26 2.00e-70 258.00
IUUC-Cja-019747 Callithrix jacchus 37.72 2.00e-93 334.00
IUUC-Cfa-020288 Canis familiaris 37.72 3.00e-93 333.00
IUUC-Cpo-021440 Cavia porcellus 37.72 5.00e-93 333.00
IUUC-Cre-022716 Chlamydomonas reinhardtii 35.17 1.00e-57 214.00
IUUC-Csa-023139 Chlorocebus sabaeus 35.59 1.00e-69 254.00
IUUC-Cho-024481 Choloepus hoffmanni 36.42 2.00e-86 310.00
IUUC-Cin-025106 Ciona intestinalis 36.91 2.00e-87 314.00
IUUC-Csv-026087 Ciona savignyi 36.48 9.00e-86 308.00
IUUC-Cne-026793 Cryptococcus neoformans 41.37 9.00e-108 382.00
IUUC-Dre-028723 Danio rerio 39.22 8.00e-95 338.00
IUUC-Dno-029299 Dasypus novemcinctus 37.28 1.00e-92 332.00
IUUC-Dse-031562 Dothistroma septosporum 57.06 1.00e-166 578.00
IUUC-Dme-031783 Drosophila melanogaster 34.77 7.00e-76 276.00
IUUC-Ete-032669 Echinops telfairi 37.72 5.00e-93 333.00
IUUC-Eca-033566 Equus caballus 37.72 5.00e-93 333.00
IUUC-Eeu-034524 Erinaceus europaeus 40.43 1.00e-55 208.00
IUUC-Fca-036215 Felis catus 37.72 3.00e-93 333.00
IUUC-Fal-037018 Ficedula albicollis 39.21 4.00e-81 293.00
IUUC-Fox-037936 Fusarium oxysporum 75.82 0.00e+00 786.00
IUUC-Fso-038366 Fusarium solani 75.96 0.00e+00 816.00
IUUC-Gmo-038966 Gadus morhua 33.77 1.00e-58 218.00
IUUC-Ggr-039942 Gaeumannomyces graminis 68.63 0.00e+00 721.00
IUUC-Gga-040797 Gallus gallus 37.93 5.00e-94 336.00
IUUC-Gac-042598 Gasterosteus aculeatus 36.44 8.00e-79 285.00
IUUC-Gma-044220 Glycine max 35.38 3.00e-76 277.00
IUUC-Ggo-044682 Gorilla gorilla 37.93 5.00e-94 336.00
IUUC-Hsa-045804 Homo sapiens 37.93 2.00e-94 338.00
IUUC-Hvu-047567 Hordeum vulgare 35.84 7.00e-73 266.00
IUUC-Itr-047882 Ictidomys tridecemlineatus 37.50 6.00e-93 332.00
IUUC-Kpa-049369 Komagataella pastoris 35.26 9.00e-67 245.00
IUUC-Lch-050074 Latimeria chalumnae 35.19 6.00e-81 293.00
IUUC-Lpe-051333 Leersia perrieri 36.50 6.00e-76 276.00
IUUC-Loc-052164 Lepisosteus oculatus 37.72 6.00e-95 339.00
IUUC-Lma-053088 Leptosphaeria maculans 58.24 2.00e-167 580.00
IUUC-Laf-053460 Loxodonta africana 37.72 2.00e-93 334.00
IUUC-Mcc-055859 Macaca mulatta 37.72 3.00e-93 333.00
IUUC-Meu-056134 Macropus eugenii 37.93 3.00e-94 337.00
IUUC-Mor-057251 Magnaporthe oryzae 66.42 0.00e+00 684.00
IUUC-Mpo-057375 Magnaporthe poae 75.19 1.00e-117 414.00
IUUC-Mtr-058546 Medicago truncatula 34.21 8.00e-71 259.00
IUUC-Mla-059145 Melampsora laricipopulina 42.27 5.00e-103 365.00
IUUC-Mga-059855 Meleagris gallopavo 37.93 5.00e-94 336.00
IUUC-Mvi-060372 Microbotryum violaceum 40.15 4.00e-84 303.00
IUUC-Mmr-060826 Microcebus murinus 38.15 1.00e-93 335.00
IUUC-Mdo-062748 Monodelphis domestica 37.72 3.00e-94 337.00
IUUC-Mmu-063351 Mus musculus 37.72 5.00e-93 333.00
IUUC-Mac-064846 Musa acuminata 34.48 5.00e-70 256.00
IUUC-Mpu-066006 Mustela putorius furo 37.72 3.00e-93 333.00
IUUC-Mlu-067398 Myotis lucifugus 37.72 5.00e-93 333.00
IUUC-Nfi-068399 Neosartorya fischeri 61.80 0.00e+00 641.00
IUUC-Ncr-068711 Neurospora crassa 70.94 0.00e+00 764.00
IUUC-Nle-069982 Nomascus leucogenys 37.72 2.00e-93 334.00
IUUC-Opr-070596 Ochotona princeps 37.93 7.00e-94 335.00
IUUC-Ont-072374 Oreochromis niloticus 38.58 4.00e-85 306.00
IUUC-Oan-073166 Ornithorhynchus anatinus 34.83 8.00e-74 268.00
IUUC-Ocu-074371 Oryctolagus cuniculus 37.93 9.00e-94 335.00
IUUC-Oba-075083 Oryza barthii 35.12 2.00e-77 281.00
IUUC-Obr-076405 Oryza brachyantha 36.73 4.00e-76 276.00
IUUC-Ogl-077683 Oryza glaberrima 35.74 7.00e-78 282.00
IUUC-Ogu-078486 Oryza glumaepatula 35.67 2.00e-77 281.00
IUUC-Oin-079679 Oryza indica 35.74 2.00e-80 291.00
IUUC-Olo-080243 Oryza longistaminata 34.20 2.00e-63 234.00
IUUC-Ome-081230 Oryza meridionalis 35.67 2.00e-80 291.00
IUUC-Oni-082961 Oryza nivara 35.67 2.00e-80 291.00
IUUC-Opu-083189 Oryza punctata 35.46 5.00e-78 283.00
IUUC-Oru-084353 Oryza rufipogon 36.64 7.00e-79 285.00
IUUC-Osa-085458 Oryza sativa 35.67 2.00e-80 291.00
IUUC-Ola-086940 Oryzias latipes 39.02 9.00e-90 322.00
IUUC-Olu-087580 Ostreococcus lucimarinus 33.73 3.00e-52 197.00
IUUC-Oga-088703 Otolemur garnettii 35.99 4.00e-84 303.00
IUUC-Oar-089829 Ovis aries 37.72 3.00e-93 333.00
IUUC-Ptr-090838 Pan troglodytes 37.93 2.00e-94 338.00
IUUC-Pan-092261 Papio anubis 37.63 1.00e-91 328.00
IUUC-Psi-093020 Pelodiscus sinensis 37.28 7.00e-94 336.00
IUUC-Pno-094858 Phaeosphaeria nodorum 55.71 4.00e-154 536.00
IUUC-Ppa-095531 Physcomitrella patens 34.89 4.00e-83 300.00
IUUC-Pfo-096812 Poecilia formosa 34.96 7.00e-69 253.00
IUUC-Pab-097805 Pongo abelii 32.89 3.00e-69 253.00
IUUC-Pop-100051 Populus trichocarpa 33.81 1.00e-74 272.00
IUUC-Pca-100152 Procavia capensis 37.72 3.00e-93 333.00
IUUC-Ppe-101244 Prunus persica 35.77 6.00e-76 276.00
IUUC-Pva-102529 Pteropus vampyrus 36.42 2.00e-86 311.00
IUUC-Pgr-103550 Puccinia graminis 42.32 4.00e-110 389.00
IUUC-Ptt-103951 Puccinia triticina 39.53 2.00e-93 334.00
IUUC-Pte-104151 Pyrenophora teres 58.57 8.00e-162 561.00
IUUC-Pyt-104571 Pyrenophora triticirepentis 58.38 2.00e-163 566.00
IUUC-Rno-105747 Rattus norvegicus 37.72 9.00e-93 332.00
IUUC-Sce-106418 Saccharomyces cerevisiae 33.00 2.00e-72 264.00
IUUC-Sha-107334 Sarcophilus harrisii 37.93 2.00e-94 337.00
IUUC-Sja-107794 Schizosaccharomyces japonicus 36.65 5.00e-77 280.00
IUUC-Spo-108189 Schizosaccharomyces pombe 39.84 2.00e-90 324.00
IUUC-Ssl-108550 Sclerotinia sclerotiorum 67.76 0.00e+00 720.00
IUUC-Smo-109578 Selaginella moellendorffii 33.92 3.00e-82 297.00
IUUC-Sit-110102 Setaria italica 35.19 4.00e-79 286.00
IUUC-Sly-111668 Solanum lycopersicum 35.17 5.00e-73 266.00
IUUC-Stu-111928 Solanum tuberosum 35.17 3.00e-73 267.00
IUUC-Sar-113266 Sorex araneus 31.68 4.00e-71 260.00
IUUC-Sbi-114134 Sorghum bicolor 35.39 6.00e-79 286.00
IUUC-Sre-115114 Sporisorium reilianum 44.62 6.00e-109 385.00
IUUC-Ssc-115443 Sus scrofa 37.72 2.00e-93 334.00
IUUC-Tgu-117157 Taeniopygia guttata 37.50 3.00e-93 333.00
IUUC-Tru-118587 Takifugu rubripes 37.67 6.00e-87 313.00
IUUC-Tsy-119157 Tarsius syrichta 36.41 4.00e-75 273.00
IUUC-Tni-120427 Tetraodon nigroviridis 38.80 6.00e-91 326.00
IUUC-Tca-121368 Theobroma cacao 33.20 8.00e-77 279.00
IUUC-Tre-122074 Trichoderma reesei 73.46 0.00e+00 787.00
IUUC-Tvi-122349 Trichoderma virens 73.13 0.00e+00 782.00
IUUC-Tae-125651 Triticum aestivum 36.64 4.00e-79 286.00
IUUC-Tur-126532 Triticum urartu 39.73 3.00e-69 254.00
IUUC-Tme-126951 Tuber melanosporum 54.88 2.00e-155 540.00
IUUC-Tbe-128136 Tupaia belangeri 35.34 2.00e-81 294.00
IUUC-Ttr-129169 Tursiops truncatus 39.86 1.00e-56 212.00
IUUC-Uma-129399 Ustilago maydis 41.95 3.00e-105 373.00
IUUC-Vda-129842 Verticillium dahliae 82.95 0.00e+00 853.00
IUUC-Vpa-130440 Vicugna pacos 37.72 2.00e-93 334.00
IUUC-Vvi-131075 Vitis vinifera 35.86 2.00e-75 275.00
IUUC-Xma-133002 Xiphophorus maculatus 38.06 6.00e-69 252.00
IUUC-Yli-134569 Yarrowia lipolytica 37.45 3.00e-79 286.00
IUUC-Zma-135799 Zea mays 33.66 1.00e-73 269.00
Created Date 25-Jun-2017

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