iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014212

Ensembl Protein ID

BRADI1G29980.1

UniProt Accession

I1GV93; I1GV93_BRADI

Genbank Protein ID

KQK16687.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100845367; BRADI_1g29980

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G29980	BRADI1G29980.1	BRADI1G29980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-20	72.5	47	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H + v+ ++f s+  ll+sGsdD  i++W++ +g +
   Q: 47   HRGCVNTISFnSSgSLLLSGSDDQYIMLWNWEKGEP 82
           999*******95569***************998876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPAEGTRMAG LWEREVGRLP PKRFANAVMA SKDFVQSLSI HKRLRKHRGC VNTISFNSSG 60
SLLLSGSDDQ YIMLWNWEKG EPTLKFYTGH DNNVLYAQFM PFSDDRSIIS SGADGQVRHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCGG AGGGGACGAG GATGGCGGGG CTGTGGGAGC GGGAGGTCGG CCGCCTCCCG 60
CCCAAGCGCT TCGCCAACGC CGTCATGGCC TCCAAGGTCC GTCGTCCAAC CCCCCCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

bdi:100845367

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000451	Aegilops tauschii	66.76	3.00e-144	504.00
IUUC-Dme-032115	Drosophila melanogaster	34.13	6.00e-55	208.00
IUUC-Hvu-047472	Hordeum vulgare	67.84	8.00e-155	539.00
IUUC-Lpe-051029	Leersia perrieri	67.57	3.00e-162	565.00
IUUC-Oan-073632	Ornithorhynchus anatinus	25.00	3.00e-14	72.40
IUUC-Oba-075210	Oryza barthii	68.83	3.00e-162	564.00
IUUC-Obr-076559	Oryza brachyantha	60.73	9.00e-137	479.00
IUUC-Ogl-076983	Oryza glaberrima	68.05	3.00e-163	567.00
IUUC-Ogu-078700	Oryza glumaepatula	68.29	1.00e-163	568.00
IUUC-Oin-080109	Oryza indica	68.29	4.00e-164	570.00
IUUC-Olo-080889	Oryza longistaminata	68.08	2.00e-161	560.00
IUUC-Oni-083050	Oryza nivara	68.83	3.00e-162	564.00
IUUC-Opu-083676	Oryza punctata	69.54	2.00e-162	566.00
IUUC-Oru-084681	Oryza rufipogon	68.29	1.00e-163	568.00
IUUC-Osa-086027	Oryza sativa	68.29	5.00e-164	570.00
IUUC-Sit-110699	Setaria italica	67.77	1.00e-167	582.00
IUUC-Sbi-113849	Sorghum bicolor	66.75	4.00e-157	546.00
IUUC-Tae-125605	Triticum aestivum	69.00	4.00e-160	557.00
IUUC-Tur-126059	Triticum urartu	67.20	1.00e-144	505.00
IUUC-Ttr-128231	Tursiops truncatus	33.08	5.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence