iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050029

Ensembl Protein ID

ENSLACP00000011480.1

UniProt Accession

H3APA9; H3APA9_LATCH

Genbank Protein ID

ENSLACP00000011480

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01100221

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010099.1	ENSLACT00000011568.1	ENSLACP00000011480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-09	38.4	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C + +             +  ss ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCANDIfqasnplwqsrGTSTMSSGGRFRCPSCR 82
           *************************866667778888999888889**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MNFAVGYKSM LGEVNAMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ANDIFQASNP 60
LWQSRGTSTM SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPIHSKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGAAGACT GGAACAAAAG TGTTGCTAAA ATTAACCAGC CTTTCCGATG AGATAGCCAC 60
TGTCGAAAAG GGAGTCTCAG TCAGAGGACA GACAGAGTCC CGCACTGCTG AGTTCCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

lcm:102350002

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012082	Blumeria graminis	32.10	8.00e-09	56.20
IUUC-Bta-013385	Bos taurus	78.66	5.00e-146	509.00
IUUC-Cfa-020995	Canis familiaris	78.35	4.00e-138	484.00
IUUC-Cpo-021913	Cavia porcellus	76.58	1.00e-147	515.00
IUUC-Csa-023342	Chlorocebus sabaeus	77.78	6.00e-142	496.00
IUUC-Cin-025224	Ciona intestinalis	52.56	2.00e-98	352.00
IUUC-Csv-026374	Ciona savignyi	54.45	1.00e-88	318.00
IUUC-Dre-027562	Danio rerio	70.82	1.00e-147	515.00
IUUC-Dno-029582	Dasypus novemcinctus	77.44	2.00e-140	492.00
IUUC-Dor-031139	Dipodomys ordii	78.35	1.00e-152	531.00
IUUC-Eca-033645	Equus caballus	77.18	2.00e-145	508.00
IUUC-Fca-035865	Felis catus	78.05	3.00e-149	521.00
IUUC-Fal-036978	Ficedula albicollis	77.58	6.00e-161	560.00
IUUC-Gga-040452	Gallus gallus	80.49	1.00e-155	542.00
IUUC-Ggo-044467	Gorilla gorilla	68.80	2.00e-135	475.00
IUUC-Hsa-046379	Homo sapiens	77.48	3.00e-141	494.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	77.44	4.00e-147	514.00
IUUC-Loc-051801	Lepisosteus oculatus	84.78	2.00e-145	507.00
IUUC-Laf-054215	Loxodonta africana	77.48	4.00e-153	533.00
IUUC-Mcc-055027	Macaca mulatta	68.80	3.00e-135	474.00
IUUC-Meu-056412	Macropus eugenii	78.79	1.00e-140	492.00
IUUC-Mmr-060920	Microcebus murinus	78.08	1.00e-146	512.00
IUUC-Mdo-062832	Monodelphis domestica	78.18	7.00e-140	489.00
IUUC-Mmu-063707	Mus musculus	78.05	6.00e-144	503.00
IUUC-Mlu-067653	Myotis lucifugus	63.80	7.00e-109	386.00
IUUC-Nle-069020	Nomascus leucogenys	72.80	5.00e-142	496.00
IUUC-Opr-070577	Ochotona princeps	62.16	8.00e-115	406.00
IUUC-Ont-072491	Oreochromis niloticus	64.22	5.00e-125	440.00
IUUC-Oan-073101	Ornithorhynchus anatinus	77.95	5.00e-147	513.00
IUUC-Ocu-074454	Oryctolagus cuniculus	78.68	5.00e-145	506.00
IUUC-Oga-088361	Otolemur garnettii	77.78	5.00e-142	496.00
IUUC-Ptr-090785	Pan troglodytes	68.80	3.00e-135	474.00
IUUC-Pan-092344	Papio anubis	77.48	2.00e-141	495.00
IUUC-Pab-098322	Pongo abelii	70.33	3.00e-133	468.00
IUUC-Rno-105134	Rattus norvegicus	77.18	4.00e-151	527.00
IUUC-Sha-106768	Sarcophilus harrisii	78.18	1.00e-150	525.00
IUUC-Tgu-117494	Taeniopygia guttata	76.88	6.00e-152	529.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence