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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105999
Ensembl Protein ID ENSRNOP00000074395.1
UniProt Accession P58405; STRN3_RAT
Genbank Protein ID AAK07683.1
Protein Name Striatin-3; Cell cycle autoantigen SG2NA; S/G2 antigen
Genbank Nucleotide ID AABR03048613
Gene Name Strn3; Gs2na; Sg2na
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000060335.1 ENSRNOT00000077578.1 ENSRNOP00000074395.1
ENSRNOG00000060335.1 ENSRNOT00000088720.1 ENSRNOP00000071600.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IIDPINAMentha
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.70e-26 90.1 582 612
UBD/Beta-Prp 1.80e-47 162.3 572 791
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDl 30
           Htd v++la+s+  + l+s+s Dgti++W++
   Q: 582  HTDAVWGLAYSGikNQLLSCSADGTIRLWNP 612
           **********666689*************95 PP
   

   UBD/Beta-Prp
   S: 41   tgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsv..lslsfsp.sgdklvsGshdrtirvwdlet 125
           +  l  +l  h+++v+ + +s  ++ l+++s D+ti++w+++ + +c+ t++g ++    +s++f   +  ++v+  +   + ++dlet
   Q: 572  SHVLAGTLVAHTDAVWGLAYSGIKNQLLSCSADGTIRLWNPQeKLPCICTYNGDKEHGipTSVDFIGcDPAHMVTSFNTGSAIIYDLET 660
           55678899*******************************887699*******7655541245555554449****************** PP
   S: 126  gqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
            q l           + +  +n vv+hp+  + ++++ Dr ++++d ktgk+++ +   h d+v+sl++d+ng +l+sgs+d +++lw+
   Q: 661  SQSLVMlssqvdSGLQSSNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMVA-HLDAVTSLAVDPNGIYLMSGSHDCSIRLWN 748
           ****9988996633334556899999**99**************************98.****************************** PP
   S: 209  lqtgecvrtlnght....dnvksvrfspnderlvsgssDgsir 247
           l +++cv++ ++h+    + +++v+f+p + +++s+++D   +
   Q: 749  LDSKTCVQEITAHRkkldESIYDVAFHPSKAYIASAGADALAK 791
           **************99999*******************97655 PP
   
Organism Rattus norvegicus
Functional Description
(View)

Functional Description


     Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein (By similarity).
 Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein (By similarity).
Protein Sequence
(Fasta)
MDELAGGGGG QGMAVPPRPQ QGPGGNLSLP PGANGAPGGG GPPAAETAGP PAGPELSRPQ 60
QYTIPGILHY IQHEWARFEM ERAHWEVERA ELQARIAFLQ GERKGQENLK KDLVRRIKML 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105999|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGCAGATGG AGGAGGGACT GTAATGGCGG CGGCCGGCAG CTCCCTGCTC TGATCCGCGG 60
CAAGCACACC GCAGCGACCC CCTCCCCGGC CCTCTCCCGG CCGGACCCCC GCCCTGCCGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105999|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0025--Alternative splicing
KW-0112--Calmodulin-binding
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0472--Membrane
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08232--Striatin
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005737--C:cytoplasm
GO:0030425--C:dendrite
GO:0005794--C:Golgi apparatus
GO:0043025--C:neuronal cell body
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:0043234--C:protein complex
GO:0000159--C:protein phosphatase type 2A complex
GO:0032403--F:protein complex binding
GO:0033147--P:negative regulation of intracellular estrogen receptor signaling pathway
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0032355--P:response to estradiol
KEGG rno:114520
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002046 Ailuropoda melanoleuca 93.79 0.00e+00 1326.00
IUUC-Apl-003472 Anas platyrhynchos 92.51 0.00e+00 1240.00
IUUC-Aca-005286 Anolis carolinensis 91.54 0.00e+00 1285.00
IUUC-Afl-008585 Aspergillus flavus 27.88 2.00e-36 147.00
IUUC-Ani-009405 Aspergillus nidulans 29.92 4.00e-36 146.00
IUUC-Aor-009982 Aspergillus oryzae 28.11 2.00e-36 147.00
IUUC-Bgr-012143 Blumeria graminis 25.67 6.00e-35 142.00
IUUC-Bta-012797 Bos taurus 93.85 0.00e+00 1372.00
IUUC-Bci-013742 Botrytis cinerea 25.23 2.00e-35 144.00
IUUC-Cel-018443 Caenorhabditis elegans 39.88 2.00e-101 363.00
IUUC-Cja-018786 Callithrix jacchus 94.75 0.00e+00 1351.00
IUUC-Cfa-021098 Canis familiaris 91.80 0.00e+00 1296.00
IUUC-Cpo-022357 Cavia porcellus 92.74 0.00e+00 1312.00
IUUC-Csa-023725 Chlorocebus sabaeus 95.14 0.00e+00 1355.00
IUUC-Cho-024338 Choloepus hoffmanni 89.19 0.00e+00 1170.00
IUUC-Cin-025167 Ciona intestinalis 49.28 0.00e+00 655.00
IUUC-Csv-026143 Ciona savignyi 51.54 0.00e+00 679.00
IUUC-Cgl-026487 Colletotrichum gloeosporioides 25.89 2.00e-31 130.00
IUUC-Cne-026783 Cryptococcus neoformans 32.51 2.00e-56 214.00
IUUC-Dno-029926 Dasypus novemcinctus 94.47 0.00e+00 1349.00
IUUC-Dse-031486 Dothistroma septosporum 27.48 7.00e-38 152.00
IUUC-Dme-032158 Drosophila melanogaster 63.32 6.00e-142 498.00
IUUC-Ete-032770 Echinops telfairi 81.13 0.00e+00 1119.00
IUUC-Eca-033309 Equus caballus 94.49 0.00e+00 1337.00
IUUC-Eeu-034939 Erinaceus europaeus 91.28 0.00e+00 984.00
IUUC-Fca-035719 Felis catus 92.11 0.00e+00 1205.00
IUUC-Fal-037408 Ficedula albicollis 92.07 0.00e+00 1183.00
IUUC-Fox-037678 Fusarium oxysporum 26.08 8.00e-36 145.00
IUUC-Fso-038364 Fusarium solani 25.81 5.00e-37 149.00
IUUC-Gmo-039653 Gadus morhua 63.32 0.00e+00 880.00
IUUC-Ggr-039846 Gaeumannomyces graminis 26.02 5.00e-34 139.00
IUUC-Gga-041218 Gallus gallus 93.15 0.00e+00 1325.00
IUUC-Gac-042142 Gasterosteus aculeatus 71.60 0.00e+00 1059.00
IUUC-Ggo-045607 Gorilla gorilla 78.71 0.00e+00 1040.00
IUUC-Hsa-045717 Homo sapiens 95.28 0.00e+00 1360.00
IUUC-Itr-048177 Ictidomys tridecemlineatus 96.54 0.00e+00 962.00
IUUC-Lch-050441 Latimeria chalumnae 89.52 0.00e+00 1333.00
IUUC-Loc-052193 Lepisosteus oculatus 85.83 0.00e+00 1257.00
IUUC-Lma-053183 Leptosphaeria maculans 28.83 1.00e-39 159.00
IUUC-Laf-053964 Loxodonta africana 93.48 0.00e+00 1327.00
IUUC-Mcc-055639 Macaca mulatta 95.15 0.00e+00 1357.00
IUUC-Mor-057148 Magnaporthe oryzae 42.31 1.00e-17 85.50
IUUC-Mpo-057337 Magnaporthe poae 25.33 2.00e-30 127.00
IUUC-Mla-058988 Melampsora laricipopulina 35.05 1.00e-64 241.00
IUUC-Mmr-061084 Microcebus murinus 95.01 0.00e+00 1354.00
IUUC-Mdo-063016 Monodelphis domestica 94.02 0.00e+00 1359.00
IUUC-Mmu-063914 Mus musculus 98.25 0.00e+00 1404.00
IUUC-Mpu-066348 Mustela putorius furo 86.41 0.00e+00 1216.00
IUUC-Mlu-067303 Myotis lucifugus 92.19 0.00e+00 1286.00
IUUC-Nle-070032 Nomascus leucogenys 95.28 0.00e+00 1361.00
IUUC-Opr-070496 Ochotona princeps 90.24 0.00e+00 648.00
IUUC-Ont-072075 Oreochromis niloticus 70.82 0.00e+00 1038.00
IUUC-Oan-072822 Ornithorhynchus anatinus 92.06 0.00e+00 1184.00
IUUC-Ocu-073876 Oryctolagus cuniculus 92.25 0.00e+00 1316.00
IUUC-Ola-086321 Oryzias latipes 68.88 0.00e+00 993.00
IUUC-Oga-088045 Otolemur garnettii 95.26 0.00e+00 1352.00
IUUC-Oar-089737 Ovis aries 94.33 0.00e+00 1261.00
IUUC-Ptr-090871 Pan troglodytes 95.16 0.00e+00 1280.00
IUUC-Pan-092139 Papio anubis 94.17 0.00e+00 1256.00
IUUC-Psi-093424 Pelodiscus sinensis 92.50 0.00e+00 1254.00
IUUC-Pma-094286 Petromyzon marinus 69.69 0.00e+00 673.00
IUUC-Pno-094905 Phaeosphaeria nodorum 28.16 1.00e-35 145.00
IUUC-Pfo-096564 Poecilia formosa 72.05 0.00e+00 1065.00
IUUC-Pab-098626 Pongo abelii 95.28 0.00e+00 1396.00
IUUC-Pva-102445 Pteropus vampyrus 87.70 0.00e+00 1243.00
IUUC-Ptt-103828 Puccinia triticina 36.50 4.00e-48 187.00
IUUC-Pte-104374 Pyrenophora teres 28.11 2.00e-33 138.00
IUUC-Pyt-104568 Pyrenophora triticirepentis 27.88 7.00e-37 149.00
IUUC-Sha-106786 Sarcophilus harrisii 92.64 0.00e+00 1266.00
IUUC-Ssl-108495 Sclerotinia sclerotiorum 26.08 4.00e-35 143.00
IUUC-Sar-113296 Sorex araneus 74.56 0.00e+00 837.00
IUUC-Sre-115115 Sporisorium reilianum 34.70 1.00e-63 238.00
IUUC-Tgu-117199 Taeniopygia guttata 88.84 0.00e+00 1162.00
IUUC-Tsy-119356 Tarsius syrichta 79.34 0.00e+00 947.00
IUUC-Tre-122113 Trichoderma reesei 27.27 1.00e-38 154.00
IUUC-Tvi-122312 Trichoderma virens 26.13 1.00e-36 148.00
IUUC-Tme-126990 Tuber melanosporum 26.88 2.00e-35 144.00
IUUC-Tbe-127691 Tupaia belangeri 79.34 0.00e+00 778.00
IUUC-Ttr-128600 Tursiops truncatus 87.58 0.00e+00 1233.00
IUUC-Vda-129673 Verticillium dahliae 25.71 1.00e-30 128.00
Created Date 25-Jun-2017

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