iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022456

Ensembl Protein ID

ENSCPOP00000009750.2

UniProt Accession

H0VHV4; H0VHV4_CAVPO

Genbank Protein ID

ENSCPOP00000009750

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02023481

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000010854.3	ENSCPOT00000010954.2	ENSCPOP00000009750.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-19	68.4	124	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v+c+++ +d + l s+sdD+ i  W++rt+++
   Q: 124  GHDNRVNCIQWhQDsDCLYSCSDDKHIVEWNTRTCKV 160
           8***********77799**********9999998876 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MAAGGGGSCD PLSPAGVPCA FSPESQTYFA LASADGHLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPP RLQAKESHQR KKRKSEAIGT SDQIDLLALG TAVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCTG GTGGCGGCGG TAGCTGCGAC CCCCTGTCCC CGGCGGGGGT CCCTTGCGCC 60
TTCTCTCCAG AGAGCCAGAC CTATTTCGCT TTAGCCTCTG CCGACGGCCA TTTGCGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	89.19	0.00e+00	1051.00
IUUC-Atr-002533	Amborella trichopoda	21.92	2.00e-19	90.50
IUUC-Apl-003242	Anas platyrhynchos	71.70	0.00e+00	764.00
IUUC-Aca-004607	Anolis carolinensis	68.74	0.00e+00	823.00
IUUC-Aly-006074	Arabidopsis lyrata	24.03	2.00e-15	77.00
IUUC-Ath-007222	Arabidopsis thaliana	24.03	6.00e-15	75.90
IUUC-Ame-011014	Astyanax mexicanus	52.56	4.00e-160	558.00
IUUC-Bta-012605	Bos taurus	88.85	0.00e+00	1058.00
IUUC-Bdi-014072	Brachypodium distachyon	21.05	4.00e-17	83.20
IUUC-Bol-016255	Brassica oleracea	25.93	5.00e-22	99.40
IUUC-Bra-017484	Brassica rapa	27.94	8.00e-23	102.00
IUUC-Cja-019620	Callithrix jacchus	89.37	0.00e+00	1062.00
IUUC-Cfa-020520	Canis familiaris	88.69	0.00e+00	1059.00
IUUC-Cho-024726	Choloepus hoffmanni	87.16	0.00e+00	1003.00
IUUC-Cin-025761	Ciona intestinalis	35.99	2.00e-92	332.00
IUUC-Dre-028051	Danio rerio	53.12	4.00e-172	598.00
IUUC-Dno-030031	Dasypus novemcinctus	87.35	0.00e+00	1043.00
IUUC-Dme-031653	Drosophila melanogaster	26.52	1.00e-41	164.00
IUUC-Ete-032863	Echinops telfairi	75.24	3.00e-82	299.00
IUUC-Eca-033243	Equus caballus	88.57	0.00e+00	899.00
IUUC-Eeu-034970	Erinaceus europaeus	77.73	0.00e+00	758.00
IUUC-Fca-036009	Felis catus	89.53	0.00e+00	1055.00
IUUC-Fal-037264	Ficedula albicollis	69.98	0.00e+00	738.00
IUUC-Gmo-039124	Gadus morhua	54.31	2.00e-170	592.00
IUUC-Gga-040862	Gallus gallus	69.97	0.00e+00	813.00
IUUC-Gac-041468	Gasterosteus aculeatus	52.00	1.00e-176	613.00
IUUC-Gma-042795	Glycine max	23.14	1.00e-12	68.20
IUUC-Ggo-044432	Gorilla gorilla	84.24	0.00e+00	1093.00
IUUC-Hsa-047036	Homo sapiens	89.70	0.00e+00	1071.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	91.18	0.00e+00	1089.00
IUUC-Lch-049553	Latimeria chalumnae	60.78	0.00e+00	746.00
IUUC-Laf-053462	Loxodonta africana	87.19	0.00e+00	1075.00
IUUC-Mcc-055239	Macaca mulatta	89.70	0.00e+00	1066.00
IUUC-Mtr-057977	Medicago truncatula	21.70	2.00e-18	87.40
IUUC-Mga-060079	Meleagris gallopavo	71.32	0.00e+00	739.00
IUUC-Mmr-061472	Microcebus murinus	88.85	0.00e+00	1063.00
IUUC-Mdo-061972	Monodelphis domestica	74.42	0.00e+00	978.00
IUUC-Mmu-063354	Mus musculus	86.69	0.00e+00	1035.00
IUUC-Mac-065064	Musa acuminata	23.55	7.00e-17	81.60
IUUC-Mpu-066877	Mustela putorius furo	88.02	0.00e+00	1054.00
IUUC-Mlu-067476	Myotis lucifugus	86.19	0.00e+00	1012.00
IUUC-Nle-069119	Nomascus leucogenys	89.70	0.00e+00	1069.00
IUUC-Ont-072093	Oreochromis niloticus	54.29	0.00e+00	653.00
IUUC-Oan-072944	Ornithorhynchus anatinus	71.53	0.00e+00	820.00
IUUC-Ocu-074472	Oryctolagus cuniculus	89.35	0.00e+00	1033.00
IUUC-Oba-075009	Oryza barthii	21.10	2.00e-14	73.90
IUUC-Ogl-077189	Oryza glaberrima	19.73	6.00e-14	72.40
IUUC-Oin-079064	Oryza indica	21.10	4.00e-14	73.20
IUUC-Opu-083604	Oryza punctata	20.33	2.00e-13	70.50
IUUC-Oru-084620	Oryza rufipogon	21.10	5.00e-14	72.80
IUUC-Osa-085345	Oryza sativa	21.10	2.00e-14	73.90
IUUC-Ola-086626	Oryzias latipes	53.08	0.00e+00	642.00
IUUC-Oga-087911	Otolemur garnettii	88.89	0.00e+00	1060.00
IUUC-Ptr-091603	Pan troglodytes	89.53	0.00e+00	1068.00
IUUC-Pan-092569	Papio anubis	89.70	0.00e+00	1066.00
IUUC-Pma-094287	Petromyzon marinus	51.72	7.00e-177	613.00
IUUC-Ppa-095327	Physcomitrella patens	24.53	2.00e-32	134.00
IUUC-Pfo-097292	Poecilia formosa	53.48	4.00e-175	608.00
IUUC-Pab-097878	Pongo abelii	89.71	0.00e+00	1051.00
IUUC-Pop-099418	Populus trichocarpa	20.95	1.00e-14	74.70
IUUC-Pca-100941	Procavia capensis	81.15	0.00e+00	943.00
IUUC-Ppe-101779	Prunus persica	24.91	8.00e-18	85.50
IUUC-Pva-102493	Pteropus vampyrus	81.14	0.00e+00	964.00
IUUC-Rno-105084	Rattus norvegicus	86.69	0.00e+00	1020.00
IUUC-Sha-107486	Sarcophilus harrisii	77.50	0.00e+00	952.00
IUUC-Smo-108825	Selaginella moellendorffii	23.06	2.00e-19	90.90
IUUC-Sit-110825	Setaria italica	21.25	6.00e-17	82.80
IUUC-Sly-111365	Solanum lycopersicum	22.04	8.00e-15	75.50
IUUC-Stu-112812	Solanum tuberosum	22.51	1.00e-13	71.20
IUUC-Sar-113326	Sorex araneus	89.58	2.00e-133	469.00
IUUC-Sbi-114426	Sorghum bicolor	21.27	1.00e-20	94.40
IUUC-Tgu-116726	Taeniopygia guttata	67.63	0.00e+00	802.00
IUUC-Tru-117848	Takifugu rubripes	53.14	4.00e-176	611.00
IUUC-Tsy-119091	Tarsius syrichta	62.23	5.00e-126	444.00
IUUC-Tni-120591	Tetraodon nigroviridis	53.65	4.00e-177	614.00
IUUC-Tca-121576	Theobroma cacao	25.00	2.00e-16	80.90
IUUC-Tae-125648	Triticum aestivum	20.29	1.00e-14	75.10
IUUC-Tbe-127832	Tupaia belangeri	88.97	0.00e+00	917.00
IUUC-Ttr-128812	Tursiops truncatus	88.40	0.00e+00	910.00
IUUC-Xma-133557	Xiphophorus maculatus	53.65	1.00e-176	612.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence