iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cne-026859

Ensembl Protein ID

AAW42904

UniProt Accession

Q5KII4; Q55TV3; Q5KII4_CRYNJ

Genbank Protein ID

AAW42904.2

Protein Name

WD-repeat protein, putative

Genbank Nucleotide ID

AE017344

Gene Name

CND02860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CND02860	AAW42904	AAW42904

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-19	67.0	256	284
UBD/Beta-Prp	3.50e-45	152.8	173	452

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvW 28
           H  s+++l++ s+ +llvs+s D+++k W
   Q: 256  HDQSISGLQWvSGqPLLVSSSLDNSVKQW 284
           999********888*************99 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls.tgkcvhtlk.ghedsvlslsfspsgdklv 110
           it +  +p  +++  g+ dg+i++ d++ g+l+ +++  +++v++++f  dg+ il+t+s+ + i +wdls  g ++htl+ +h++s+  l++   +  lv
   Q: 173  ITTIVQTPAVDVVGIGYLDGSIRIQDIKHGDLVMQMKIEDGAVSSMSFRMDGPsILATASSTGSISIWDLSkGGRILHTLRgAHDQSISGLQWVSGQPLLV 273
           444444588899999*************************************99****************96789******77************99**** PP
   S: 111  sGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl..........ktgkllrtl..........tgghtdsvysls 187
           s s d+ ++ w  ++ + +     +  gh++  +cv++ +++ + + ++++Dr++r   +          ++g+l+++           +  +  ++ s s
   Q: 274  SSSLDNSVKQWLCDSPTGMPRllkLRGGHHAPPTCVRYYGEDgKQILTAGKDRALRYT-SvvrdsrsfelSQGSLVKKAiglgvtvdhlKFPQITAISSSS 373
           ***********9999998888777999**************99*************55.559999***996666666664433333221444444444444 PP
   S: 188  fdsng.....kelvsgsldgtvklwdlqtgec.vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           +   +       l + s+d   + w +q++++   t++  +   +sv ++  +++ + gss g ir+W+++sg+  k+++l+
   Q: 374  M---RskdweDVLTAHSEDAVARTWRVQEKRMgPWTFELEDGYAQSVCVTACGNFGIAGSSTGEIRMWNMQSGKERKSFALT 452
           3...244574566667999*********998864466666666666666666**************************9986 PP

Organism

Cryptococcus neoformans

Protein Sequence
(Fasta)

MFVHTPSGAL ATPTVNITTS VGRSWLMWDA ARMTLVFAGA DTGNQINGLA MTGTDIYVSS 60
GSKVIKYHRG KEVASFLSPD GSTLGQILIF GDDFLVLKKD GSGMFVFDLA TRHLRNQIAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAAAGCG ACAAAAGAAG CAGCTTCGCT CCTCCCAGCC TGCTGCTGGG CCATCGCAGC 60
AACCCTCCTC CCCCCCCCGC ATCTTCGCAC CTTTCAGAGC TCTGGGCTAT GTCACCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

cne:CND02860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	34.94	1.00e-145	508.00
IUUC-Aml-002289	Ailuropoda melanoleuca	34.59	4.00e-139	487.00
IUUC-Atr-002859	Amborella trichopoda	33.02	9.00e-119	419.00
IUUC-Apl-003505	Anas platyrhynchos	35.71	4.00e-137	480.00
IUUC-Aca-004339	Anolis carolinensis	33.74	1.00e-141	495.00
IUUC-Aly-005913	Arabidopsis lyrata	33.84	5.00e-134	469.00
IUUC-Ath-006767	Arabidopsis thaliana	34.03	9.00e-138	482.00
IUUC-Ago-007763	Ashbya gossypii	34.15	3.00e-126	444.00
IUUC-Acl-008275	Aspergillus clavatus	37.94	1.00e-120	425.00
IUUC-Afl-008457	Aspergillus flavus	38.80	2.00e-122	431.00
IUUC-Afu-008914	Aspergillus fumigatus	33.09	4.00e-109	387.00
IUUC-Ani-009225	Aspergillus nidulans	33.85	6.00e-118	416.00
IUUC-Aor-010046	Aspergillus oryzae	35.48	1.00e-143	501.00
IUUC-Ate-010337	Aspergillus terreus	36.23	1.00e-137	482.00
IUUC-Ame-010963	Astyanax mexicanus	35.36	6.00e-134	469.00
IUUC-Bgr-011973	Blumeria graminis	35.65	1.00e-147	515.00
IUUC-Bta-012462	Bos taurus	34.48	2.00e-136	478.00
IUUC-Bci-013940	Botrytis cinerea	34.44	8.00e-153	532.00
IUUC-Bdi-014725	Brachypodium distachyon	33.62	2.00e-129	454.00
IUUC-Bol-016534	Brassica oleracea	33.44	2.00e-131	461.00
IUUC-Bra-016781	Brassica rapa	32.68	6.00e-127	446.00
IUUC-Cel-018581	Caenorhabditis elegans	28.09	5.00e-79	287.00
IUUC-Cja-019675	Callithrix jacchus	35.08	2.00e-151	528.00
IUUC-Cfa-020118	Canis familiaris	34.37	3.00e-137	480.00
IUUC-Cpo-021798	Cavia porcellus	35.03	1.00e-139	488.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	28.41	9.00e-27	112.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.08	6.00e-143	499.00
IUUC-Cho-024518	Choloepus hoffmanni	34.48	2.00e-76	278.00
IUUC-Cin-025339	Ciona intestinalis	31.88	2.00e-138	484.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	34.04	9.00e-140	489.00
IUUC-Cme-027173	Cyanidioschyzon merolae	25.93	7.00e-74	270.00
IUUC-Dre-027733	Danio rerio	33.48	8.00e-131	459.00
IUUC-Dno-029439	Dasypus novemcinctus	35.38	3.00e-136	477.00
IUUC-Dor-030329	Dipodomys ordii	35.07	7.00e-74	270.00
IUUC-Dse-031511	Dothistroma septosporum	34.71	6.00e-123	433.00
IUUC-Dme-031694	Drosophila melanogaster	30.99	1.00e-125	442.00
IUUC-Ete-032930	Echinops telfairi	33.33	6.00e-114	403.00
IUUC-Eca-033302	Equus caballus	35.52	4.00e-141	493.00
IUUC-Eeu-034516	Erinaceus europaeus	34.63	3.00e-147	514.00
IUUC-Fca-036064	Felis catus	35.31	8.00e-138	482.00
IUUC-Fal-037024	Ficedula albicollis	34.63	5.00e-141	493.00
IUUC-Fox-037787	Fusarium oxysporum	34.64	6.00e-133	466.00
IUUC-Fso-038378	Fusarium solani	34.70	8.00e-134	469.00
IUUC-Gmo-039637	Gadus morhua	32.48	5.00e-75	273.00
IUUC-Ggr-040108	Gaeumannomyces graminis	34.55	8.00e-143	499.00
IUUC-Gga-040982	Gallus gallus	34.30	6.00e-151	526.00
IUUC-Gac-041565	Gasterosteus aculeatus	35.80	2.00e-127	448.00
IUUC-Gma-043414	Glycine max	33.63	1.00e-135	475.00
IUUC-Ggo-045463	Gorilla gorilla	34.78	4.00e-141	493.00
IUUC-Hsa-045675	Homo sapiens	35.08	5.00e-143	499.00
IUUC-Hvu-047352	Hordeum vulgare	35.64	2.00e-134	471.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	34.19	5.00e-149	520.00
IUUC-Kpa-049164	Komagataella pastoris	34.45	8.00e-131	459.00
IUUC-Lch-050476	Latimeria chalumnae	32.93	1.00e-144	505.00
IUUC-Lpe-051556	Leersia perrieri	29.78	2.00e-89	321.00
IUUC-Loc-052820	Lepisosteus oculatus	34.37	2.00e-145	508.00
IUUC-Lma-052961	Leptosphaeria maculans	36.18	2.00e-127	448.00
IUUC-Laf-054006	Loxodonta africana	34.70	6.00e-133	466.00
IUUC-Mcc-055037	Macaca mulatta	35.08	7.00e-143	499.00
IUUC-Mor-057280	Magnaporthe oryzae	35.66	1.00e-147	515.00
IUUC-Mpo-057408	Magnaporthe poae	35.08	1.00e-137	482.00
IUUC-Mtr-058473	Medicago truncatula	34.05	2.00e-136	478.00
IUUC-Mla-058892	Melampsora laricipopulina	42.67	0.00e+00	640.00
IUUC-Mga-059598	Meleagris gallopavo	30.58	3.00e-104	370.00
IUUC-Mvi-060334	Microbotryum violaceum	46.45	0.00e+00	768.00
IUUC-Mmr-061239	Microcebus murinus	34.41	3.00e-136	477.00
IUUC-Mdo-062471	Monodelphis domestica	34.15	1.00e-131	462.00
IUUC-Mmu-063872	Mus musculus	34.59	5.00e-143	499.00
IUUC-Mac-064631	Musa acuminata	33.37	2.00e-123	434.00
IUUC-Mpu-066039	Mustela putorius furo	34.41	4.00e-149	520.00
IUUC-Mlu-067485	Myotis lucifugus	34.78	5.00e-138	483.00
IUUC-Nfi-068319	Neosartorya fischeri	32.26	3.00e-124	437.00
IUUC-Ncr-068725	Neurospora crassa	35.28	1.00e-139	489.00
IUUC-Nle-069050	Nomascus leucogenys	34.97	1.00e-142	499.00
IUUC-Opr-070437	Ochotona princeps	37.37	4.00e-38	151.00
IUUC-Ont-071574	Oreochromis niloticus	34.11	7.00e-132	462.00
IUUC-Oan-072826	Ornithorhynchus anatinus	34.59	3.00e-144	503.00
IUUC-Ocu-073995	Oryctolagus cuniculus	35.07	4.00e-135	473.00
IUUC-Oba-075407	Oryza barthii	35.14	2.00e-112	398.00
IUUC-Obr-076451	Oryza brachyantha	34.54	4.00e-139	486.00
IUUC-Ogl-077535	Oryza glaberrima	33.84	8.00e-134	469.00
IUUC-Ogu-077995	Oryza glumaepatula	34.57	2.00e-109	388.00
IUUC-Oin-079431	Oryza indica	33.63	1.00e-134	472.00
IUUC-Olo-080495	Oryza longistaminata	35.83	7.00e-112	396.00
IUUC-Oni-082336	Oryza nivara	32.75	2.00e-123	435.00
IUUC-Opu-084028	Oryza punctata	35.99	2.00e-116	411.00
IUUC-Oru-084500	Oryza rufipogon	34.49	8.00e-110	389.00
IUUC-Osa-086242	Oryza sativa	33.92	2.00e-135	474.00
IUUC-Ola-086612	Oryzias latipes	35.77	1.00e-112	398.00
IUUC-Olu-087703	Ostreococcus lucimarinus	29.39	1.00e-95	342.00
IUUC-Oga-088572	Otolemur garnettii	34.44	7.00e-136	476.00
IUUC-Oar-090363	Ovis aries	34.63	1.00e-139	488.00
IUUC-Ptr-090477	Pan troglodytes	34.97	2.00e-140	491.00
IUUC-Pan-092914	Papio anubis	35.19	2.00e-143	501.00
IUUC-Psi-093019	Pelodiscus sinensis	33.85	3.00e-137	481.00
IUUC-Pma-094303	Petromyzon marinus	32.57	6.00e-107	380.00
IUUC-Pno-094938	Phaeosphaeria nodorum	35.16	6.00e-121	426.00
IUUC-Ppa-095720	Physcomitrella patens	31.91	1.00e-126	446.00
IUUC-Pfo-097034	Poecilia formosa	34.43	7.00e-127	446.00
IUUC-Pab-097669	Pongo abelii	35.08	6.00e-143	499.00
IUUC-Pop-098835	Populus trichocarpa	33.59	1.00e-132	465.00
IUUC-Pca-101097	Procavia capensis	38.80	9.00e-48	183.00
IUUC-Ppe-101430	Prunus persica	33.08	2.00e-142	498.00
IUUC-Pva-103152	Pteropus vampyrus	34.63	5.00e-141	493.00
IUUC-Pgr-103517	Puccinia graminis	39.59	0.00e+00	693.00
IUUC-Ptt-103697	Puccinia triticina	40.07	5.00e-172	595.00
IUUC-Pte-104121	Pyrenophora teres	36.48	1.00e-128	452.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	36.15	1.00e-129	455.00
IUUC-Rno-105435	Rattus norvegicus	34.52	1.00e-141	495.00
IUUC-Sce-106202	Saccharomyces cerevisiae	34.18	2.00e-125	441.00
IUUC-Sha-107272	Sarcophilus harrisii	34.99	2.00e-138	484.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	37.47	2.00e-163	567.00
IUUC-Spo-108256	Schizosaccharomyces pombe	39.82	6.00e-172	595.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	34.18	1.00e-149	522.00
IUUC-Smo-109445	Selaginella moellendorffii	34.25	3.00e-139	487.00
IUUC-Sit-110051	Setaria italica	33.30	3.00e-133	467.00
IUUC-Sly-111181	Solanum lycopersicum	33.67	1.00e-133	469.00
IUUC-Stu-112018	Solanum tuberosum	33.55	3.00e-134	471.00
IUUC-Sar-113348	Sorex araneus	35.60	1.00e-106	379.00
IUUC-Sbi-114282	Sorghum bicolor	33.63	2.00e-136	478.00
IUUC-Sre-114946	Sporisorium reilianum	41.27	3.00e-153	534.00
IUUC-Ssc-115287	Sus scrofa	34.89	6.00e-139	486.00
IUUC-Tgu-117138	Taeniopygia guttata	34.15	1.00e-121	429.00
IUUC-Tru-118232	Takifugu rubripes	34.82	2.00e-131	461.00
IUUC-Tsy-119502	Tarsius syrichta	28.75	2.00e-49	189.00
IUUC-Tni-120378	Tetraodon nigroviridis	35.16	7.00e-134	469.00
IUUC-Tca-121506	Theobroma cacao	32.99	2.00e-128	451.00
IUUC-Tre-122166	Trichoderma reesei	35.48	9.00e-150	522.00
IUUC-Tvi-122385	Trichoderma virens	35.86	2.00e-150	524.00
IUUC-Tae-122836	Triticum aestivum	33.88	3.00e-145	507.00
IUUC-Tur-126490	Triticum urartu	34.81	9.00e-114	402.00
IUUC-Tme-127157	Tuber melanosporum	35.17	2.00e-132	465.00
IUUC-Tbe-127981	Tupaia belangeri	38.12	9.00e-133	465.00
IUUC-Ttr-128886	Tursiops truncatus	34.59	4.00e-139	487.00
IUUC-Uma-129439	Ustilago maydis	41.61	2.00e-166	578.00
IUUC-Vda-129760	Verticillium dahliae	34.33	9.00e-142	496.00
IUUC-Vpa-130456	Vicugna pacos	34.63	2.00e-138	484.00
IUUC-Vvi-131086	Vitis vinifera	33.18	2.00e-138	484.00
IUUC-Xtr-131829	Xenopus tropicalis	34.14	1.00e-142	498.00
IUUC-Xma-133588	Xiphophorus maculatus	34.55	3.00e-123	434.00
IUUC-Yli-134328	Yarrowia lipolytica	30.60	5.00e-112	397.00
IUUC-Zma-135808	Zea mays	34.12	1.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence