iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075789

Ensembl Protein ID

OBART07G25170.1

UniProt Accession

A0A0D3GUJ6; A0A0D3GUJ6_9ORYZ

Protein Name

E3 ubiquitin-protein ligase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART07G25170	OBART07G25170.1	OBART07G25170.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.27	7.00e-40	160.00	IUUC-Dme-031700

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza barthii

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MASVTYLDDA HSEVIDPPKS EEMLDVTELV DDHTQHSPKP NAMVSGNVRE LLECPVCLNA 60
MYPPIHQCSN GHTLCSGCKP RVHNRCPTCR HELGNIRCLA LEKVAASLEL PCKYQNFGCL 120

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Nucleotide Sequence
(Fasta)

TTTCGAATGC TCCTGACTCC TCCTCGGTTC CTCTTCCTCT CGAGCCCTTC ACCGCAGTAG 60
CATCATTCAA GCTGGACCCA AAGCATCCCA GATCAAATCA AACCCGCTGG TTTGGCCTTC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003118	Amborella trichopoda	83.79	5.00e-150	522.00
IUUC-Cel-018320	Caenorhabditis elegans	33.85	4.00e-37	148.00
IUUC-Cin-025674	Ciona intestinalis	35.66	9.00e-43	166.00
IUUC-Csv-026233	Ciona savignyi	36.08	9.00e-43	166.00
IUUC-Dme-031700	Drosophila melanogaster	35.32	9.00e-37	146.00
IUUC-Gma-042926	Glycine max	85.43	8.00e-159	551.00
IUUC-Mtr-058422	Medicago truncatula	83.44	9.00e-156	541.00
IUUC-Opr-070341	Ochotona princeps	24.84	1.00e-12	66.60
IUUC-Oan-073701	Ornithorhynchus anatinus	22.64	5.00e-12	64.30
IUUC-Obr-076037	Oryza brachyantha	97.68	0.00e+00	626.00
IUUC-Ogl-077148	Oryza glaberrima	100.00	0.00e+00	638.00
IUUC-Ogu-078042	Oryza glumaepatula	100.00	0.00e+00	639.00
IUUC-Oin-079325	Oryza indica	99.67	0.00e+00	637.00
IUUC-Olo-080244	Oryza longistaminata	100.00	0.00e+00	643.00
IUUC-Oni-082163	Oryza nivara	100.00	0.00e+00	638.00
IUUC-Oru-084833	Oryza rufipogon	99.67	0.00e+00	637.00
IUUC-Osa-085316	Oryza sativa	99.67	0.00e+00	637.00
IUUC-Ppa-095212	Physcomitrella patens	83.33	3.00e-137	480.00
IUUC-Pva-103132	Pteropus vampyrus	23.90	2.00e-11	62.00
IUUC-Smo-109412	Selaginella moellendorffii	80.15	5.00e-134	469.00
IUUC-Sit-110245	Setaria italica	95.03	2.00e-176	610.00
IUUC-Stu-112474	Solanum tuberosum	83.28	7.00e-155	538.00
IUUC-Sbi-114035	Sorghum bicolor	94.70	8.00e-176	608.00
IUUC-Tsy-119548	Tarsius syrichta	27.35	3.00e-08	51.20
IUUC-Tca-121228	Theobroma cacao	87.67	6.00e-161	558.00
IUUC-Tur-126049	Triticum urartu	90.07	8.00e-167	578.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence