iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091347

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AL954247

Gene Name

AIRE

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000013974.5	ENSPTRT00000026070.4	ENSPTRP00000024049.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-18	65.6	297	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C+vC++gge    l++C+ C ++fH aCl+++  +e p+ + w C++C +
   Q: 297  DECAVCRDGGE----LICCDGCPRAFHLACLSPP-LREIPSGT-WRCSSCLQ 342
           57*********....*******************.*******6.******76 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAADAALRRL LRLHRTEIAM AVDSAFPLLH ALADHDVVPE DKFQETLHLK EKEGCPQAFH 60
ALLSWLLTQG STAILDFWRV LFKDYNLERY GRLQPILDSF PKDVDLSQPR KGRKPPAVPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACGGGCGG GCGCACAGCC GGCGCGGAGG CCCCACAGCC CCGCCAGGAC CCGAGGCCAA 60
GCGAGGGGCT GCCAGTGTCC CGGGACCCAC CGCGTCCGCC CCAGCCCCGG GTCCCCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008087--AIRE
IPR004865--HSR_dom
IPR000770--SAND_dom
IPR010919--SAND_dom-like
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51414--HSR
PS50864--SAND
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF03172--HSR
PF00628--PHD
PF01342--SAND

PRINTS

PR01711--AIREGULATOR

SMART

SM00249--PHD
SM00258--SAND

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016604--C:nuclear body
GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0042393--F:histone binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003712--F:transcription cofactor activity
GO:0045182--F:translation regulator activity
GO:0008270--F:zinc ion binding
GO:0002509--P:central tolerance induction to self antigen
GO:0032602--P:chemokine production
GO:0006959--P:humoral immune response
GO:0006955--P:immune response
GO:0045060--P:negative thymic T cell selection
GO:0002458--P:peripheral T cell tolerance induction
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:2000410--P:regulation of thymocyte migration
GO:0097536--P:thymus epithelium morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001612	Ailuropoda melanoleuca	76.31	3.00e-172	598.00
IUUC-Aca-004543	Anolis carolinensis	69.35	3.00e-24	102.00
IUUC-Bta-012988	Bos taurus	74.95	0.00e+00	638.00
IUUC-Bci-013636	Botrytis cinerea	26.82	2.00e-11	65.50
IUUC-Bdi-014663	Brachypodium distachyon	50.00	4.00e-14	74.30
IUUC-Cja-019486	Callithrix jacchus	84.89	3.00e-119	421.00
IUUC-Cfa-021069	Canis familiaris	74.77	3.00e-174	604.00
IUUC-Cpo-021649	Cavia porcellus	69.96	9.00e-156	543.00
IUUC-Csa-023960	Chlorocebus sabaeus	92.31	0.00e+00	746.00
IUUC-Cne-026966	Cryptococcus neoformans	46.67	3.00e-11	63.20
IUUC-Dre-028583	Danio rerio	40.29	5.00e-56	211.00
IUUC-Dno-029869	Dasypus novemcinctus	64.90	1.00e-131	463.00
IUUC-Dor-030263	Dipodomys ordii	84.04	3.00e-44	172.00
IUUC-Ete-032778	Echinops telfairi	90.82	8.00e-49	188.00
IUUC-Eca-034328	Equus caballus	74.95	3.00e-168	584.00
IUUC-Fca-035400	Felis catus	71.16	4.00e-163	567.00
IUUC-Fal-036644	Ficedula albicollis	52.60	5.00e-69	254.00
IUUC-Fox-038014	Fusarium oxysporum	37.88	2.00e-08	55.10
IUUC-Fso-038262	Fusarium solani	41.67	1.00e-08	55.50
IUUC-Ggo-045250	Gorilla gorilla	98.11	0.00e+00	827.00
IUUC-Hsa-046603	Homo sapiens	98.30	0.00e+00	816.00
IUUC-Hvu-047073	Hordeum vulgare	58.70	2.00e-13	72.00
IUUC-Itr-048977	Ictidomys tridecemlineatus	73.01	3.00e-173	601.00
IUUC-Lch-050310	Latimeria chalumnae	40.83	7.00e-94	337.00
IUUC-Loc-052508	Lepisosteus oculatus	37.13	2.00e-86	312.00
IUUC-Laf-054028	Loxodonta africana	67.64	2.00e-154	539.00
IUUC-Mcc-054935	Macaca mulatta	91.83	0.00e+00	789.00
IUUC-Mga-059318	Meleagris gallopavo	43.25	2.00e-55	209.00
IUUC-Mmr-061557	Microcebus murinus	65.06	2.00e-142	498.00
IUUC-Mdo-062475	Monodelphis domestica	51.61	4.00e-122	431.00
IUUC-Mmu-063994	Mus musculus	70.04	0.00e+00	668.00
IUUC-Mpu-066347	Mustela putorius furo	76.01	0.00e+00	666.00
IUUC-Mlu-068239	Myotis lucifugus	63.98	4.00e-90	324.00
IUUC-Nle-069544	Nomascus leucogenys	93.10	3.00e-28	118.00
IUUC-Opr-071199	Ochotona princeps	76.23	5.00e-73	268.00
IUUC-Ont-072571	Oreochromis niloticus	32.49	3.00e-36	146.00
IUUC-Oan-073739	Ornithorhynchus anatinus	54.63	3.00e-143	501.00
IUUC-Ogl-077865	Oryza glaberrima	56.52	1.00e-12	68.90
IUUC-Olo-080499	Oryza longistaminata	56.52	1.00e-12	69.30
IUUC-Opu-083209	Oryza punctata	56.52	2.00e-12	68.90
IUUC-Ola-086528	Oryzias latipes	36.39	2.00e-43	170.00
IUUC-Oga-088353	Otolemur garnettii	78.91	0.00e+00	684.00
IUUC-Oar-090065	Ovis aries	77.40	9.00e-147	513.00
IUUC-Pan-092423	Papio anubis	92.49	0.00e+00	785.00
IUUC-Psi-093798	Pelodiscus sinensis	54.17	7.00e-136	477.00
IUUC-Pfo-096145	Poecilia formosa	71.70	2.00e-20	93.60
IUUC-Pab-098369	Pongo abelii	92.40	5.00e-137	480.00
IUUC-Pop-099262	Populus trichocarpa	54.55	3.00e-13	71.20
IUUC-Pca-100537	Procavia capensis	73.12	6.00e-178	617.00
IUUC-Ppe-101215	Prunus persica	60.42	3.00e-14	73.90
IUUC-Pva-102639	Pteropus vampyrus	76.40	5.00e-176	610.00
IUUC-Rno-105285	Rattus norvegicus	70.17	0.00e+00	654.00
IUUC-Sha-107159	Sarcophilus harrisii	51.13	5.00e-127	447.00
IUUC-Sit-110355	Setaria italica	48.57	4.00e-13	70.90
IUUC-Sly-111378	Solanum lycopersicum	49.09	6.00e-13	70.10
IUUC-Stu-112427	Solanum tuberosum	49.09	7.00e-13	69.70
IUUC-Sbi-113930	Sorghum bicolor	45.57	5.00e-14	73.90
IUUC-Ssc-115773	Sus scrofa	72.84	5.00e-180	624.00
IUUC-Tgu-116922	Taeniopygia guttata	50.30	8.00e-67	246.00
IUUC-Tru-118263	Takifugu rubripes	31.08	1.00e-60	226.00
IUUC-Tsy-119270	Tarsius syrichta	73.14	3.00e-92	332.00
IUUC-Tni-120138	Tetraodon nigroviridis	30.33	8.00e-56	211.00
IUUC-Tca-121757	Theobroma cacao	57.14	1.00e-13	73.20
IUUC-Tre-121959	Trichoderma reesei	38.30	3.00e-08	54.30
IUUC-Tvi-122553	Trichoderma virens	38.30	3.00e-08	54.70
IUUC-Tae-124715	Triticum aestivum	54.72	2.00e-13	72.00
IUUC-Tur-126422	Triticum urartu	53.19	1.00e-11	66.20
IUUC-Tme-127204	Tuber melanosporum	55.32	9.00e-14	72.80
IUUC-Tbe-128077	Tupaia belangeri	71.21	0.00e+00	642.00
IUUC-Ttr-128781	Tursiops truncatus	81.52	4.00e-75	275.00
IUUC-Vvi-130865	Vitis vinifera	57.45	3.00e-12	68.20
IUUC-Xma-133054	Xiphophorus maculatus	30.31	2.00e-55	210.00
IUUC-Yli-134436	Yarrowia lipolytica	27.52	1.00e-11	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence