iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036850

Ensembl Protein ID

ENSFALP00000004444.1

UniProt Accession

U3JNU0; U3JNU0_FICAL

Genbank Protein ID

ENSFALP00000004444

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01020844

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000004265.1	ENSFALT00000004467.1	ENSFALP00000004444.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	43.27	1.00e-134	479.00	IUUC-Hsa-047035

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MNCWKCPLCP VTSLGFGEWT FLRAKKNGDT EATKKVQSKP KSTTTRSKLR RGKAAAKSQT 60
HHHLPVVKET NLPQDLSPKK QTLLHKEDGD AAACSGETAQ GDGARSPLPA SQLSTETTEC 120

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Nucleotide Sequence
(Fasta)

GTTCTTTCAT TCTTCCTGGT CCTGCTTTGT ACCATTTTGC TGATCCATGT TTACTTGAAG 60
GACACAGCTG GCCTATAGAC TTGGCATCTC AGCAAACAGG TTAGTGCTGC TGGTTATTTT 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4
IPR013087--Znf_C2H2_type

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	48.65	3.00e-149	523.00
IUUC-Apl-003261	Anas platyrhynchos	58.16	0.00e+00	1655.00
IUUC-Aca-004455	Anolis carolinensis	63.24	1.00e-18	83.60
IUUC-Ame-010993	Astyanax mexicanus	30.99	1.00e-11	62.80
IUUC-Bta-013472	Bos taurus	39.28	3.00e-126	447.00
IUUC-Cel-018663	Caenorhabditis elegans	36.36	2.00e-03	37.70
IUUC-Cja-019406	Callithrix jacchus	37.69	8.00e-113	402.00
IUUC-Cfa-020129	Canis familiaris	45.70	1.00e-139	491.00
IUUC-Cpo-021944	Cavia porcellus	44.00	3.00e-134	473.00
IUUC-Csa-023941	Chlorocebus sabaeus	45.41	1.00e-32	135.00
IUUC-Cho-024847	Choloepus hoffmanni	48.02	2.00e-69	258.00
IUUC-Cin-025405	Ciona intestinalis	42.31	1.00e-05	43.90
IUUC-Csv-025916	Ciona savignyi	32.79	4.00e-09	54.70
IUUC-Dre-027764	Danio rerio	36.20	3.00e-83	304.00
IUUC-Dno-030083	Dasypus novemcinctus	43.90	2.00e-124	441.00
IUUC-Dor-031129	Dipodomys ordii	42.56	3.00e-107	384.00
IUUC-Dse-031510	Dothistroma septosporum	38.89	8.20e-02	33.10
IUUC-Ete-032536	Echinops telfairi	36.10	7.00e-31	129.00
IUUC-Eca-033407	Equus caballus	46.89	3.00e-100	360.00
IUUC-Eeu-034473	Erinaceus europaeus	43.56	6.00e-17	83.60
IUUC-Fca-035730	Felis catus	47.11	1.00e-142	501.00
IUUC-Gmo-038677	Gadus morhua	42.72	2.00e-31	130.00
IUUC-Gga-041088	Gallus gallus	66.78	0.00e+00	2147.00
IUUC-Gac-041824	Gasterosteus aculeatus	45.05	1.00e-15	75.90
IUUC-Ggo-045642	Gorilla gorilla	47.10	1.00e-114	408.00
IUUC-Hsa-047035	Homo sapiens	45.16	1.00e-126	448.00
IUUC-Itr-049010	Ictidomys tridecemlineatus	46.31	4.00e-130	459.00
IUUC-Kpa-049328	Komagataella pastoris	31.08	7.00e-04	38.90
IUUC-Lch-050364	Latimeria chalumnae	42.32	6.00e-88	319.00
IUUC-Loc-052423	Lepisosteus oculatus	31.30	6.00e-50	193.00
IUUC-Laf-053910	Loxodonta africana	47.55	1.00e-138	488.00
IUUC-Mcc-055883	Macaca mulatta	44.94	9.00e-126	445.00
IUUC-Meu-056224	Macropus eugenii	45.00	2.00e-77	284.00
IUUC-Mga-059880	Meleagris gallopavo	59.00	0.00e+00	1613.00
IUUC-Mvi-060510	Microbotryum violaceum	40.00	8.00e-06	46.20
IUUC-Mmr-061715	Microcebus murinus	45.17	6.00e-150	525.00
IUUC-Mdo-062426	Monodelphis domestica	37.28	2.00e-157	550.00
IUUC-Mmu-063947	Mus musculus	45.63	2.00e-133	470.00
IUUC-Mpu-066184	Mustela putorius furo	48.10	2.00e-145	510.00
IUUC-Mlu-067533	Myotis lucifugus	42.36	2.00e-136	480.00
IUUC-Nle-069204	Nomascus leucogenys	45.16	1.00e-124	441.00
IUUC-Opr-070377	Ochotona princeps	44.74	2.00e-130	460.00
IUUC-Ont-072551	Oreochromis niloticus	34.33	3.00e-71	264.00
IUUC-Oan-073350	Ornithorhynchus anatinus	40.19	1.00e-81	296.00
IUUC-Ocu-074915	Oryctolagus cuniculus	40.70	2.00e-68	254.00
IUUC-Ola-087360	Oryzias latipes	38.02	2.00e-31	129.00
IUUC-Oga-089106	Otolemur garnettii	39.78	2.00e-99	357.00
IUUC-Oar-089289	Ovis aries	41.29	3.00e-122	433.00
IUUC-Ptr-091469	Pan troglodytes	45.43	1.00e-123	438.00
IUUC-Pan-091841	Papio anubis	45.06	3.00e-78	287.00
IUUC-Psi-093842	Pelodiscus sinensis	46.28	0.00e+00	1155.00
IUUC-Pma-094732	Petromyzon marinus	68.75	2.00e-08	52.00
IUUC-Pfo-097299	Poecilia formosa	39.64	3.00e-34	140.00
IUUC-Pab-098271	Pongo abelii	44.82	1.00e-122	435.00
IUUC-Pca-100721	Procavia capensis	47.43	6.00e-131	462.00
IUUC-Pva-102276	Pteropus vampyrus	42.62	8.00e-145	508.00
IUUC-Rno-105619	Rattus norvegicus	43.86	7.00e-139	488.00
IUUC-Sha-106722	Sarcophilus harrisii	38.22	6.00e-152	532.00
IUUC-Sar-113673	Sorex araneus	48.82	2.00e-42	168.00
IUUC-Sre-115039	Sporisorium reilianum	35.09	4.00e-04	38.50
IUUC-Ssc-115383	Sus scrofa	44.31	4.00e-114	406.00
IUUC-Tgu-117243	Taeniopygia guttata	81.71	0.00e+00	647.00
IUUC-Tru-118092	Takifugu rubripes	59.09	3.00e-18	85.10
IUUC-Tsy-119362	Tarsius syrichta	46.61	7.00e-60	226.00
IUUC-Tni-120380	Tetraodon nigroviridis	65.00	5.00e-17	80.90
IUUC-Tbe-127404	Tupaia belangeri	38.69	2.00e-31	131.00
IUUC-Ttr-128317	Tursiops truncatus	44.04	1.00e-138	488.00
IUUC-Uma-129640	Ustilago maydis	43.14	9.00e-06	43.90
IUUC-Xtr-132533	Xenopus tropicalis	41.71	8.00e-107	382.00
IUUC-Xma-134059	Xiphophorus maculatus	39.52	6.00e-36	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence