iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099777

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s11180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s11180	POPTR_0005s11180.1	POPTR_0005s11180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	6.80e-33	113.7	43	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 43   KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 90
           89*********************************************9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

ELIHEALFLL KGLGCENILF LLFLFLVSYG CFGVQAANYL NIKGLLDLTC QTVADMIKGK 60
TPEEIRKTFN IKNDFTPEEE EEVRRENQWA FE 92

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCTAATTC ATGAAGCTCT GTTTTTGCTC AAAGGCCTTG GATGTGAAAA TATTTTGTTC 60
CTTTTGTTTT TGTTTTTGGT TTCTTATGGA TGTTTTGGAG TTCAGGTTAA ATAGTGTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR016072--Skp1_comp_dimer

Pfam

PF01466--Skp1

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s11180g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence