iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000015539.1	ENSLOCT00000019165.1	ENSLOCP00000019133.1
ENSLOCG00000015539.1	ENSLOCT00000019166.1	ENSLOCP00000019134.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-63	208.3	1695	1727
UBD/Beta-Prp	3.10e-133	443.7	725	941

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           +++++la  ++ ++++s+sdDgti++WDl + +
   Q: 1695 GEIWGLAThPSkDMFISASDDGTIRIWDLADKK 1727
           468888889777****************98765 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrslsg.heaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtl 90
           gh+++ ++ ++ +p k+++atg  +rd +i vwd++t k+l+ l+g h+ +v a++fs dgk lv+++ D  + i vwd ++g+ + t 
   Q: 725  GHDDDILS-LALHPVKDYVATGqvGRDPSIHVWDIQTLKCLSLLKGhHQRGVCALDFSADGKSLVSVGIDdnHCIAVWDWKKGEKLATA 812
           45666665.999*********95569******************6615779***************99998999*************** PP
   S: 91   kghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           +gh+d++  ++ +p   dklv+ +  + i+ w++  g    +     + g+ ++ ++v++   ++l++sG++ + v +W  k   ll+t
   Q: 813  RGHKDKLFVVKCNPfHMDKLVTVG-MKHIKFWQHAGGGLTFKrgtfGNLGKLETMMSVCYGRAEDLVFSGAATGDVYIW--KDTLLLKT 898
           **************7779999988.99*****999888776679887889999*********99***************..88999*** PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
            +  h+++v  +   +  k +v+g++dg v+lwd   ++c++t+  
   Q: 899  IKA-HDGPVFAMYSLD--KGFVTGGKDGVVELWDDMFERCLKTYAI 941
           *98.******999888..67**********************9965 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MADRTAPRCQ LRLEWVYGYR GHQCRNNLYY TAGKEVVYFV AGVGVVYNTR EHSQKFYLGH 60
NDDIISLALH PDKIQVATGQ VGKDPYICVW DTYSVQTVSI LKDVHTHGVA CLAFDSDGQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGACAGCG TCTACCCTCA TGGCGTCGTG GTAACCAAGT GCTGCGTTCA CCTAGAAACC 60
AGAGCACCTA TTCTCGAAAA CATTACGCAA AGAAACCAGC TGGAATTACC CTTGAATGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	88.24	0.00e+00	3502.00
IUUC-Apl-003604	Anas platyrhynchos	87.99	0.00e+00	3479.00
IUUC-Aca-004572	Anolis carolinensis	84.89	0.00e+00	3407.00
IUUC-Ame-010713	Astyanax mexicanus	84.59	0.00e+00	3394.00
IUUC-Bta-012812	Bos taurus	88.09	0.00e+00	3498.00
IUUC-Cja-019191	Callithrix jacchus	87.64	0.00e+00	3461.00
IUUC-Cfa-020041	Canis familiaris	88.25	0.00e+00	3252.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	35.42	3.00e-102	368.00
IUUC-Csa-023689	Chlorocebus sabaeus	87.70	0.00e+00	3398.00
IUUC-Cho-025038	Choloepus hoffmanni	86.39	0.00e+00	1323.00
IUUC-Cin-025205	Ciona intestinalis	63.61	0.00e+00	2584.00
IUUC-Csv-026014	Ciona savignyi	63.72	0.00e+00	2583.00
IUUC-Dno-029982	Dasypus novemcinctus	86.45	0.00e+00	3336.00
IUUC-Eca-034161	Equus caballus	86.94	0.00e+00	3346.00
IUUC-Fca-036307	Felis catus	88.29	0.00e+00	3501.00
IUUC-Fal-037332	Ficedula albicollis	86.84	0.00e+00	3421.00
IUUC-Gmo-039057	Gadus morhua	77.83	0.00e+00	3123.00
IUUC-Gac-042555	Gasterosteus aculeatus	84.24	0.00e+00	3392.00
IUUC-Ggo-045107	Gorilla gorilla	88.44	0.00e+00	3507.00
IUUC-Hsa-046482	Homo sapiens	88.44	0.00e+00	3509.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	86.86	0.00e+00	3393.00
IUUC-Laf-053649	Loxodonta africana	86.27	0.00e+00	3417.00
IUUC-Mcc-055361	Macaca mulatta	88.15	0.00e+00	3066.00
IUUC-Meu-056618	Macropus eugenii	73.23	0.00e+00	1663.00
IUUC-Mga-059202	Meleagris gallopavo	86.81	0.00e+00	3365.00
IUUC-Mmr-060729	Microcebus murinus	86.77	0.00e+00	3501.00
IUUC-Mdo-062462	Monodelphis domestica	88.01	0.00e+00	3400.00
IUUC-Mmu-063865	Mus musculus	87.63	0.00e+00	3507.00
IUUC-Mpu-066724	Mustela putorius furo	88.54	0.00e+00	3509.00
IUUC-Mlu-067816	Myotis lucifugus	88.29	0.00e+00	3512.00
IUUC-Opr-070213	Ochotona princeps	84.31	0.00e+00	1800.00
IUUC-Ont-071928	Oreochromis niloticus	82.36	0.00e+00	3350.00
IUUC-Oan-073563	Ornithorhynchus anatinus	88.12	0.00e+00	3479.00
IUUC-Ocu-074531	Oryctolagus cuniculus	88.54	0.00e+00	3510.00
IUUC-Ola-086943	Oryzias latipes	81.33	0.00e+00	3217.00
IUUC-Olu-087860	Ostreococcus lucimarinus	40.13	3.00e-117	415.00
IUUC-Oga-088665	Otolemur garnettii	87.43	0.00e+00	3383.00
IUUC-Oar-090429	Ovis aries	88.24	0.00e+00	3504.00
IUUC-Ptr-091168	Pan troglodytes	82.84	0.00e+00	3237.00
IUUC-Psi-093281	Pelodiscus sinensis	87.13	0.00e+00	3470.00
IUUC-Pma-094424	Petromyzon marinus	72.10	2.00e-124	437.00
IUUC-Pfo-096150	Poecilia formosa	84.26	0.00e+00	3295.00
IUUC-Pab-098561	Pongo abelii	87.20	0.00e+00	3031.00
IUUC-Pca-100107	Procavia capensis	62.52	0.00e+00	1968.00
IUUC-Rno-105002	Rattus norvegicus	87.32	0.00e+00	3508.00
IUUC-Sha-107105	Sarcophilus harrisii	85.62	0.00e+00	3277.00
IUUC-Sar-113401	Sorex araneus	65.49	0.00e+00	1441.00
IUUC-Ssc-116282	Sus scrofa	88.06	0.00e+00	3400.00
IUUC-Tgu-116807	Taeniopygia guttata	87.68	0.00e+00	3467.00
IUUC-Tru-118040	Takifugu rubripes	82.88	0.00e+00	3334.00
IUUC-Tni-120118	Tetraodon nigroviridis	79.79	0.00e+00	3263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence