iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022056

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Coronin

Genbank Nucleotide ID

AAKN02007766

Gene Name

CORO1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000003905.3	ENSCPOT00000003949.2	ENSCPOP00000003524.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-20	70.3	79	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHt++v ++a+   +d+ ++sGs D+t++vW++ +g l
   Q: 79   GHTAPVLDIAWcphNDNVIASGSEDCTVMVWEIPDGGL 116
           8***********9877****************998876 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSRQVVRSSK FRHVFGQPAK ADQCYEDVRV SQTTWDSGFC AVNPKFVALI CEASGGGAFL 60
VLPLSKTGRV DKNVPMVCGH TAPVLDIAWC PHNDNVIASG SEDCTVMVWE IPDGGLVVPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCGGC AGGTGGTGCG TTCCAGCAAG TTCCGCCATG TGTTTGGACA GCCAGCCAAG 60
GCAGATCAGT GCTACGAGGA TGTGCGTGTC TCACAGACCA CCTGGGACAG CGGCTTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015049--Trimer_CC
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF08954--Trimer_CC
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0005884--C:actin filament
GO:0030424--C:axon
GO:0005911--C:cell-cell junction
GO:0030864--C:cortical actin cytoskeleton
GO:0005829--C:cytosol
GO:0005769--C:early endosome
GO:0070062--C:extracellular exosome
GO:0001772--C:immunological synapse
GO:0030027--C:lamellipodium
GO:0001891--C:phagocytic cup
GO:0045335--C:phagocytic vesicle
GO:0043234--C:protein complex
GO:0003723--F:RNA binding
GO:0007015--P:actin filament organization
GO:0006816--P:calcium ion transport
GO:0031589--P:cell-substrate adhesion
GO:0071353--P:cellular response to interleukin-4
GO:0061502--P:early endosome to recycling endosome transport
GO:0048873--P:homeostasis of number of cells within a tissue
GO:0030595--P:leukocyte chemotaxis
GO:0043320--P:natural killer cell degranulation
GO:0051126--P:negative regulation of actin nucleation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0031339--P:negative regulation of vesicle fusion
GO:0038180--P:nerve growth factor signaling pathway
GO:0001845--P:phagolysosome assembly
GO:0050918--P:positive chemotaxis
GO:0030335--P:positive regulation of cell migration
GO:0042102--P:positive regulation of T cell proliferation
GO:0008360--P:regulation of cell shape
GO:0051279--P:regulation of release of sequestered calcium ion into cytosol
GO:0043029--P:T cell homeostasis
GO:0032796--P:uropod organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002012	Ailuropoda melanoleuca	94.58	0.00e+00	910.00
IUUC-Ame-011101	Astyanax mexicanus	69.08	0.00e+00	687.00
IUUC-Bta-013168	Bos taurus	94.36	0.00e+00	908.00
IUUC-Cja-019660	Callithrix jacchus	95.66	0.00e+00	924.00
IUUC-Cfa-020938	Canis familiaris	94.36	0.00e+00	908.00
IUUC-Csa-023193	Chlorocebus sabaeus	95.44	0.00e+00	917.00
IUUC-Cne-026773	Cryptococcus neoformans	39.18	2.00e-86	313.00
IUUC-Dre-028167	Danio rerio	68.64	0.00e+00	676.00
IUUC-Dno-029363	Dasypus novemcinctus	94.79	0.00e+00	908.00
IUUC-Dor-030426	Dipodomys ordii	95.88	0.00e+00	921.00
IUUC-Eca-034229	Equus caballus	93.71	0.00e+00	903.00
IUUC-Eeu-034499	Erinaceus europaeus	93.09	0.00e+00	780.00
IUUC-Fca-036472	Felis catus	93.93	0.00e+00	904.00
IUUC-Ggo-045162	Gorilla gorilla	95.01	0.00e+00	915.00
IUUC-Hsa-046874	Homo sapiens	95.01	0.00e+00	915.00
IUUC-Itr-048911	Ictidomys tridecemlineatus	95.66	0.00e+00	923.00
IUUC-Lch-050582	Latimeria chalumnae	67.16	0.00e+00	693.00
IUUC-Laf-053427	Loxodonta africana	94.36	0.00e+00	902.00
IUUC-Mcc-055750	Macaca mulatta	96.25	0.00e+00	858.00
IUUC-Meu-056083	Macropus eugenii	88.29	0.00e+00	853.00
IUUC-Mmr-060858	Microcebus murinus	94.14	0.00e+00	910.00
IUUC-Mdo-062469	Monodelphis domestica	89.30	0.00e+00	856.00
IUUC-Mmu-063583	Mus musculus	93.93	0.00e+00	909.00
IUUC-Mpu-066451	Mustela putorius furo	95.25	0.00e+00	881.00
IUUC-Mlu-066978	Myotis lucifugus	93.93	0.00e+00	903.00
IUUC-Ncr-068781	Neurospora crassa	41.75	3.00e-98	352.00
IUUC-Nle-069815	Nomascus leucogenys	95.23	0.00e+00	916.00
IUUC-Opr-070911	Ochotona princeps	93.28	0.00e+00	895.00
IUUC-Ont-072391	Oreochromis niloticus	68.18	0.00e+00	683.00
IUUC-Ocu-074429	Oryctolagus cuniculus	84.82	0.00e+00	789.00
IUUC-Oga-089072	Otolemur garnettii	93.52	0.00e+00	897.00
IUUC-Oar-089676	Ovis aries	94.58	0.00e+00	910.00
IUUC-Ptr-091647	Pan troglodytes	95.23	0.00e+00	916.00
IUUC-Pan-092672	Papio anubis	95.44	0.00e+00	917.00
IUUC-Pab-098348	Pongo abelii	90.24	0.00e+00	851.00
IUUC-Pva-102668	Pteropus vampyrus	93.93	0.00e+00	903.00
IUUC-Pgr-103354	Puccinia graminis	41.73	1.00e-91	330.00
IUUC-Rno-105604	Rattus norvegicus	93.49	0.00e+00	904.00
IUUC-Sha-107210	Sarcophilus harrisii	89.15	0.00e+00	873.00
IUUC-Sar-113292	Sorex araneus	95.41	0.00e+00	735.00
IUUC-Sre-114911	Sporisorium reilianum	39.61	1.00e-80	293.00
IUUC-Tre-122159	Trichoderma reesei	40.96	3.00e-94	339.00
IUUC-Tvi-122480	Trichoderma virens	42.33	3.00e-95	342.00
IUUC-Tme-126924	Tuber melanosporum	40.98	5.00e-93	335.00
IUUC-Tbe-128025	Tupaia belangeri	95.17	8.00e-152	528.00
IUUC-Ttr-128689	Tursiops truncatus	94.14	0.00e+00	907.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence