iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000009820.1	ENSONIT00000012349.1	ENSONIP00000012340.1
ENSONIG00000009820.1	ENSONIT00000012350.1	ENSONIP00000012341.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-20	71.3	79	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gHt++v +++f   +d++++sGs D+++++W++ +g 
   Q: 79   GHTGPVLDIEFcphNDNIIASGSEDCSVMIWEIPEGG 115
           8***********9877****************87776 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MSRKVVRTSK FRHVFGQAVK ADQCYDDIRI SQMTWDSNFC SVNPKFVAMI VDASGGGAFM 60
VLPLSKTGRI DMSYPTVCGH TGPVLDIEFC PHNDNIIASG SEDCSVMIWE IPEGGLTSPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCACCATGT CCAGAAAGGT TGTGAGGACC AGCAAGTTCC GTCACGTCTT TGGCCAGGCT 60
GTGAAAGCTG ACCAATGCTA CGATGACATC CGAATCTCCC AGATGACCTG GGACAGCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002012	Ailuropoda melanoleuca	68.83	0.00e+00	686.00
IUUC-Ame-011101	Astyanax mexicanus	88.99	0.00e+00	847.00
IUUC-Bta-013168	Bos taurus	69.70	0.00e+00	692.00
IUUC-Cja-019660	Callithrix jacchus	68.61	0.00e+00	686.00
IUUC-Cfa-020938	Canis familiaris	68.83	0.00e+00	687.00
IUUC-Cpo-022056	Cavia porcellus	68.18	0.00e+00	683.00
IUUC-Csa-023193	Chlorocebus sabaeus	68.61	0.00e+00	683.00
IUUC-Dre-028167	Danio rerio	86.34	0.00e+00	819.00
IUUC-Dno-029363	Dasypus novemcinctus	69.55	0.00e+00	689.00
IUUC-Dor-030426	Dipodomys ordii	69.26	0.00e+00	686.00
IUUC-Eca-034229	Equus caballus	67.97	0.00e+00	680.00
IUUC-Eeu-034499	Erinaceus europaeus	68.23	1.00e-170	592.00
IUUC-Fca-036472	Felis catus	69.26	0.00e+00	691.00
IUUC-Gmo-039519	Gadus morhua	84.77	0.00e+00	828.00
IUUC-Gac-042545	Gasterosteus aculeatus	92.51	0.00e+00	882.00
IUUC-Ggo-045162	Gorilla gorilla	68.40	0.00e+00	682.00
IUUC-Hsa-046874	Homo sapiens	68.40	0.00e+00	682.00
IUUC-Itr-048911	Ictidomys tridecemlineatus	69.26	0.00e+00	690.00
IUUC-Lch-050582	Latimeria chalumnae	69.70	0.00e+00	701.00
IUUC-Laf-053427	Loxodonta africana	68.83	0.00e+00	677.00
IUUC-Meu-056083	Macropus eugenii	68.40	0.00e+00	668.00
IUUC-Mmr-060858	Microcebus murinus	68.83	0.00e+00	688.00
IUUC-Mdo-062469	Monodelphis domestica	69.28	0.00e+00	684.00
IUUC-Mmu-063583	Mus musculus	67.97	0.00e+00	678.00
IUUC-Mpu-066451	Mustela putorius furo	70.59	0.00e+00	671.00
IUUC-Mlu-066978	Myotis lucifugus	69.26	0.00e+00	689.00
IUUC-Nle-069815	Nomascus leucogenys	69.05	0.00e+00	688.00
IUUC-Opr-070911	Ochotona princeps	69.85	0.00e+00	691.00
IUUC-Ola-087129	Oryzias latipes	87.66	0.00e+00	860.00
IUUC-Oga-089072	Otolemur garnettii	68.75	0.00e+00	682.00
IUUC-Oar-089676	Ovis aries	69.48	0.00e+00	692.00
IUUC-Ptr-091647	Pan troglodytes	68.40	0.00e+00	682.00
IUUC-Pan-092672	Papio anubis	68.61	0.00e+00	683.00
IUUC-Pfo-096735	Poecilia formosa	92.95	0.00e+00	880.00
IUUC-Pva-102668	Pteropus vampyrus	69.05	0.00e+00	687.00
IUUC-Rno-105604	Rattus norvegicus	68.40	0.00e+00	681.00
IUUC-Spo-108364	Schizosaccharomyces pombe	42.82	2.00e-95	343.00
IUUC-Sar-113292	Sorex araneus	76.76	2.00e-178	618.00
IUUC-Sre-114911	Sporisorium reilianum	36.54	3.00e-79	289.00
IUUC-Tru-117655	Takifugu rubripes	86.35	0.00e+00	848.00
IUUC-Tni-120773	Tetraodon nigroviridis	88.02	0.00e+00	823.00
IUUC-Ttr-128689	Tursiops truncatus	68.61	0.00e+00	683.00
IUUC-Uma-129489	Ustilago maydis	36.71	4.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence