iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-018913

Ensembl Protein ID

ENSCJAP00000000952.2

UniProt Accession

F6RR29; F6RR29_CALJA

Genbank Protein ID

JAB27641.1; JAB49214.1

Protein Name

Cytoplasmic dynein 1 intermediate chain 1 isoform a

Genbank Nucleotide ID

ACFV01011933; GAMP01003541

Gene Name

DYNC1I1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000000528.2	ENSCJAT00000000963.2	ENSCJAP00000000905.2
ENSCJAG00000000528.2	ENSCJAT00000001008.2	ENSCJAP00000000949.2
ENSCJAG00000000528.2	ENSCJAT00000001011.2	ENSCJAP00000000952.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-13	49.3	340	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           ++sv +++f    + +l+v G++ g+i +WD r+++
   Q: 340  QSSVMSVCFarfhP-NLVVGGTYSGQIVLWDNRSHR 374
           57899999999754.9999999*********98875 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKEADMQ QKKEPVQDDS DLDRKRRETE 60
ALLQSIGISP EPPLVQPLHF LTWDTCYFHY LVPTPMSPSS KSVSTPSEAG SQDSGDLGPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGTGGAG GGCGTGGAGG GCGTGGGAAG GGGGCGGGGC GAGCCCCGCA GACTGGGTGC 60
TCCGGGGAGC TGTCAGTGTC GGGCTCCGGA AGAGAGGAAG TGATAGCTCC CGTAGGAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0036464--C:cytoplasmic ribonucleoprotein granule
GO:0000776--C:kinetochore
GO:0005634--C:nucleus
GO:0055037--C:recycling endosome
GO:0000922--C:spindle pole
GO:0047496--P:vesicle transport along microtubule

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	99.07	0.00e+00	1245.00
IUUC-Aca-004659	Anolis carolinensis	92.87	0.00e+00	1139.00
IUUC-Ame-010879	Astyanax mexicanus	81.33	0.00e+00	1036.00
IUUC-Bgr-011987	Blumeria graminis	39.70	4.00e-100	358.00
IUUC-Bta-013557	Bos taurus	92.56	0.00e+00	1134.00
IUUC-Cfa-020794	Canis familiaris	96.59	0.00e+00	1199.00
IUUC-Cpo-021891	Cavia porcellus	98.65	0.00e+00	981.00
IUUC-Csa-023506	Chlorocebus sabaeus	96.74	0.00e+00	1200.00
IUUC-Cho-025102	Choloepus hoffmanni	85.12	0.00e+00	1022.00
IUUC-Csv-025876	Ciona savignyi	47.34	1.00e-175	610.00
IUUC-Cgl-026617	Colletotrichum gloeosporioides	39.74	9.00e-88	317.00
IUUC-Dre-028093	Danio rerio	77.05	0.00e+00	961.00
IUUC-Dno-029846	Dasypus novemcinctus	98.69	0.00e+00	954.00
IUUC-Dor-030613	Dipodomys ordii	98.76	0.00e+00	1237.00
IUUC-Ete-032322	Echinops telfairi	83.88	0.00e+00	1013.00
IUUC-Eca-033324	Equus caballus	99.38	0.00e+00	1249.00
IUUC-Fca-036050	Felis catus	93.08	0.00e+00	1106.00
IUUC-Fal-037664	Ficedula albicollis	93.80	0.00e+00	1173.00
IUUC-Gmo-038624	Gadus morhua	73.02	0.00e+00	862.00
IUUC-Gga-040886	Gallus gallus	93.49	0.00e+00	1169.00
IUUC-Gac-042215	Gasterosteus aculeatus	75.50	0.00e+00	901.00
IUUC-Ggo-045363	Gorilla gorilla	99.53	0.00e+00	1250.00
IUUC-Hsa-046861	Homo sapiens	99.53	0.00e+00	1250.00
IUUC-Itr-048603	Ictidomys tridecemlineatus	98.70	0.00e+00	954.00
IUUC-Kpa-049295	Komagataella pastoris	25.11	2.00e-29	124.00
IUUC-Loc-052873	Lepisosteus oculatus	87.17	0.00e+00	1086.00
IUUC-Laf-053494	Loxodonta africana	98.45	0.00e+00	1241.00
IUUC-Mcc-055731	Macaca mulatta	99.53	0.00e+00	1250.00
IUUC-Mpo-057521	Magnaporthe poae	38.17	9.00e-82	298.00
IUUC-Mga-059796	Meleagris gallopavo	93.98	0.00e+00	958.00
IUUC-Mmr-060828	Microcebus murinus	99.22	0.00e+00	1247.00
IUUC-Mmu-063862	Mus musculus	98.29	0.00e+00	1239.00
IUUC-Mpu-066835	Mustela putorius furo	96.28	0.00e+00	1197.00
IUUC-Mlu-067993	Myotis lucifugus	97.84	0.00e+00	1232.00
IUUC-Nle-069711	Nomascus leucogenys	99.69	0.00e+00	1253.00
IUUC-Opr-070509	Ochotona princeps	97.37	0.00e+00	1184.00
IUUC-Ont-072346	Oreochromis niloticus	78.43	0.00e+00	956.00
IUUC-Ocu-074398	Oryctolagus cuniculus	95.50	0.00e+00	1186.00
IUUC-Ola-087168	Oryzias latipes	75.50	0.00e+00	933.00
IUUC-Oga-088138	Otolemur garnettii	97.61	0.00e+00	934.00
IUUC-Oar-090454	Ovis aries	95.35	0.00e+00	1184.00
IUUC-Ptr-090850	Pan troglodytes	99.53	0.00e+00	1250.00
IUUC-Pan-092449	Papio anubis	96.74	0.00e+00	1200.00
IUUC-Psi-093490	Pelodiscus sinensis	93.95	0.00e+00	1158.00
IUUC-Pab-098252	Pongo abelii	99.53	0.00e+00	1251.00
IUUC-Pca-100827	Procavia capensis	98.03	0.00e+00	641.00
IUUC-Pva-102223	Pteropus vampyrus	93.64	0.00e+00	1157.00
IUUC-Ptt-103792	Puccinia triticina	40.79	4.00e-109	389.00
IUUC-Rno-105683	Rattus norvegicus	98.14	0.00e+00	1227.00
IUUC-Sja-107798	Schizosaccharomyces japonicus	24.89	8.00e-30	125.00
IUUC-Ssc-115238	Sus scrofa	99.07	0.00e+00	1099.00
IUUC-Tgu-117310	Taeniopygia guttata	90.44	0.00e+00	977.00
IUUC-Tsy-119423	Tarsius syrichta	84.34	0.00e+00	973.00
IUUC-Ttr-129188	Tursiops truncatus	99.38	0.00e+00	1249.00
IUUC-Xtr-132370	Xenopus tropicalis	88.49	0.00e+00	964.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence