iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000029757.16	ENSMUST00000115556.7	ENSMUSP00000111218.1
ENSMUSG00000029757.16	ENSMUST00000115555.7	ENSMUSP00000111217.1
ENSMUSG00000029757.16	ENSMUST00000115559.9	ENSMUSP00000111221.3
ENSMUSG00000029757.16	ENSMUST00000115554.3	ENSMUSP00000111216.1
ENSMUSG00000029757.16	ENSMUST00000153942.1	ENSMUSP00000121787.1
ENSMUSG00000029757.16	ENSMUST00000204149.1	ENSMUSP00000145221.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RepTar	RAID2
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
CPLM	PHOSIDA	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-13	51.6	340	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           ++sv +++f    + +l+v G++ g+i +WD r+++
   Q: 340  QSSVMSVCFarfhP-NLVVGGTYSGQIVLWDNRSHR 374
           57899999999754.9999999*********98875 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKEADMQ QKKEPVQDDS DLDRKRRETE 60
ALLQSIGISP EPPLVQPLHF LTWDTCYFHY LVPTPMSPSS KSVSTPSDAG SQDSGDLGPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCCCGGGT TCCCTCCTCC TTGCCAGGCT GGCCCGAGGC GGTGCTGCGC TGTGCGGAGG 60
CCCTCCCGCG GGAGGCGCGG GTGTGGAGGG CGTGGGCCGT GGGCGGGGCG AGCCCCGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0007018--P:microtubule-based movement

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	97.98	0.00e+00	1236.00
IUUC-Aca-004659	Anolis carolinensis	91.94	0.00e+00	1130.00
IUUC-Ame-010879	Astyanax mexicanus	81.33	0.00e+00	1035.00
IUUC-Bgr-011987	Blumeria graminis	39.91	1.00e-100	360.00
IUUC-Bta-013557	Bos taurus	91.94	0.00e+00	1129.00
IUUC-Cja-018913	Callithrix jacchus	98.29	0.00e+00	1239.00
IUUC-Cfa-020794	Canis familiaris	95.50	0.00e+00	1189.00
IUUC-Cpo-021891	Cavia porcellus	98.08	0.00e+00	976.00
IUUC-Csa-023506	Chlorocebus sabaeus	95.35	0.00e+00	1186.00
IUUC-Cho-025102	Choloepus hoffmanni	84.34	0.00e+00	1014.00
IUUC-Csv-025876	Ciona savignyi	47.62	1.00e-175	610.00
IUUC-Cgl-026617	Colletotrichum gloeosporioides	39.74	9.00e-88	318.00
IUUC-Dre-028093	Danio rerio	76.90	0.00e+00	959.00
IUUC-Dno-029846	Dasypus novemcinctus	97.17	0.00e+00	944.00
IUUC-Dor-030613	Dipodomys ordii	97.67	0.00e+00	1229.00
IUUC-Ete-032322	Echinops telfairi	83.41	0.00e+00	1009.00
IUUC-Eca-033324	Equus caballus	98.14	0.00e+00	1238.00
IUUC-Fca-036050	Felis catus	91.93	0.00e+00	1098.00
IUUC-Fal-037664	Ficedula albicollis	93.33	0.00e+00	1168.00
IUUC-Gmo-038624	Gadus morhua	72.71	0.00e+00	859.00
IUUC-Gga-040886	Gallus gallus	93.64	0.00e+00	1169.00
IUUC-Gac-042215	Gasterosteus aculeatus	75.66	0.00e+00	901.00
IUUC-Ggo-045363	Gorilla gorilla	98.14	0.00e+00	1237.00
IUUC-Hsa-046861	Homo sapiens	98.14	0.00e+00	1237.00
IUUC-Itr-048603	Ictidomys tridecemlineatus	98.26	0.00e+00	953.00
IUUC-Kpa-049295	Komagataella pastoris	25.35	3.00e-29	123.00
IUUC-Loc-052873	Lepisosteus oculatus	87.17	0.00e+00	1085.00
IUUC-Laf-053494	Loxodonta africana	97.83	0.00e+00	1236.00
IUUC-Mcc-055731	Macaca mulatta	98.14	0.00e+00	1237.00
IUUC-Mor-056924	Magnaporthe oryzae	42.47	2.00e-100	360.00
IUUC-Mpo-057521	Magnaporthe poae	38.05	6.00e-82	298.00
IUUC-Mga-059796	Meleagris gallopavo	94.17	0.00e+00	959.00
IUUC-Mmr-060828	Microcebus murinus	98.14	0.00e+00	1238.00
IUUC-Mpu-066835	Mustela putorius furo	95.50	0.00e+00	1191.00
IUUC-Mlu-067993	Myotis lucifugus	97.38	0.00e+00	1228.00
IUUC-Nle-069711	Nomascus leucogenys	98.29	0.00e+00	1240.00
IUUC-Opr-070509	Ochotona princeps	97.04	0.00e+00	1178.00
IUUC-Ont-072346	Oreochromis niloticus	78.27	0.00e+00	955.00
IUUC-Ocu-074398	Oryctolagus cuniculus	95.04	0.00e+00	1183.00
IUUC-Ola-087168	Oryzias latipes	75.50	0.00e+00	931.00
IUUC-Oga-088138	Otolemur garnettii	96.96	0.00e+00	932.00
IUUC-Oar-090454	Ovis aries	94.42	0.00e+00	1175.00
IUUC-Ptr-090850	Pan troglodytes	98.14	0.00e+00	1237.00
IUUC-Pan-092449	Papio anubis	95.35	0.00e+00	1186.00
IUUC-Psi-093490	Pelodiscus sinensis	93.18	0.00e+00	1150.00
IUUC-Pab-098252	Pongo abelii	98.14	0.00e+00	1238.00
IUUC-Pca-100827	Procavia capensis	98.03	0.00e+00	640.00
IUUC-Pva-102223	Pteropus vampyrus	92.71	0.00e+00	1150.00
IUUC-Rno-105683	Rattus norvegicus	98.91	0.00e+00	1238.00
IUUC-Sja-107798	Schizosaccharomyces japonicus	25.11	6.00e-30	125.00
IUUC-Ssc-115238	Sus scrofa	97.59	0.00e+00	1085.00
IUUC-Tgu-117310	Taeniopygia guttata	89.29	0.00e+00	967.00
IUUC-Tsy-119423	Tarsius syrichta	83.88	0.00e+00	971.00
IUUC-Ttr-129188	Tursiops truncatus	98.29	0.00e+00	1239.00
IUUC-Xtr-132370	Xenopus tropicalis	88.49	0.00e+00	964.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence