iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112904

Ensembl Protein ID

PGSC0003DMT400083129

UniProt Accession

M1D6J7; M1D6J7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400033067	PGSC0003DMT400083129	PGSC0003DMT400083129

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.60e-25	89.5	1305	1633

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkkea 81
           tGlkN      C++N ++Q+L++++++r+++l++ +++ ++      + +++++l ++f++l     + +++a++p++l  al+++ 
   Q: 1305 TGLKNEvgEYNCFLNVIIQSLWHLRQFRDDFLRRSSSEHDHV----GDPCVVCALYDIFTALNtastEMQREAIAPTSLRIALSNLY 1387
           58888733347**********************666555554....57899999999999997666688899*******99999998 PP
   S: 82   ee...fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssr 165
           +    f++ + +Da+E+l ++++ l++++++  +  ++++    +s+ s+   + + +++ + ++ lF++ + +++ c +c+ +s r
   Q: 1388 PDsnfFQEAQMNDASEVLGVIFNCLHRSFTS--TLGRSDA----ESADSSCTGSWDCSSSACAVHSLFGMDIFERMNCYNCGLES-R 1467
           875557799********************33..2222222....33334456677899999*********************998.6 PP
   S: 166  eepfldlslpvpgkeetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksr 246
           + + +++  +++ +  + ++      s++++L+    +++l ++   +   c+k+      + l+  P++++  L + +  e+ +  
   Q: 1468 HLKYTSFFHNINASALRTMKvmcpesSFDELLNLVEMNHQLACD--PEVGGCEKLN--YIHHILSAPPHIFTTVLGWQNTCEDVDDI 1550
           66788899999977776655777777999999999999999986..5667777666..34577999999******999665553333 PP
   S: 247  ekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevk.eeevleetg...s 328
           +   + ++   e+d+           + k+k +Li+vv+++G     HY++++++ ++g+Wl +dD++V+++  +++vl +++    
   Q: 1551 KATLSALS--TEVDIGVLYRG----LDPKNKHRLISVVCYYG----QHYHCFAYShDRGQWLMYDDKTVKVIGgWDDVLVMCErghL 1627
           33333333..44777643333....2337899**********....9******9945566***********9547888876665555 PP
   S: 329  taYvlf 334
           ++ vlf
   Q: 1628 QPQVLF 1633
           555555 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGHKKRTVAP RSKPSSSPAA VSEDGSPPSI DADLKLVSTI PSITNGSLSR NDALAVNDYE 60
NNSSSSSASY ASIKLECERA LTSLRRGNHT KALRLMKDLS TKHGNSPHSA LIHRVQGTVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAACAGTA CATCGCCTTC CCACCTACCT ACCCCCGTAA ATCTTCAACC TCTATTTACC 60
CCCTACCCCC GCCCCGAGAG TGACACTATC CATACGTAAC TACCTATACA TATATATAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

sot:102605106

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	53.39	2.00e-64	238.00
IUUC-Aml-001414	Ailuropoda melanoleuca	32.56	2.00e-39	157.00
IUUC-Atr-002451	Amborella trichopoda	48.35	0.00e+00	845.00
IUUC-Apl-003843	Anas platyrhynchos	31.32	3.00e-37	149.00
IUUC-Aca-004351	Anolis carolinensis	32.56	3.00e-39	157.00
IUUC-Aly-005468	Arabidopsis lyrata	55.80	0.00e+00	1576.00
IUUC-Ath-006682	Arabidopsis thaliana	55.57	0.00e+00	1650.00
IUUC-Ame-010673	Astyanax mexicanus	31.13	1.00e-40	160.00
IUUC-Bta-013344	Bos taurus	32.56	2.00e-39	157.00
IUUC-Bdi-015058	Brachypodium distachyon	40.13	5.00e-169	587.00
IUUC-Bol-015670	Brassica oleracea	70.96	7.00e-153	533.00
IUUC-Bra-016731	Brassica rapa	54.06	0.00e+00	1583.00
IUUC-Cja-018724	Callithrix jacchus	32.56	1.00e-39	157.00
IUUC-Cfa-021222	Canis familiaris	31.69	2.00e-39	157.00
IUUC-Cpo-021795	Cavia porcellus	32.56	1.00e-39	157.00
IUUC-Cre-022697	Chlamydomonas reinhardtii	32.49	3.00e-39	157.00
IUUC-Csa-023262	Chlorocebus sabaeus	32.56	2.00e-39	157.00
IUUC-Cho-024422	Choloepus hoffmanni	31.21	1.00e-34	141.00
IUUC-Cin-025752	Ciona intestinalis	31.65	4.00e-13	65.90
IUUC-Csv-026063	Ciona savignyi	29.29	2.00e-31	128.00
IUUC-Dre-028438	Danio rerio	31.48	2.00e-41	163.00
IUUC-Dno-029317	Dasypus novemcinctus	31.04	9.00e-37	148.00
IUUC-Dor-030249	Dipodomys ordii	31.32	2.00e-37	150.00
IUUC-Dme-032071	Drosophila melanogaster	30.97	1.00e-39	158.00
IUUC-Ete-032403	Echinops telfairi	31.78	3.00e-38	152.00
IUUC-Eca-033235	Equus caballus	32.27	4.00e-39	156.00
IUUC-Eeu-035319	Erinaceus europaeus	31.00	2.00e-18	87.00
IUUC-Fca-036070	Felis catus	32.56	2.00e-39	157.00
IUUC-Fal-037089	Ficedula albicollis	32.24	7.00e-41	162.00
IUUC-Gmo-039688	Gadus morhua	30.14	2.00e-36	144.00
IUUC-Gga-041241	Gallus gallus	32.51	2.00e-41	164.00
IUUC-Gac-042157	Gasterosteus aculeatus	31.58	4.00e-39	155.00
IUUC-Gma-043691	Glycine max	56.76	0.00e+00	1693.00
IUUC-Ggo-045626	Gorilla gorilla	32.56	2.00e-39	157.00
IUUC-Hsa-045767	Homo sapiens	32.56	2.00e-39	157.00
IUUC-Hvu-047657	Hordeum vulgare	55.63	8.00e-147	514.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	32.56	1.00e-39	157.00
IUUC-Lch-049712	Latimeria chalumnae	33.82	2.00e-39	155.00
IUUC-Lpe-051572	Leersia perrieri	41.11	0.00e+00	964.00
IUUC-Loc-052180	Lepisosteus oculatus	30.14	2.00e-39	156.00
IUUC-Laf-054578	Loxodonta africana	32.56	3.00e-39	157.00
IUUC-Mcc-054696	Macaca mulatta	32.56	1.00e-39	157.00
IUUC-Meu-056802	Macropus eugenii	26.92	1.00e-25	111.00
IUUC-Mtr-058682	Medicago truncatula	53.98	0.00e+00	1562.00
IUUC-Mga-059684	Meleagris gallopavo	28.49	2.00e-29	124.00
IUUC-Mmr-060701	Microcebus murinus	32.56	3.00e-39	157.00
IUUC-Mdo-062433	Monodelphis domestica	32.36	2.00e-38	154.00
IUUC-Mmu-063480	Mus musculus	32.30	2.00e-40	160.00
IUUC-Mac-064469	Musa acuminata	49.08	0.00e+00	645.00
IUUC-Mpu-066404	Mustela putorius furo	32.56	1.00e-39	158.00
IUUC-Mlu-067841	Myotis lucifugus	31.69	2.00e-39	157.00
IUUC-Nle-070110	Nomascus leucogenys	32.56	7.00e-40	159.00
IUUC-Opr-070676	Ochotona princeps	28.44	3.00e-18	87.40
IUUC-Ont-072449	Oreochromis niloticus	30.85	1.00e-40	160.00
IUUC-Oan-073551	Ornithorhynchus anatinus	32.56	2.00e-39	157.00
IUUC-Ocu-074729	Oryctolagus cuniculus	32.27	5.00e-39	155.00
IUUC-Oba-075174	Oryza barthii	66.08	1.00e-131	464.00
IUUC-Obr-076268	Oryza brachyantha	56.53	3.00e-149	522.00
IUUC-Ogl-077138	Oryza glaberrima	60.99	4.00e-149	521.00
IUUC-Oin-079125	Oryza indica	60.76	6.00e-149	521.00
IUUC-Olo-080872	Oryza longistaminata	56.97	2.00e-133	469.00
IUUC-Opu-083823	Oryza punctata	60.72	4.00e-147	514.00
IUUC-Osa-085583	Oryza sativa	60.90	6.00e-148	516.00
IUUC-Ola-086742	Oryzias latipes	32.16	3.00e-41	162.00
IUUC-Oga-088920	Otolemur garnettii	32.56	2.00e-39	157.00
IUUC-Oar-089644	Ovis aries	32.56	2.00e-39	157.00
IUUC-Ptr-091530	Pan troglodytes	32.56	9.00e-40	158.00
IUUC-Pan-092190	Papio anubis	32.56	2.00e-39	157.00
IUUC-Psi-094022	Pelodiscus sinensis	31.98	5.00e-39	156.00
IUUC-Pma-094745	Petromyzon marinus	28.42	2.00e-31	129.00
IUUC-Ppa-095930	Physcomitrella patens	35.58	5.00e-154	538.00
IUUC-Pfo-096829	Poecilia formosa	31.04	4.00e-41	162.00
IUUC-Pab-097979	Pongo abelii	32.56	1.00e-39	157.00
IUUC-Pop-099539	Populus trichocarpa	60.84	0.00e+00	1742.00
IUUC-Pca-101005	Procavia capensis	31.23	2.00e-22	101.00
IUUC-Ppe-101918	Prunus persica	62.33	0.00e+00	1860.00
IUUC-Pva-103125	Pteropus vampyrus	32.27	1.00e-38	154.00
IUUC-Rno-105463	Rattus norvegicus	31.65	3.00e-39	157.00
IUUC-Sha-107164	Sarcophilus harrisii	32.36	5.00e-39	156.00
IUUC-Sit-110021	Setaria italica	61.90	2.00e-147	516.00
IUUC-Sly-111258	Solanum lycopersicum	96.64	0.00e+00	3165.00
IUUC-Sar-113376	Sorex araneus	30.85	4.00e-20	92.80
IUUC-Sbi-114345	Sorghum bicolor	43.85	0.00e+00	1129.00
IUUC-Ssc-115969	Sus scrofa	30.22	4.00e-36	145.00
IUUC-Tgu-116521	Taeniopygia guttata	32.24	3.00e-41	162.00
IUUC-Tru-118240	Takifugu rubripes	30.30	2.00e-34	138.00
IUUC-Tsy-119297	Tarsius syrichta	27.73	7.00e-25	108.00
IUUC-Tni-120116	Tetraodon nigroviridis	30.94	1.00e-36	145.00
IUUC-Tca-121692	Theobroma cacao	64.78	0.00e+00	1930.00
IUUC-Tae-125619	Triticum aestivum	39.54	3.00e-151	529.00
IUUC-Tur-126027	Triticum urartu	55.60	2.00e-146	513.00
IUUC-Tbe-127607	Tupaia belangeri	30.85	1.00e-37	150.00
IUUC-Ttr-128647	Tursiops truncatus	30.88	4.00e-32	132.00
IUUC-Vpa-130213	Vicugna pacos	31.69	2.00e-39	157.00
IUUC-Vvi-131652	Vitis vinifera	63.99	0.00e+00	1899.00
IUUC-Xtr-131831	Xenopus tropicalis	31.78	6.00e-42	165.00
IUUC-Xma-133162	Xiphophorus maculatus	32.07	5.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence