iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039931

Ensembl Protein ID

GGTG_05127T0

UniProt Accession

J3NV18; J3NV18_GAGT3

Genbank Protein ID

EJT75190.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

ADBI01000453

Gene Name

GGTG_05127

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_05127	GGTG_05127T0	GGTG_05127T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-34	114.1	55	91
UBD/Beta-Prp	3.70e-78	262.2	8	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW++ t ++l
   Q: 55   HDGPVRGIDFhKTqPLFVSGGDDYKIKVWSYQTRRCL 91
           99*********4459***************9999887 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           t +++++s+ + ++f+p++++++++  ++ti++wd+++g+l+ ++++h+++v+ ++f+++++++v+g++D+ ikvw+++t+ c+ tl+gh d+v+++
   Q: 8    TKFESKSSRAKGIAFHPKRPWILVALHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTV 104
           67889999***************************************************************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl............................... 166
            f+ +  +++s+s+d+tir+w++++++ +  t +gh++ ++c+++hp+++l+vs+slD+ vr+Wd+                               
   Q: 105  FFHHELPWIISASDDQTIRIWNWQNRSLIC-TMTGHNHYTMCAQFHPKDDLVVSASLDQSVRVWDIsglrkkhsaptsmsfedqmarnnqnqtdmfg 200
           *****************************9.*******************************************************99999999997 PP
   S: 167  ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           +t+ +++   +gh++ v++++f+++++ +vs+++d+ vklw +++++   v+t++gh +n +   f+p++++++s+++D++ir+Wdl +++ ++t++
   Q: 201  NTDAVVKFVLEGHDRGVNWVAFHPTMPLIVSAGDDRLVKLWRMSETKAweVDTCRGHFQNATGCLFHPHQDLIISAGEDKTIRVWDLNKRTAVQTFK 297
           777777666777********************************888778*********************************************** PP
   S: 262  lhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++ ++++ va+ +++ n +++g  d+ v+++kl++++p
   Q: 298  RESDRFWVVAA-HPEINLFAAG-HDNGVMVFKLERERP 333
           ***********.6666555555.478*******98775 PP

Organism

Gaeumannomyces graminis

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MASTGMLTKF ESKSSRAKGI AFHPKRPWIL VALHSSTIQL WDYRMGTLID RFEEHDGPVR 60
GIDFHKTQPL FVSGGDDYKI KVWSYQTRRC LFTLNGHLDY VRTVFFHHEL PWIISASDDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCGTTGCG ACTGCCAGCT GGAGGAACCT TACACAGGTG GCCTTTCTGA TCCCCCTTAT 60
TGTGCGCCGC CTCTGCAACC GAGCAGTCGG CTTCTGCCAA ACAACCACGC TGCCCTTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	54.47	0.00e+00	968.00
IUUC-Aml-001758	Ailuropoda melanoleuca	48.72	0.00e+00	1208.00
IUUC-Atr-002493	Amborella trichopoda	47.15	0.00e+00	1084.00
IUUC-Apl-003385	Anas platyrhynchos	44.23	0.00e+00	895.00
IUUC-Aca-005154	Anolis carolinensis	71.84	2.00e-93	333.00
IUUC-Aly-006020	Arabidopsis lyrata	54.20	0.00e+00	942.00
IUUC-Ath-007360	Arabidopsis thaliana	46.10	0.00e+00	1090.00
IUUC-Ago-007992	Ashbya gossypii	50.86	0.00e+00	1217.00
IUUC-Acl-008027	Aspergillus clavatus	73.94	0.00e+00	1873.00
IUUC-Afl-008644	Aspergillus flavus	75.62	0.00e+00	1883.00
IUUC-Afu-008964	Aspergillus fumigatus	74.92	0.00e+00	1907.00
IUUC-Ani-009379	Aspergillus nidulans	81.41	0.00e+00	1491.00
IUUC-Ang-009756	Aspergillus niger	75.39	0.00e+00	1901.00
IUUC-Aor-010174	Aspergillus oryzae	75.53	0.00e+00	1880.00
IUUC-Ate-010302	Aspergillus terreus	75.49	0.00e+00	1935.00
IUUC-Ame-011229	Astyanax mexicanus	56.18	0.00e+00	1019.00
IUUC-Bgr-012300	Blumeria graminis	77.92	0.00e+00	1943.00
IUUC-Bta-012524	Bos taurus	49.07	0.00e+00	1203.00
IUUC-Bci-013781	Botrytis cinerea	83.59	0.00e+00	2101.00
IUUC-Bdi-014549	Brachypodium distachyon	46.25	0.00e+00	1098.00
IUUC-Bol-015925	Brassica oleracea	54.62	0.00e+00	947.00
IUUC-Bra-016978	Brassica rapa	54.19	0.00e+00	942.00
IUUC-Cel-018115	Caenorhabditis elegans	51.43	0.00e+00	889.00
IUUC-Cja-019107	Callithrix jacchus	47.71	0.00e+00	1186.00
IUUC-Cfa-020675	Canis familiaris	48.41	0.00e+00	1180.00
IUUC-Cpo-021813	Cavia porcellus	48.91	0.00e+00	1215.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	56.26	0.00e+00	997.00
IUUC-Csa-023523	Chlorocebus sabaeus	48.91	0.00e+00	1218.00
IUUC-Cho-024704	Choloepus hoffmanni	36.63	8.00e-142	496.00
IUUC-Cin-025572	Ciona intestinalis	46.65	0.00e+00	1149.00
IUUC-Csv-025864	Ciona savignyi	54.06	0.00e+00	944.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	87.53	0.00e+00	2150.00
IUUC-Cne-027053	Cryptococcus neoformans	54.41	0.00e+00	1323.00
IUUC-Cme-027222	Cyanidioschyzon merolae	38.86	2.00e-139	489.00
IUUC-Dre-027421	Danio rerio	49.35	0.00e+00	1212.00
IUUC-Dno-029303	Dasypus novemcinctus	49.03	0.00e+00	1216.00
IUUC-Dor-030290	Dipodomys ordii	45.61	8.00e-146	509.00
IUUC-Dse-031543	Dothistroma septosporum	74.94	0.00e+00	1814.00
IUUC-Dme-031945	Drosophila melanogaster	47.63	0.00e+00	1145.00
IUUC-Ete-032873	Echinops telfairi	46.48	0.00e+00	1057.00
IUUC-Eca-033773	Equus caballus	47.64	0.00e+00	1164.00
IUUC-Eeu-034874	Erinaceus europaeus	36.69	3.00e-163	568.00
IUUC-Fca-035739	Felis catus	48.01	0.00e+00	1191.00
IUUC-Fal-037263	Ficedula albicollis	45.70	0.00e+00	1068.00
IUUC-Fox-037738	Fusarium oxysporum	86.55	0.00e+00	2217.00
IUUC-Fso-038153	Fusarium solani	86.46	0.00e+00	2185.00
IUUC-Gmo-039602	Gadus morhua	46.62	0.00e+00	1113.00
IUUC-Gga-040590	Gallus gallus	49.11	0.00e+00	1211.00
IUUC-Gac-041318	Gasterosteus aculeatus	48.56	0.00e+00	1184.00
IUUC-Gma-043894	Glycine max	47.17	0.00e+00	1120.00
IUUC-Ggo-045029	Gorilla gorilla	48.56	0.00e+00	1209.00
IUUC-Hsa-046078	Homo sapiens	48.60	0.00e+00	1211.00
IUUC-Hvu-047556	Hordeum vulgare	46.36	0.00e+00	1108.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	40.02	0.00e+00	644.00
IUUC-Kpa-049256	Komagataella pastoris	52.94	0.00e+00	1336.00
IUUC-Lch-049706	Latimeria chalumnae	48.51	0.00e+00	1189.00
IUUC-Lpe-051316	Leersia perrieri	54.14	0.00e+00	959.00
IUUC-Loc-051867	Lepisosteus oculatus	38.14	0.00e+00	802.00
IUUC-Lma-053138	Leptosphaeria maculans	74.20	0.00e+00	1896.00
IUUC-Laf-053510	Loxodonta africana	48.91	0.00e+00	1220.00
IUUC-Mcc-055836	Macaca mulatta	48.67	0.00e+00	1206.00
IUUC-Meu-056238	Macropus eugenii	51.03	0.00e+00	708.00
IUUC-Mor-057172	Magnaporthe oryzae	89.43	0.00e+00	2273.00
IUUC-Mpo-057300	Magnaporthe poae	97.13	0.00e+00	2380.00
IUUC-Mtr-058248	Medicago truncatula	46.75	0.00e+00	1123.00
IUUC-Mla-059019	Melampsora laricipopulina	56.07	0.00e+00	1396.00
IUUC-Mga-059499	Meleagris gallopavo	49.11	0.00e+00	1208.00
IUUC-Mvi-060336	Microbotryum violaceum	55.63	0.00e+00	1369.00
IUUC-Mmr-061102	Microcebus murinus	48.18	0.00e+00	1202.00
IUUC-Mdo-062594	Monodelphis domestica	48.91	0.00e+00	1224.00
IUUC-Mmu-063736	Mus musculus	48.51	0.00e+00	1205.00
IUUC-Mac-065398	Musa acuminata	43.23	0.00e+00	996.00
IUUC-Mpu-066701	Mustela putorius furo	48.75	0.00e+00	1208.00
IUUC-Mlu-067392	Myotis lucifugus	48.66	0.00e+00	1209.00
IUUC-Nfi-068270	Neosartorya fischeri	74.19	0.00e+00	1883.00
IUUC-Ncr-068892	Neurospora crassa	86.32	0.00e+00	2148.00
IUUC-Nle-069634	Nomascus leucogenys	59.40	0.00e+00	872.00
IUUC-Opr-070952	Ochotona princeps	37.04	3.00e-164	571.00
IUUC-Ont-072488	Oreochromis niloticus	48.21	0.00e+00	1188.00
IUUC-Ocu-074211	Oryctolagus cuniculus	48.83	0.00e+00	1211.00
IUUC-Oba-075761	Oryza barthii	54.44	0.00e+00	963.00
IUUC-Obr-076429	Oryza brachyantha	54.20	0.00e+00	961.00
IUUC-Ogl-077364	Oryza glaberrima	54.44	0.00e+00	963.00
IUUC-Ogu-078257	Oryza glumaepatula	54.32	0.00e+00	959.00
IUUC-Oin-079274	Oryza indica	54.32	0.00e+00	961.00
IUUC-Olo-080466	Oryza longistaminata	54.57	0.00e+00	954.00
IUUC-Ome-081993	Oryza meridionalis	51.33	0.00e+00	920.00
IUUC-Oni-082874	Oryza nivara	54.26	0.00e+00	961.00
IUUC-Opu-083885	Oryza punctata	54.26	0.00e+00	961.00
IUUC-Oru-084274	Oryza rufipogon	54.32	0.00e+00	961.00
IUUC-Osa-085565	Oryza sativa	54.32	0.00e+00	961.00
IUUC-Ola-086921	Oryzias latipes	47.81	0.00e+00	1181.00
IUUC-Olu-087639	Ostreococcus lucimarinus	47.83	0.00e+00	1140.00
IUUC-Oga-087991	Otolemur garnettii	46.52	0.00e+00	1137.00
IUUC-Oar-089590	Ovis aries	49.11	0.00e+00	1216.00
IUUC-Ptr-090808	Pan troglodytes	48.56	0.00e+00	1210.00
IUUC-Pan-092475	Papio anubis	48.55	0.00e+00	1207.00
IUUC-Psi-093044	Pelodiscus sinensis	51.81	0.00e+00	851.00
IUUC-Pno-094839	Phaeosphaeria nodorum	73.70	0.00e+00	1820.00
IUUC-Ppa-095254	Physcomitrella patens	50.08	0.00e+00	1206.00
IUUC-Pfo-097493	Poecilia formosa	48.22	0.00e+00	1182.00
IUUC-Pab-098497	Pongo abelii	48.83	0.00e+00	1218.00
IUUC-Pop-099992	Populus trichocarpa	47.89	0.00e+00	1114.00
IUUC-Pca-100413	Procavia capensis	53.23	2.00e-180	624.00
IUUC-Ppe-101899	Prunus persica	55.10	0.00e+00	966.00
IUUC-Pva-102126	Pteropus vampyrus	64.30	2.00e-177	615.00
IUUC-Pgr-103376	Puccinia graminis	56.10	0.00e+00	1418.00
IUUC-Ptt-103978	Puccinia triticina	50.53	0.00e+00	1197.00
IUUC-Pte-104126	Pyrenophora teres	72.66	0.00e+00	1796.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	65.37	0.00e+00	1384.00
IUUC-Rno-105428	Rattus norvegicus	49.07	0.00e+00	1217.00
IUUC-Sce-106464	Saccharomyces cerevisiae	49.67	0.00e+00	1201.00
IUUC-Sha-107301	Sarcophilus harrisii	48.53	0.00e+00	1189.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	51.76	0.00e+00	1326.00
IUUC-Spo-108217	Schizosaccharomyces pombe	54.60	0.00e+00	1402.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	83.92	0.00e+00	2106.00
IUUC-Smo-109582	Selaginella moellendorffii	55.41	0.00e+00	995.00
IUUC-Sit-109697	Setaria italica	53.99	0.00e+00	961.00
IUUC-Sly-111759	Solanum lycopersicum	46.87	0.00e+00	1123.00
IUUC-Stu-112564	Solanum tuberosum	46.62	0.00e+00	1122.00
IUUC-Sar-113313	Sorex araneus	39.73	2.00e-154	537.00
IUUC-Sbi-114388	Sorghum bicolor	53.99	0.00e+00	962.00
IUUC-Sre-115209	Sporisorium reilianum	62.51	0.00e+00	1139.00
IUUC-Ssc-115933	Sus scrofa	48.91	0.00e+00	1213.00
IUUC-Tgu-117109	Taeniopygia guttata	38.06	3.00e-90	324.00
IUUC-Tru-117772	Takifugu rubripes	47.84	0.00e+00	1169.00
IUUC-Tsy-119105	Tarsius syrichta	47.27	0.00e+00	937.00
IUUC-Tni-120556	Tetraodon nigroviridis	36.56	0.00e+00	756.00
IUUC-Tca-121545	Theobroma cacao	55.89	0.00e+00	969.00
IUUC-Tre-121951	Trichoderma reesei	83.35	0.00e+00	2083.00
IUUC-Tvi-122359	Trichoderma virens	83.18	0.00e+00	2115.00
IUUC-Tae-123688	Triticum aestivum	46.52	0.00e+00	1110.00
IUUC-Tur-126754	Triticum urartu	47.03	0.00e+00	1103.00
IUUC-Tme-127170	Tuber melanosporum	74.24	0.00e+00	1914.00
IUUC-Tbe-127882	Tupaia belangeri	63.14	8.00e-122	430.00
IUUC-Ttr-128217	Tursiops truncatus	47.11	0.00e+00	1147.00
IUUC-Uma-129337	Ustilago maydis	61.88	0.00e+00	1131.00
IUUC-Vda-129828	Verticillium dahliae	83.14	0.00e+00	2091.00
IUUC-Vpa-130537	Vicugna pacos	48.39	0.00e+00	1194.00
IUUC-Vvi-130958	Vitis vinifera	55.38	0.00e+00	971.00
IUUC-Xtr-132857	Xenopus tropicalis	47.35	0.00e+00	1134.00
IUUC-Xma-133138	Xiphophorus maculatus	48.38	0.00e+00	1187.00
IUUC-Yli-134399	Yarrowia lipolytica	52.47	0.00e+00	1235.00
IUUC-Zma-135612	Zea mays	46.15	0.00e+00	1103.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence