iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037249

Ensembl Protein ID

ENSFALP00000014543.1

UniProt Accession

U3KHN9; U3KHN9_FICAL

Genbank Protein ID

ENSFALP00000014543

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011415

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000013937.1	ENSFALT00000014605.1	ENSFALP00000014543.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-07	29.0	68	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gHt+ +tcl++  s+ +l+s+  Dg ik+W+++++
   Q: 68   GHTEVITCLEWdqSGSRLLSADADGHIKCWSMTDH 102
           8**********965599**************9876 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MDLAYVCEWE KKPKSNHCPS IPLVCAWSCR NLIAFTTDLR NEEEKDLTHM VHIIDTEHPW 60
DVYSVNSGHT EVITCLEWDQ SGSRLLSADA DGHIKCWSMT DHLANSWENT VGSVVEGDPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCG GGCCGGCGGG ATGGACCTGG CGTACGTGTG CGAGTGGGAG AAGAAGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

KEGG

fab:101807993

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	75.00	0.00e+00	1257.00
IUUC-Bta-012729	Bos taurus	83.35	0.00e+00	1432.00
IUUC-Cja-019000	Callithrix jacchus	82.38	7.00e-86	309.00
IUUC-Cfa-020876	Canis familiaris	85.89	0.00e+00	1484.00
IUUC-Cpo-021655	Cavia porcellus	84.82	0.00e+00	1448.00
IUUC-Dre-027473	Danio rerio	77.92	0.00e+00	1337.00
IUUC-Dno-029564	Dasypus novemcinctus	85.15	0.00e+00	1008.00
IUUC-Eca-033914	Equus caballus	86.53	0.00e+00	861.00
IUUC-Fca-036338	Felis catus	87.13	0.00e+00	794.00
IUUC-Gmo-039447	Gadus morhua	73.33	6.00e-174	604.00
IUUC-Gga-041100	Gallus gallus	96.69	0.00e+00	1573.00
IUUC-Gac-042603	Gasterosteus aculeatus	61.68	0.00e+00	1005.00
IUUC-Ggo-044794	Gorilla gorilla	86.86	0.00e+00	1107.00
IUUC-Hsa-045722	Homo sapiens	86.32	0.00e+00	781.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	84.42	0.00e+00	1455.00
IUUC-Loc-052871	Lepisosteus oculatus	81.29	0.00e+00	1373.00
IUUC-Mcc-055201	Macaca mulatta	87.02	0.00e+00	1106.00
IUUC-Mga-059807	Meleagris gallopavo	92.33	0.00e+00	1540.00
IUUC-Mmr-060781	Microcebus murinus	84.67	0.00e+00	1479.00
IUUC-Mpu-066388	Mustela putorius furo	85.02	0.00e+00	1464.00
IUUC-Ont-072316	Oreochromis niloticus	78.37	0.00e+00	1325.00
IUUC-Ola-086721	Oryzias latipes	76.23	0.00e+00	1277.00
IUUC-Oga-088875	Otolemur garnettii	86.78	0.00e+00	1472.00
IUUC-Oar-090444	Ovis aries	85.04	0.00e+00	1464.00
IUUC-Ptr-091117	Pan troglodytes	82.66	0.00e+00	768.00
IUUC-Pan-091807	Papio anubis	85.15	0.00e+00	1380.00
IUUC-Pfo-097356	Poecilia formosa	78.12	0.00e+00	1328.00
IUUC-Pab-097953	Pongo abelii	84.59	0.00e+00	1070.00
IUUC-Pca-100896	Procavia capensis	85.05	0.00e+00	1439.00
IUUC-Rno-105038	Rattus norvegicus	84.58	0.00e+00	1452.00
IUUC-Tgu-116750	Taeniopygia guttata	99.28	0.00e+00	1699.00
IUUC-Tru-118405	Takifugu rubripes	77.98	0.00e+00	1348.00
IUUC-Tni-120217	Tetraodon nigroviridis	80.60	0.00e+00	1043.00
IUUC-Ttr-129222	Tursiops truncatus	84.44	0.00e+00	1410.00
IUUC-Xtr-132084	Xenopus tropicalis	84.12	0.00e+00	1386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence