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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105718
UUCD1 version UUC-RaN-00565
Ensembl Protein ID ENSRNOP00000072463.1
UniProt Accession A0A0G2K313; A0A0G2K313_RAT
Genbank Protein ID ENSRNOP00000072463
Protein Name LON peptidase N-terminal domain and ring finger 1
Genbank Nucleotide ID AABR07026024
Gene Name Lonrf1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000053706.1 ENSRNOT00000083434.1 ENSRNOP00000072463.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 1.90e-09 37.8 535 582
E3 activity/RING/RING 2.60e-09 37.9 539 577
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 535  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKE 582
           68***********************************9.*******986 PP
   

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 539  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHAPYCPLCK 577
           **********.9**************999......9*********6 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
VSGGRARKPR PAPLRLAKPP LSPGPAPRGS PGARRPAMSA RHAPLLAGRV RSRAPRRFPD 60
RGGGRRRRSS PARAMSSPAV ARASPGGNRE TAGGPRSRNG PWEVGGGERL ERAGAEPGRW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105718|E3,U-box;E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGTCGGGAG GCCGGGCGCG GAAGCCAAGG CCCGCCCCTC TCCGTCTCGC TAAGCTCCGC 60
CCCTCTCCCC AGGCCCCGCC CCTAGGGGCT CCCCGGGCGC GCGCCGCCCC GCCATGTCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105718|E3,U-box;E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX
SMART

SM00464--LON
SM00184--RING
SM00028--TPR
Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001989 Ailuropoda melanoleuca 88.39 0.00e+00 953.00
IUUC-Atr-002972 Amborella trichopoda 42.03 2.00e-43 169.00
IUUC-Apl-003309 Anas platyrhynchos 79.90 0.00e+00 627.00
IUUC-Aca-004288 Anolis carolinensis 63.35 0.00e+00 838.00
IUUC-Aly-005476 Arabidopsis lyrata 35.58 1.00e-39 157.00
IUUC-Ath-006654 Arabidopsis thaliana 35.96 4.00e-40 159.00
IUUC-Ang-009643 Aspergillus niger 30.08 2.00e-39 157.00
IUUC-Ate-010489 Aspergillus terreus 31.91 3.00e-38 152.00
IUUC-Ame-010716 Astyanax mexicanus 50.48 0.00e+00 640.00
IUUC-Bta-012903 Bos taurus 85.21 0.00e+00 1012.00
IUUC-Bdi-014333 Brachypodium distachyon 41.26 8.00e-43 167.00
IUUC-Bol-016150 Brassica oleracea 35.63 1.00e-40 160.00
IUUC-Bra-016716 Brassica rapa 34.18 6.00e-38 152.00
IUUC-Cel-018356 Caenorhabditis elegans 33.33 9.00e-10 56.20
IUUC-Cja-019312 Callithrix jacchus 87.86 0.00e+00 1102.00
IUUC-Cfa-020159 Canis familiaris 84.66 0.00e+00 1049.00
IUUC-Cpo-022528 Cavia porcellus 90.81 0.00e+00 962.00
IUUC-Cre-022730 Chlamydomonas reinhardtii 27.70 4.00e-08 52.00
IUUC-Csa-023361 Chlorocebus sabaeus 80.60 0.00e+00 1031.00
IUUC-Cho-024549 Choloepus hoffmanni 80.64 0.00e+00 804.00
IUUC-Cgl-026514 Colletotrichum gloeosporioides 31.38 2.00e-44 174.00
IUUC-Cme-027153 Cyanidioschyzon merolae 30.35 2.00e-28 120.00
IUUC-Dre-028195 Danio rerio 50.41 0.00e+00 640.00
IUUC-Dno-029284 Dasypus novemcinctus 89.14 0.00e+00 968.00
IUUC-Dor-031123 Dipodomys ordii 78.54 0.00e+00 702.00
IUUC-Ete-032455 Echinops telfairi 87.59 0.00e+00 724.00
IUUC-Eca-033248 Equus caballus 91.14 0.00e+00 726.00
IUUC-Eeu-034441 Erinaceus europaeus 87.26 0.00e+00 756.00
IUUC-Fca-035551 Felis catus 88.58 0.00e+00 974.00
IUUC-Fal-036731 Ficedula albicollis 74.76 0.00e+00 807.00
IUUC-Gmo-039315 Gadus morhua 46.91 2.00e-166 579.00
IUUC-Gga-040888 Gallus gallus 76.44 0.00e+00 658.00
IUUC-Gac-042121 Gasterosteus aculeatus 52.19 0.00e+00 643.00
IUUC-Gma-042919 Glycine max 32.99 7.00e-38 151.00
IUUC-Ggo-044985 Gorilla gorilla 88.68 0.00e+00 1000.00
IUUC-Hsa-046592 Homo sapiens 85.90 0.00e+00 1071.00
IUUC-Hvu-047145 Hordeum vulgare 40.65 7.00e-25 107.00
IUUC-Itr-048573 Ictidomys tridecemlineatus 89.60 0.00e+00 1033.00
IUUC-Lch-050404 Latimeria chalumnae 56.93 0.00e+00 727.00
IUUC-Laf-053431 Loxodonta africana 88.95 0.00e+00 964.00
IUUC-Mcc-055751 Macaca mulatta 86.31 0.00e+00 965.00
IUUC-Mor-056963 Magnaporthe oryzae 41.71 2.00e-41 163.00
IUUC-Mla-058946 Melampsora laricipopulina 34.45 1.00e-44 174.00
IUUC-Mvi-060228 Microbotryum violaceum 33.66 2.00e-45 177.00
IUUC-Mmr-061283 Microcebus murinus 87.00 0.00e+00 1081.00
IUUC-Mmu-063169 Mus musculus 95.56 0.00e+00 1121.00
IUUC-Mac-065566 Musa acuminata 37.66 5.00e-43 169.00
IUUC-Mpu-066537 Mustela putorius furo 83.92 0.00e+00 1071.00
IUUC-Mlu-067497 Myotis lucifugus 88.76 0.00e+00 968.00
IUUC-Nle-068971 Nomascus leucogenys 90.43 0.00e+00 956.00
IUUC-Opr-070791 Ochotona princeps 89.31 0.00e+00 867.00
IUUC-Ont-071548 Oreochromis niloticus 52.31 0.00e+00 657.00
IUUC-Oan-072747 Ornithorhynchus anatinus 81.09 0.00e+00 674.00
IUUC-Ocu-074928 Oryctolagus cuniculus 92.15 0.00e+00 749.00
IUUC-Oba-075239 Oryza barthii 40.69 5.00e-43 168.00
IUUC-Obr-076158 Oryza brachyantha 40.64 6.00e-45 175.00
IUUC-Ogu-078154 Oryza glumaepatula 41.18 1.00e-43 171.00
IUUC-Oin-079067 Oryza indica 40.69 3.00e-43 169.00
IUUC-Olo-080663 Oryza longistaminata 40.69 7.00e-43 167.00
IUUC-Oni-082119 Oryza nivara 40.69 4.00e-43 169.00
IUUC-Opu-083266 Oryza punctata 35.29 2.00e-31 130.00
IUUC-Oru-085190 Oryza rufipogon 40.69 8.00e-43 168.00
IUUC-Ola-086977 Oryzias latipes 52.05 0.00e+00 663.00
IUUC-Oga-088719 Otolemur garnettii 84.68 0.00e+00 1088.00
IUUC-Oar-089577 Ovis aries 89.55 0.00e+00 987.00
IUUC-Ptr-090711 Pan troglodytes 85.38 0.00e+00 1074.00
IUUC-Pan-092587 Papio anubis 80.60 0.00e+00 1060.00
IUUC-Psi-093128 Pelodiscus sinensis 72.49 0.00e+00 825.00
IUUC-Pfo-096474 Poecilia formosa 52.05 0.00e+00 656.00
IUUC-Pab-097800 Pongo abelii 85.61 0.00e+00 1026.00
IUUC-Pop-100044 Populus trichocarpa 34.27 4.00e-43 169.00
IUUC-Ppe-101621 Prunus persica 38.74 2.00e-36 147.00
IUUC-Sit-110495 Setaria italica 39.04 4.00e-43 169.00
IUUC-Sly-111396 Solanum lycopersicum 33.90 1.00e-41 164.00
IUUC-Sar-113220 Sorex araneus 85.28 0.00e+00 687.00
IUUC-Sbi-114779 Sorghum bicolor 38.07 4.00e-29 122.00
IUUC-Sre-114977 Sporisorium reilianum 31.90 6.00e-36 146.00
IUUC-Ssc-115733 Sus scrofa 82.16 0.00e+00 1071.00
IUUC-Tgu-117431 Taeniopygia guttata 69.97 0.00e+00 848.00
IUUC-Tru-118274 Takifugu rubripes 50.35 4.00e-176 611.00
IUUC-Tsy-119043 Tarsius syrichta 89.87 0.00e+00 955.00
IUUC-Tni-120766 Tetraodon nigroviridis 49.63 4.00e-166 578.00
IUUC-Tca-121632 Theobroma cacao 31.60 9.00e-44 171.00
IUUC-Tae-125900 Triticum aestivum 34.72 6.00e-45 175.00
IUUC-Tur-126297 Triticum urartu 40.74 3.00e-32 132.00
IUUC-Tme-127112 Tuber melanosporum 35.31 2.00e-45 176.00
IUUC-Tbe-127284 Tupaia belangeri 87.26 0.00e+00 734.00
IUUC-Vda-129721 Verticillium dahliae 34.52 1.00e-35 144.00
IUUC-Vpa-130408 Vicugna pacos 80.64 0.00e+00 839.00
IUUC-Xtr-132417 Xenopus tropicalis 57.10 0.00e+00 706.00
IUUC-Xma-134099 Xiphophorus maculatus 50.98 0.00e+00 651.00
Created Date 25-Jun-2017

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