iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000015115.2	ENSLACT00000024941.1	ENSLACP00000023232.1
ENSLACG00000015115.2	ENSLACT00000017281.1	ENSLACP00000017155.1
ENSLACG00000015115.2	ENSLACT00000017282.1	ENSLACP00000017156.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-29	99.4	714	751
UBD/Beta-Prp	3.00e-46	158.2	634	788

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d vt+la  ++  +l sGs+D++i++W+l + ++++
   Q: 714  HLDAVTSLAVdPNgLYLMSGSHDCSIRLWNLESKTCIQ 751
           99*********77799***************9999987 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheae......vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           s d  +l++++ +g + +++++t++ + +l+++++       ++ v  +p+ +i +t++eDr+ik +d +tgk +h++ +h d v+sl+
   Q: 634  SSDPAHLVASFNTGQTGIFNMETQQRILTLESNSDNansfcqINRVISHPTLPISITAHEDRHIKFFDNNTGKLIHSMVAHLDAVTSLA 722
           66788999**********************99999978888888888899999************************************ PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           ++p+g +l sGshd  ir+w+le+++c++e     ++ d+++  v++hp++++++s+++D   +++
   Q: 723  VDPNGLYLMSGSHDCSIRLWNLESKTCIQEftaHRKKFDESIHDVAFHPSKCYIASAGADALAKVF 788
           *****************************87766677788999*****************988887 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLT GSCAAGGGGK GSSGPLAEGG GEAVAVAAVA TRAQYSIPGI 60
LHFLQHEWAR FEMERAQWEV DRAELQAQIA FLQGERKGQE NLKKDLVRRI KMLEYALKQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGTGACGTT GGAGACTGCT GTCATCCTGA ACGCGCCCAG TGGGGGTCCG GTGAGCTTGT 60
GTAGGCAGAG TAGCGGATAA ACTAACCGTC GCAGCGGAGA AGCGGGTCGC TGCGATTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

lcm:102350785

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	84.30	0.00e+00	1186.00
IUUC-Apl-003927	Anas platyrhynchos	84.02	0.00e+00	1054.00
IUUC-Aca-004933	Anolis carolinensis	78.39	0.00e+00	1106.00
IUUC-Ame-010997	Astyanax mexicanus	74.28	0.00e+00	1072.00
IUUC-Bta-013077	Bos taurus	84.26	0.00e+00	1167.00
IUUC-Cja-018973	Callithrix jacchus	84.40	0.00e+00	1169.00
IUUC-Cfa-020988	Canis familiaris	80.71	0.00e+00	1065.00
IUUC-Cpo-022496	Cavia porcellus	83.85	0.00e+00	1173.00
IUUC-Csa-023829	Chlorocebus sabaeus	84.40	0.00e+00	1169.00
IUUC-Dre-028560	Danio rerio	69.18	0.00e+00	972.00
IUUC-Dno-029742	Dasypus novemcinctus	79.51	0.00e+00	1121.00
IUUC-Dor-030721	Dipodomys ordii	77.34	0.00e+00	1062.00
IUUC-Eca-033760	Equus caballus	83.55	0.00e+00	1092.00
IUUC-Eeu-034953	Erinaceus europaeus	88.02	0.00e+00	685.00
IUUC-Fca-036530	Felis catus	83.83	0.00e+00	1117.00
IUUC-Fal-037353	Ficedula albicollis	78.25	0.00e+00	836.00
IUUC-Gmo-039094	Gadus morhua	75.99	0.00e+00	729.00
IUUC-Gga-040132	Gallus gallus	83.38	0.00e+00	1071.00
IUUC-Gac-041713	Gasterosteus aculeatus	74.84	0.00e+00	1078.00
IUUC-Ggo-045455	Gorilla gorilla	76.65	0.00e+00	1007.00
IUUC-Hsa-046415	Homo sapiens	84.26	0.00e+00	1167.00
IUUC-Loc-051859	Lepisosteus oculatus	80.55	0.00e+00	1197.00
IUUC-Laf-053537	Loxodonta africana	83.85	0.00e+00	1194.00
IUUC-Mcc-055817	Macaca mulatta	84.40	0.00e+00	1169.00
IUUC-Meu-055946	Macropus eugenii	62.36	0.00e+00	773.00
IUUC-Mla-058988	Melampsora laricipopulina	35.87	8.00e-66	245.00
IUUC-Mga-059694	Meleagris gallopavo	83.71	0.00e+00	1047.00
IUUC-Mmr-060768	Microcebus murinus	84.53	0.00e+00	1169.00
IUUC-Mdo-061901	Monodelphis domestica	80.29	0.00e+00	1157.00
IUUC-Mmu-064154	Mus musculus	82.63	0.00e+00	1155.00
IUUC-Mpu-065827	Mustela putorius furo	79.35	0.00e+00	1179.00
IUUC-Mlu-067102	Myotis lucifugus	83.58	0.00e+00	1160.00
IUUC-Ncr-068831	Neurospora crassa	40.59	2.00e-22	101.00
IUUC-Nle-070008	Nomascus leucogenys	84.26	0.00e+00	1102.00
IUUC-Opr-071067	Ochotona princeps	52.10	2.00e-148	519.00
IUUC-Ont-072025	Oreochromis niloticus	76.29	0.00e+00	1092.00
IUUC-Oan-072950	Ornithorhynchus anatinus	84.63	0.00e+00	1061.00
IUUC-Ocu-074316	Oryctolagus cuniculus	83.40	0.00e+00	1080.00
IUUC-Ola-087279	Oryzias latipes	73.40	0.00e+00	1051.00
IUUC-Oga-088284	Otolemur garnettii	84.67	0.00e+00	1201.00
IUUC-Oar-090304	Ovis aries	84.53	0.00e+00	1171.00
IUUC-Ptr-091052	Pan troglodytes	84.40	0.00e+00	1170.00
IUUC-Pan-092270	Papio anubis	81.24	0.00e+00	1136.00
IUUC-Psi-093907	Pelodiscus sinensis	83.65	0.00e+00	976.00
IUUC-Pfo-097042	Poecilia formosa	74.22	0.00e+00	1160.00
IUUC-Pab-098110	Pongo abelii	84.40	0.00e+00	1170.00
IUUC-Pca-100266	Procavia capensis	72.24	0.00e+00	807.00
IUUC-Pva-102824	Pteropus vampyrus	82.09	0.00e+00	1122.00
IUUC-Pgr-103483	Puccinia graminis	36.71	1.00e-55	211.00
IUUC-Ptt-103828	Puccinia triticina	37.31	5.00e-47	183.00
IUUC-Rno-105638	Rattus norvegicus	82.90	0.00e+00	1160.00
IUUC-Sha-107004	Sarcophilus harrisii	79.69	0.00e+00	1008.00
IUUC-Sre-115115	Sporisorium reilianum	34.37	6.00e-65	242.00
IUUC-Ssc-115280	Sus scrofa	84.53	0.00e+00	1170.00
IUUC-Tgu-116759	Taeniopygia guttata	83.99	0.00e+00	1062.00
IUUC-Tru-117944	Takifugu rubripes	75.78	0.00e+00	1076.00
IUUC-Tsy-119405	Tarsius syrichta	74.43	0.00e+00	913.00
IUUC-Tni-120571	Tetraodon nigroviridis	75.12	0.00e+00	1078.00
IUUC-Uma-129659	Ustilago maydis	35.22	2.00e-65	244.00
IUUC-Vpa-130294	Vicugna pacos	83.66	0.00e+00	1085.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence