iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074308

Ensembl Protein ID

ENSOCUP00000011720.2

UniProt Accession

G1T5S7; G1T5S7_RABIT

Protein Name

Uncharacterized protein

Gene Name

SNRNP25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000013614.2	ENSOCUT00000013618.2	ENSOCUP00000011720.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.20e-07	29.2	41	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKeki..............ekk.lgippeqqrLiykGkiL.eddktLadyglkdgst 66
           ++v+v  +dg ++++ v   +tV++LK+ i              ++  +++ ++  +L+ +G+ L ed k+L dyg+++++ 
   Q: 41   MTVRVSKMDGEVMPVVVVQNATVLDLKKAIqryvqlkqereggiQHIsWSYVWRTYHLTSAGEKLtEDRKKLRDYGIRNRDE 122
           7899**********************************9999996667999999899999999999***********99876 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

VDVFQEGLAM VVQDPLLCDL PIQVTLEEIN SQIALEYGQA MTVRVSKMDG EVMPVVVVQN 60
ATVLDLKKAI QRYVQLKQER EGGIQHISWS YVWRTYHLTS AGEKLTEDRK KLRDYGIRNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGACGTGT TCCAGGAGGG TCTCGCCATG GTGGTGCAGG ACCCGCTGCT CTGCGACCTG 60
CCGATCCAGG TGCGCGCGGC CAGAGCGGCC ACCTGCCGCC GGAGAGGTGC TGATGGGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005829--C:cytosol
GO:0045171--C:intercellular bridge
GO:0005654--C:nucleoplasm
GO:0005689--C:U12-type spliceosomal complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013418	Bos taurus	97.56	4.00e-68	249.00
IUUC-Bci-013773	Botrytis cinerea	41.94	4.80e-02	31.60
IUUC-Cja-019542	Callithrix jacchus	97.73	3.00e-73	266.00
IUUC-Cpo-021791	Cavia porcellus	97.73	1.00e-73	268.00
IUUC-Cin-025440	Ciona intestinalis	56.82	2.00e-41	161.00
IUUC-Dre-028229	Danio rerio	76.52	2.00e-61	227.00
IUUC-Eca-033616	Equus caballus	97.73	2.00e-73	267.00
IUUC-Gac-041795	Gasterosteus aculeatus	75.00	3.00e-59	220.00
IUUC-Ggo-045439	Gorilla gorilla	96.97	9.00e-73	265.00
IUUC-Hsa-045948	Homo sapiens	96.97	6.00e-73	265.00
IUUC-Itr-048331	Ictidomys tridecemlineatus	96.97	4.00e-73	266.00
IUUC-Lch-050068	Latimeria chalumnae	82.95	4.00e-61	226.00
IUUC-Mcc-054809	Macaca mulatta	96.21	2.00e-72	263.00
IUUC-Mmu-063172	Mus musculus	97.56	3.00e-68	249.00
IUUC-Mac-065187	Musa acuminata	36.26	3.00e-09	55.10
IUUC-Oga-089042	Otolemur garnettii	97.73	1.00e-73	268.00
IUUC-Oar-089400	Ovis aries	96.97	5.00e-73	265.00
IUUC-Ptr-091264	Pan troglodytes	96.97	6.00e-73	265.00
IUUC-Pan-092931	Papio anubis	96.21	2.00e-72	263.00
IUUC-Pfo-097322	Poecilia formosa	75.76	3.00e-59	220.00
IUUC-Pab-098273	Pongo abelii	96.97	6.00e-73	265.00
IUUC-Rno-105525	Rattus norvegicus	97.56	3.00e-68	249.00
IUUC-Ssl-108605	Sclerotinia sclerotiorum	45.16	7.00e-03	34.30
IUUC-Sly-110960	Solanum lycopersicum	33.33	1.00e-10	59.70
IUUC-Stu-112094	Solanum tuberosum	29.13	2.00e-08	52.40
IUUC-Ssc-115263	Sus scrofa	94.31	3.00e-66	243.00
IUUC-Tru-117994	Takifugu rubripes	75.00	4.00e-58	216.00
IUUC-Tni-120742	Tetraodon nigroviridis	76.52	6.00e-60	222.00
IUUC-Xtr-132218	Xenopus tropicalis	82.58	2.00e-64	237.00
IUUC-Xma-133570	Xiphophorus maculatus	75.00	7.00e-59	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence