iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087387

Ensembl Protein ID

ENSORLP00000017853.1

UniProt Accession

H2MGV9; H2MGV9_ORYLA

Genbank Protein ID

ENSORLP00000017853

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04010981

Gene Name

wdr13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000014232.1	ENSORLT00000017854.1	ENSORLP00000017853.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-21	73.9	212	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++vt++a+  s++++vs s Dgt+++W++ +g++++
   Q: 212  GHGGPVTDFAWslSNDIIVSTSLDGTLRIWNTEDGRCIR 250
           8***********987**********************87 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAAVWQQVLA VDARYNAYRT PTFPQFRTQY IRRRSQLLRE NAKCGFEPGL RRHYLKLRSQ 60
LLALRYGPLS EQSSFRASSV RSSRTTLDRM EDFEEDPRAQ GARGHRRSVG RGSYQVQAQM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGATGGAGA AAAGCTAAGG AAGGTAAGGT TTTTTTGAAC GTTTTCTTTG CCGTTTCGTC 60
GGTTTGTCAC TCCATTTTGT GCATAGTAAA CATAGCATAA ATGTAGTAAA TAATAGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	34.72	7.00e-27	114.00
IUUC-Aml-001761	Ailuropoda melanoleuca	80.41	0.00e+00	726.00
IUUC-Atr-002577	Amborella trichopoda	38.91	6.00e-57	215.00
IUUC-Aca-004423	Anolis carolinensis	84.54	0.00e+00	808.00
IUUC-Aly-005453	Arabidopsis lyrata	36.89	3.00e-52	199.00
IUUC-Ath-007256	Arabidopsis thaliana	36.59	1.00e-51	197.00
IUUC-Ame-010600	Astyanax mexicanus	92.32	0.00e+00	781.00
IUUC-Bta-013511	Bos taurus	80.41	0.00e+00	726.00
IUUC-Bdi-014322	Brachypodium distachyon	38.18	3.00e-53	202.00
IUUC-Bol-015992	Brassica oleracea	37.50	2.00e-54	206.00
IUUC-Bra-017399	Brassica rapa	36.90	3.00e-54	205.00
IUUC-Cja-019508	Callithrix jacchus	80.62	0.00e+00	727.00
IUUC-Cfa-020273	Canis familiaris	80.62	0.00e+00	727.00
IUUC-Cpo-022002	Cavia porcellus	79.79	0.00e+00	725.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	23.32	2.00e-09	57.40
IUUC-Csa-023862	Chlorocebus sabaeus	80.29	0.00e+00	720.00
IUUC-Cin-025687	Ciona intestinalis	56.70	3.00e-156	544.00
IUUC-Csv-025992	Ciona savignyi	56.79	7.00e-157	546.00
IUUC-Dre-028697	Danio rerio	93.36	0.00e+00	796.00
IUUC-Dno-029208	Dasypus novemcinctus	80.41	0.00e+00	726.00
IUUC-Dor-030316	Dipodomys ordii	84.13	3.00e-94	338.00
IUUC-Eca-033362	Equus caballus	80.19	9.00e-179	619.00
IUUC-Eeu-034599	Erinaceus europaeus	66.45	1.00e-103	370.00
IUUC-Fca-035874	Felis catus	80.62	0.00e+00	728.00
IUUC-Gmo-039176	Gadus morhua	94.62	0.00e+00	818.00
IUUC-Gga-040458	Gallus gallus	67.94	2.00e-52	197.00
IUUC-Gac-041802	Gasterosteus aculeatus	93.15	0.00e+00	830.00
IUUC-Gma-043284	Glycine max	37.58	4.00e-52	198.00
IUUC-Ggo-045546	Gorilla gorilla	80.62	0.00e+00	729.00
IUUC-Hsa-046407	Homo sapiens	80.62	0.00e+00	729.00
IUUC-Hvu-047726	Hordeum vulgare	36.80	3.00e-48	185.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	80.41	0.00e+00	726.00
IUUC-Lpe-051374	Leersia perrieri	38.91	1.00e-53	204.00
IUUC-Loc-052403	Lepisosteus oculatus	84.02	0.00e+00	743.00
IUUC-Laf-053721	Loxodonta africana	80.21	0.00e+00	726.00
IUUC-Mcc-055449	Macaca mulatta	80.29	0.00e+00	721.00
IUUC-Meu-056487	Macropus eugenii	81.24	0.00e+00	778.00
IUUC-Mtr-058659	Medicago truncatula	33.06	2.00e-46	179.00
IUUC-Mmr-061406	Microcebus murinus	79.39	3.00e-176	610.00
IUUC-Mdo-062331	Monodelphis domestica	81.14	0.00e+00	743.00
IUUC-Mmu-064001	Mus musculus	80.41	0.00e+00	726.00
IUUC-Mac-064934	Musa acuminata	37.39	4.00e-51	195.00
IUUC-Mpu-065871	Mustela putorius furo	80.21	0.00e+00	726.00
IUUC-Mlu-067463	Myotis lucifugus	80.29	0.00e+00	722.00
IUUC-Nle-070136	Nomascus leucogenys	80.29	0.00e+00	720.00
IUUC-Opr-070913	Ochotona princeps	73.40	0.00e+00	632.00
IUUC-Ont-071347	Oreochromis niloticus	95.23	0.00e+00	885.00
IUUC-Oan-073527	Ornithorhynchus anatinus	75.51	4.00e-161	560.00
IUUC-Ocu-074829	Oryctolagus cuniculus	76.43	0.00e+00	675.00
IUUC-Oba-075666	Oryza barthii	38.60	1.00e-52	200.00
IUUC-Obr-076413	Oryza brachyantha	38.86	4.00e-53	202.00
IUUC-Ogl-076998	Oryza glaberrima	38.60	8.00e-53	201.00
IUUC-Ogu-078287	Oryza glumaepatula	38.91	2.00e-53	202.00
IUUC-Oin-079359	Oryza indica	38.60	1.00e-52	200.00
IUUC-Olo-080438	Oryza longistaminata	35.06	6.00e-26	111.00
IUUC-Ome-081328	Oryza meridionalis	38.91	8.00e-57	214.00
IUUC-Oni-082574	Oryza nivara	38.60	1.00e-52	200.00
IUUC-Opu-083376	Oryza punctata	36.00	2.00e-47	183.00
IUUC-Oru-085162	Oryza rufipogon	38.60	1.00e-52	200.00
IUUC-Osa-085507	Oryza sativa	38.60	1.00e-52	200.00
IUUC-Oga-088694	Otolemur garnettii	80.41	0.00e+00	726.00
IUUC-Oar-090355	Ovis aries	79.18	0.00e+00	707.00
IUUC-Ptr-091488	Pan troglodytes	77.17	1.00e-148	519.00
IUUC-Pan-092516	Papio anubis	80.29	0.00e+00	720.00
IUUC-Pma-094572	Petromyzon marinus	74.33	0.00e+00	722.00
IUUC-Ppa-096003	Physcomitrella patens	35.12	4.00e-39	155.00
IUUC-Pfo-096819	Poecilia formosa	89.75	0.00e+00	823.00
IUUC-Pab-098373	Pongo abelii	77.18	0.00e+00	704.00
IUUC-Pop-099930	Populus trichocarpa	39.04	4.00e-55	208.00
IUUC-Pca-100248	Procavia capensis	79.18	0.00e+00	706.00
IUUC-Ppe-101592	Prunus persica	37.27	7.00e-51	194.00
IUUC-Pva-102971	Pteropus vampyrus	80.00	0.00e+00	725.00
IUUC-Rno-105386	Rattus norvegicus	78.88	4.00e-175	607.00
IUUC-Sha-106520	Sarcophilus harrisii	79.38	0.00e+00	766.00
IUUC-Smo-108859	Selaginella moellendorffii	40.30	5.00e-60	224.00
IUUC-Sit-109987	Setaria italica	38.86	5.00e-53	201.00
IUUC-Sly-111433	Solanum lycopersicum	35.69	2.00e-52	198.00
IUUC-Stu-112677	Solanum tuberosum	36.06	1.00e-54	207.00
IUUC-Sar-113317	Sorex araneus	75.45	1.00e-112	400.00
IUUC-Sbi-114115	Sorghum bicolor	38.10	2.00e-21	96.30
IUUC-Ssc-115697	Sus scrofa	77.65	3.00e-106	377.00
IUUC-Tru-118749	Takifugu rubripes	93.39	0.00e+00	832.00
IUUC-Tni-119685	Tetraodon nigroviridis	90.14	0.00e+00	783.00
IUUC-Tca-121769	Theobroma cacao	37.76	6.00e-53	201.00
IUUC-Tae-125563	Triticum aestivum	36.07	2.00e-36	145.00
IUUC-Tur-126403	Triticum urartu	34.72	6.00e-26	111.00
IUUC-Tbe-127245	Tupaia belangeri	83.13	3.00e-107	382.00
IUUC-Ttr-128854	Tursiops truncatus	80.41	0.00e+00	749.00
IUUC-Vvi-131113	Vitis vinifera	36.97	3.00e-52	199.00
IUUC-Xtr-132420	Xenopus tropicalis	79.45	0.00e+00	679.00
IUUC-Xma-134302	Xiphophorus maculatus	94.19	0.00e+00	878.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence