• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105046
Ensembl Protein ID ENSRNOP00000027121.6
UniProt Accession D3ZMM2; D3ZMM2_RAT
Genbank Protein ID ENSRNOP00000027121
Protein Name WD repeat domain 90
Genbank Nucleotide ID AABR07029217
Gene Name Wdr90
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000020006.6 ENSRNOT00000027121.6 ENSRNOP00000027121.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-35 120.5 1576 1608
UBD/Beta-Prp 4.40e-87 292.4 1443 1748
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH  +v+ + f ++  + ++++ Dg+++vW+l 
   Q: 1576 GHRTKVNEVVFsPSeSHCATCGEDGSVRVWSLA 1608
           7888999999996669**************986 PP
   

   UBD/Beta-Prp
   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dls........tg 84
            +t++++   ++ll  gs +g + vwd+ tg ++   + +++e+  + +s +   lv+gs+ r +++w      +          ++
   Q: 1443 ELTSLCY-GASPLLYCGSSSGQVCVWDTGTGHCFLAWEADDGEIGVLLCSGS--RLVSGSNTRRLRLWavgvvpE-LrrkgssarSS 1525
           5677777.88999*************************************99..7*************6666552.05666665577 PP
   S: 85   kcvhtlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + ++  +   +  v+s sf+   d  v+G+   ti   ++ +g+  + + sgh+  vn vv++p+++ +++++ D+ vr+W+l++++
   Q: 1526 SVFMERElTLDGAVVSASFDSGMDMGVVGTTAGTIWYVNWTEGTSTR-LISGHRTKVNEVVFSPSESHCATCGEDGSVRVWSLASME 1611
           77777767789999999999977**************9999999999.99************************************* PP
   S: 171  llrtltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
           l+ +++   ++s  ++++++++      +++v+g  dgt+++++++++    +++ h++  + ++fs +++ ++sg +Dg + +   
   Q: 1612 LVIQFQV-LNQSCLCVAWTPQScglpeqQQVVAGYSDGTLRVFSISRTALELKMHPHRSALTAIAFSTDGQTILSGDKDGLVAVSHP 1697
           *****98.************99**************************************************************999 PP
   S: 252  rsgdllktlqlhn.ssvisvav.......lsfgdnvl.vlgsedskvniwk 293
            +g + ++l+ h+   +++++        l++++ +l +++s+d++v iw+
   Q: 1698 CTGMTFRVLSDHRgAPISAIQStskeygdLGVEGVELwLAASADQRVSIWA 1748
           ************9844555555334445666666555455555*******8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAGGSGARVR RVSRPGSPGS EVPAASVTRP HVEARSAGGG GGSRRAAQDR CSGGVPSAAW 60
QHPFLNVFRH FRMDEWKRSS KEGDVAVVTD KVLKSAVYRI RGSVSASNYI QLPRTSTQSL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105046|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCGGGAG GTAGCGGCGC GCGCGTCCGT CGGGTCTCGC GCCCCGGGAG TCCCGGGTCC 60
GAGGTCCCCG CTGCGTCAGT GACTAGACCT CATGTAGAAG CCCGTTCCGC GGGCGGAGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105046|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007714--CFA20/WDR90/C3orf67
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF05018--DUF667
PF00400--WD40
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001801 Ailuropoda melanoleuca 68.70 0.00e+00 2421.00
IUUC-Apl-003387 Anas platyrhynchos 56.89 0.00e+00 1811.00
IUUC-Aca-005235 Anolis carolinensis 52.81 0.00e+00 1664.00
IUUC-Ame-011595 Astyanax mexicanus 47.07 0.00e+00 1665.00
IUUC-Bta-012328 Bos taurus 67.79 0.00e+00 2316.00
IUUC-Cja-019058 Callithrix jacchus 68.00 0.00e+00 1214.00
IUUC-Cfa-020934 Canis familiaris 66.90 0.00e+00 2271.00
IUUC-Cpo-022025 Cavia porcellus 70.84 0.00e+00 2514.00
IUUC-Cre-022928 Chlamydomonas reinhardtii 31.68 3.00e-61 231.00
IUUC-Csa-023022 Chlorocebus sabaeus 69.69 0.00e+00 2382.00
IUUC-Cin-025133 Ciona intestinalis 35.68 0.00e+00 1170.00
IUUC-Csv-025816 Ciona savignyi 35.47 0.00e+00 1074.00
IUUC-Dre-028823 Danio rerio 48.25 0.00e+00 944.00
IUUC-Dno-029211 Dasypus novemcinctus 69.55 0.00e+00 939.00
IUUC-Dor-030211 Dipodomys ordii 73.91 0.00e+00 1503.00
IUUC-Ete-032363 Echinops telfairi 56.24 0.00e+00 889.00
IUUC-Eca-034296 Equus caballus 69.37 0.00e+00 2348.00
IUUC-Eeu-035226 Erinaceus europaeus 53.07 0.00e+00 800.00
IUUC-Fca-035384 Felis catus 69.99 0.00e+00 2463.00
IUUC-Fal-037660 Ficedula albicollis 55.09 0.00e+00 1812.00
IUUC-Gga-040666 Gallus gallus 57.19 0.00e+00 1355.00
IUUC-Gac-041358 Gasterosteus aculeatus 47.59 0.00e+00 1595.00
IUUC-Ggo-045121 Gorilla gorilla 68.25 0.00e+00 2361.00
IUUC-Hsa-046289 Homo sapiens 68.90 0.00e+00 2325.00
IUUC-Itr-048485 Ictidomys tridecemlineatus 72.32 0.00e+00 2444.00
IUUC-Lch-050009 Latimeria chalumnae 49.18 0.00e+00 1699.00
IUUC-Loc-052629 Lepisosteus oculatus 45.58 0.00e+00 838.00
IUUC-Mcc-055834 Macaca mulatta 64.60 0.00e+00 1272.00
IUUC-Meu-056162 Macropus eugenii 60.86 0.00e+00 819.00
IUUC-Mga-060167 Meleagris gallopavo 55.17 0.00e+00 1696.00
IUUC-Mmr-060761 Microcebus murinus 79.02 6.00e-145 506.00
IUUC-Mdo-061886 Monodelphis domestica 57.67 0.00e+00 2174.00
IUUC-Mmu-063652 Mus musculus 89.97 0.00e+00 3358.00
IUUC-Mlu-068141 Myotis lucifugus 68.71 0.00e+00 2395.00
IUUC-Nle-069133 Nomascus leucogenys 63.83 0.00e+00 1486.00
IUUC-Ont-072496 Oreochromis niloticus 47.95 0.00e+00 1714.00
IUUC-Oan-072833 Ornithorhynchus anatinus 53.52 0.00e+00 1739.00
IUUC-Ola-086564 Oryzias latipes 47.00 0.00e+00 1636.00
IUUC-Oga-088919 Otolemur garnettii 64.63 0.00e+00 2239.00
IUUC-Oar-089946 Ovis aries 64.55 0.00e+00 1165.00
IUUC-Ptr-090755 Pan troglodytes 68.70 0.00e+00 1960.00
IUUC-Pan-092054 Papio anubis 69.02 0.00e+00 2382.00
IUUC-Psi-093467 Pelodiscus sinensis 57.47 0.00e+00 2033.00
IUUC-Pma-094553 Petromyzon marinus 45.69 0.00e+00 1423.00
IUUC-Pfo-096849 Poecilia formosa 46.19 0.00e+00 1513.00
IUUC-Pab-098320 Pongo abelii 67.85 0.00e+00 2092.00
IUUC-Pca-100172 Procavia capensis 59.61 0.00e+00 1171.00
IUUC-Pva-102772 Pteropus vampyrus 66.98 0.00e+00 1310.00
IUUC-Sha-107094 Sarcophilus harrisii 58.16 0.00e+00 2198.00
IUUC-Ssc-116257 Sus scrofa 65.08 0.00e+00 2180.00
IUUC-Tgu-117323 Taeniopygia guttata 54.10 0.00e+00 1528.00
IUUC-Tru-118717 Takifugu rubripes 46.47 0.00e+00 1552.00
IUUC-Tni-120108 Tetraodon nigroviridis 44.71 0.00e+00 910.00
IUUC-Ttr-128378 Tursiops truncatus 64.77 0.00e+00 1536.00
IUUC-Xtr-131760 Xenopus tropicalis 49.92 0.00e+00 1732.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved