iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012286

Ensembl Protein ID

CCU76771

UniProt Accession

N1J9D6; N1J9D6_BLUG1

Genbank Protein ID

CCU76771.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CAUH01003023

Gene Name

ERB1; BGHDH14_bgh03068

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh03068	CCU76771	CCU76771

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-12	45.7	413	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtgvl 35
           gH+++v++l+  ++++ l++G+dDgt+++W+l tg++
   Q: 413  GHKGRVRSLEIdPSGIwLATGGDDGTVRIWELLTGRQ 449
           8**********9553348**************99987 PP

Organism

Blumeria graminis

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MATTKNSKKR NSVTKDVIVT SDSESEPEFV GDLLDGVFSE SEDDNSENDE TRDESDSDES 60
SHSNDLGTDQ DNKDNKVKKT IISRKQLTSD TNYDDNNEDR PNYSVIEDAN GGERYVYDEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCA CAAAGAACTC GAAAAAACGC AATTCTGTGA CAAAGGATGT GATAGTTACC 60
TCAGATTCCG AATCTGAACC CGAGTTTGTT GGCGACTTAC TCGATGGTGT CTTTTCGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.90	2.00e-117	414.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.73	3.00e-137	480.00
IUUC-Atr-003141	Amborella trichopoda	39.91	1.00e-80	291.00
IUUC-Apl-003545	Anas platyrhynchos	41.74	8.00e-127	445.00
IUUC-Aly-005649	Arabidopsis lyrata	42.83	2.00e-144	504.00
IUUC-Ath-007625	Arabidopsis thaliana	43.62	4.00e-138	483.00
IUUC-Ago-007958	Ashbya gossypii	54.53	0.00e+00	775.00
IUUC-Acl-008344	Aspergillus clavatus	68.93	0.00e+00	925.00
IUUC-Afl-008616	Aspergillus flavus	61.90	0.00e+00	951.00
IUUC-Afu-009083	Aspergillus fumigatus	61.89	0.00e+00	899.00
IUUC-Ani-009365	Aspergillus nidulans	68.64	0.00e+00	933.00
IUUC-Ang-009796	Aspergillus niger	66.38	0.00e+00	926.00
IUUC-Aor-010015	Aspergillus oryzae	61.90	0.00e+00	951.00
IUUC-Ate-010537	Aspergillus terreus	61.99	0.00e+00	959.00
IUUC-Ame-011767	Astyanax mexicanus	51.46	2.00e-70	256.00
IUUC-Bta-013569	Bos taurus	43.02	6.00e-148	516.00
IUUC-Bci-013820	Botrytis cinerea	72.62	0.00e+00	1072.00
IUUC-Bdi-014477	Brachypodium distachyon	43.04	5.00e-144	503.00
IUUC-Bol-016099	Brassica oleracea	42.27	3.00e-142	497.00
IUUC-Bra-017174	Brassica rapa	42.27	4.00e-143	500.00
IUUC-Cel-018201	Caenorhabditis elegans	39.18	1.00e-117	415.00
IUUC-Cja-019009	Callithrix jacchus	37.54	3.00e-125	440.00
IUUC-Cfa-020173	Canis familiaris	39.58	3.00e-136	476.00
IUUC-Cpo-021796	Cavia porcellus	43.29	2.00e-147	514.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.81	4.00e-130	456.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.17	2.00e-155	540.00
IUUC-Cin-025782	Ciona intestinalis	42.75	9.00e-156	541.00
IUUC-Csv-026352	Ciona savignyi	41.50	1.00e-148	518.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	65.22	0.00e+00	820.00
IUUC-Cne-027004	Cryptococcus neoformans	49.62	0.00e+00	657.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.20	7.00e-111	392.00
IUUC-Dre-028658	Danio rerio	44.79	5.00e-160	556.00
IUUC-Dno-028883	Dasypus novemcinctus	43.33	6.00e-150	522.00
IUUC-Dor-031031	Dipodomys ordii	42.37	2.00e-151	527.00
IUUC-Dse-031443	Dothistroma septosporum	60.52	0.00e+00	824.00
IUUC-Dme-031786	Drosophila melanogaster	41.36	6.00e-153	532.00
IUUC-Eca-033677	Equus caballus	43.17	3.00e-149	520.00
IUUC-Eeu-035310	Erinaceus europaeus	40.19	1.00e-114	404.00
IUUC-Fca-035888	Felis catus	42.77	5.00e-151	525.00
IUUC-Fal-037438	Ficedula albicollis	44.77	6.00e-127	446.00
IUUC-Fox-037973	Fusarium oxysporum	71.09	0.00e+00	1009.00
IUUC-Fso-038187	Fusarium solani	71.98	0.00e+00	1022.00
IUUC-Gmo-039114	Gadus morhua	42.72	1.00e-143	501.00
IUUC-Ggr-039746	Gaeumannomyces graminis	65.45	0.00e+00	1041.00
IUUC-Gga-040631	Gallus gallus	43.75	8.00e-87	311.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.70	2.00e-151	527.00
IUUC-Gma-044215	Glycine max	44.48	2.00e-148	517.00
IUUC-Ggo-045587	Gorilla gorilla	43.33	2.00e-155	540.00
IUUC-Hsa-046319	Homo sapiens	43.33	1.00e-155	541.00
IUUC-Hvu-047526	Hordeum vulgare	42.50	1.00e-138	484.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.81	1.00e-147	515.00
IUUC-Kpa-049221	Komagataella pastoris	49.63	0.00e+00	696.00
IUUC-Lch-049640	Latimeria chalumnae	44.24	4.00e-164	569.00
IUUC-Lpe-051135	Leersia perrieri	40.28	1.00e-124	438.00
IUUC-Loc-051930	Lepisosteus oculatus	46.20	2.00e-166	577.00
IUUC-Lma-053290	Leptosphaeria maculans	67.85	0.00e+00	959.00
IUUC-Laf-053903	Loxodonta africana	39.75	1.00e-127	448.00
IUUC-Mcc-055471	Macaca mulatta	43.02	1.00e-155	541.00
IUUC-Meu-056190	Macropus eugenii	43.92	2.00e-150	524.00
IUUC-Mor-057135	Magnaporthe oryzae	65.86	0.00e+00	997.00
IUUC-Mpo-057475	Magnaporthe poae	70.75	0.00e+00	984.00
IUUC-Mtr-058689	Medicago truncatula	40.50	6.00e-132	462.00
IUUC-Mla-059149	Melampsora laricipopulina	51.05	0.00e+00	651.00
IUUC-Mga-059645	Meleagris gallopavo	39.84	4.00e-51	192.00
IUUC-Mvi-060485	Microbotryum violaceum	47.13	2.00e-161	562.00
IUUC-Mmr-061674	Microcebus murinus	43.49	6.00e-150	522.00
IUUC-Mdo-062973	Monodelphis domestica	43.92	8.00e-158	548.00
IUUC-Mmu-064180	Mus musculus	42.65	1.00e-150	524.00
IUUC-Mac-064535	Musa acuminata	40.14	2.00e-88	318.00
IUUC-Mpu-066406	Mustela putorius furo	44.18	1.00e-154	538.00
IUUC-Mlu-067795	Myotis lucifugus	43.44	9.00e-142	495.00
IUUC-Nfi-068516	Neosartorya fischeri	62.28	0.00e+00	865.00
IUUC-Ncr-068767	Neurospora crassa	71.32	0.00e+00	938.00
IUUC-Opr-071084	Ochotona princeps	39.19	4.00e-58	216.00
IUUC-Ont-071614	Oreochromis niloticus	44.76	7.00e-162	562.00
IUUC-Oba-075980	Oryza barthii	38.86	8.00e-123	432.00
IUUC-Obr-076799	Oryza brachyantha	42.18	8.00e-141	492.00
IUUC-Ogl-077134	Oryza glaberrima	42.59	1.00e-135	475.00
IUUC-Ogu-078655	Oryza glumaepatula	40.69	3.00e-127	447.00
IUUC-Oin-079654	Oryza indica	42.59	2.00e-135	474.00
IUUC-Olo-080706	Oryza longistaminata	39.34	6.00e-124	436.00
IUUC-Ome-081716	Oryza meridionalis	38.96	4.00e-72	264.00
IUUC-Oni-082508	Oryza nivara	40.54	4.00e-122	430.00
IUUC-Opu-083707	Oryza punctata	39.18	2.00e-122	431.00
IUUC-Oru-084453	Oryza rufipogon	39.34	6.00e-124	436.00
IUUC-Osa-085811	Oryza sativa	42.43	2.00e-135	474.00
IUUC-Ola-087361	Oryzias latipes	45.17	4.00e-162	563.00
IUUC-Oga-088015	Otolemur garnettii	42.70	7.00e-155	538.00
IUUC-Oar-090058	Ovis aries	52.10	2.00e-49	187.00
IUUC-Ptr-090631	Pan troglodytes	43.48	1.00e-61	228.00
IUUC-Pan-092306	Papio anubis	43.11	3.00e-154	536.00
IUUC-Pma-094622	Petromyzon marinus	44.06	9.00e-161	558.00
IUUC-Pno-094794	Phaeosphaeria nodorum	64.56	0.00e+00	914.00
IUUC-Ppa-095528	Physcomitrella patens	40.23	7.00e-86	309.00
IUUC-Pfo-096682	Poecilia formosa	44.17	2.00e-165	573.00
IUUC-Pab-097939	Pongo abelii	43.33	3.00e-140	490.00
IUUC-Pop-099043	Populus trichocarpa	43.52	2.00e-134	470.00
IUUC-Pca-100333	Procavia capensis	43.13	2.00e-148	517.00
IUUC-Ppe-102078	Prunus persica	43.26	8.00e-138	482.00
IUUC-Pgr-103525	Puccinia graminis	49.42	3.00e-176	610.00
IUUC-Ptt-103929	Puccinia triticina	49.26	3.00e-170	590.00
IUUC-Pte-104029	Pyrenophora teres	69.13	0.00e+00	1002.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	68.66	0.00e+00	1005.00
IUUC-Rno-105248	Rattus norvegicus	43.17	3.00e-151	526.00
IUUC-Sce-106381	Saccharomyces cerevisiae	54.41	0.00e+00	759.00
IUUC-Sha-106519	Sarcophilus harrisii	44.71	4.00e-158	549.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	46.02	9.00e-167	578.00
IUUC-Spo-108071	Schizosaccharomyces pombe	46.53	1.00e-163	568.00
IUUC-Smo-109604	Selaginella moellendorffii	43.12	1.00e-129	454.00
IUUC-Sit-110551	Setaria italica	43.44	3.00e-140	489.00
IUUC-Sly-110970	Solanum lycopersicum	43.80	4.00e-74	270.00
IUUC-Stu-112593	Solanum tuberosum	43.83	8.00e-146	509.00
IUUC-Sar-113123	Sorex araneus	42.86	5.00e-64	235.00
IUUC-Sbi-113945	Sorghum bicolor	43.29	8.00e-142	495.00
IUUC-Sre-115188	Sporisorium reilianum	46.35	6.00e-171	592.00
IUUC-Ssc-115352	Sus scrofa	42.70	4.00e-152	529.00
IUUC-Tru-117685	Takifugu rubripes	44.91	5.00e-166	575.00
IUUC-Tni-119982	Tetraodon nigroviridis	45.40	3.00e-159	553.00
IUUC-Tca-121664	Theobroma cacao	42.75	8.00e-145	505.00
IUUC-Tre-122229	Trichoderma reesei	69.54	0.00e+00	887.00
IUUC-Tvi-122576	Trichoderma virens	70.12	0.00e+00	905.00
IUUC-Tae-124110	Triticum aestivum	42.79	3.00e-132	463.00
IUUC-Tur-126781	Triticum urartu	39.74	1.00e-113	402.00
IUUC-Tme-127080	Tuber melanosporum	67.70	0.00e+00	936.00
IUUC-Ttr-128514	Tursiops truncatus	39.12	8.00e-93	332.00
IUUC-Uma-129556	Ustilago maydis	45.91	3.00e-167	580.00
IUUC-Vda-129715	Verticillium dahliae	71.68	0.00e+00	994.00
IUUC-Vvi-131211	Vitis vinifera	42.17	6.00e-135	472.00
IUUC-Xma-133883	Xiphophorus maculatus	44.24	3.00e-159	553.00
IUUC-Yli-134438	Yarrowia lipolytica	51.51	0.00e+00	701.00
IUUC-Zma-135341	Zea mays	38.78	1.00e-130	458.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence