iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051135

Ensembl Protein ID

LPERR07G10350.1

UniProt Accession

A0A0D9WY85; A0A0D9WY85_9ORYZ

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR07G10350	LPERR07G10350.1	LPERR07G10350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-12	46.5	348	386

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+  s+   ++sGs Dgti+vW++ tg+++k
   Q: 348  GHNGPVKSLSVeSTgQWIASGSSDGTIRVWEVETGRCIK 386
           8***********77799********************86 PP

Organism

Leersia perrieri

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGNSDGDRHN DDLSAEDSPW SEGSWSDDDD DEGSLSFEDS GDSGEGSDVE SDEPDAAAAE 60
ESDSSEDEVA PRNTVGDVPL EWYKNEEHIG YDIAGSKIKK RDREGRIEAY LKNADDAKNW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAATA GCGACGGAGA CCGCCACAAC GACGACCTCT CCGCCGAAGA TTCTCCGTGG 60
AGCGAGGGTA GCTGGTCAGA CGACGACGAC GACGAGGTGC GTCCCTCCCT CCTCCTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	84.10	0.00e+00	957.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.13	1.00e-123	436.00
IUUC-Atr-003141	Amborella trichopoda	64.59	2.00e-152	531.00
IUUC-Apl-003545	Anas platyrhynchos	41.37	9.00e-120	423.00
IUUC-Aly-005649	Arabidopsis lyrata	61.70	0.00e+00	786.00
IUUC-Ath-007625	Arabidopsis thaliana	58.81	0.00e+00	766.00
IUUC-Ago-007958	Ashbya gossypii	37.86	9.00e-127	447.00
IUUC-Acl-008344	Aspergillus clavatus	39.52	4.00e-113	401.00
IUUC-Afl-008616	Aspergillus flavus	41.19	7.00e-69	254.00
IUUC-Afu-009083	Aspergillus fumigatus	43.56	2.00e-62	233.00
IUUC-Ani-009365	Aspergillus nidulans	38.27	9.00e-114	404.00
IUUC-Ang-009796	Aspergillus niger	38.39	7.00e-109	387.00
IUUC-Aor-010015	Aspergillus oryzae	41.19	7.00e-69	254.00
IUUC-Ate-010537	Aspergillus terreus	37.87	7.00e-114	404.00
IUUC-Ame-011767	Astyanax mexicanus	52.38	5.00e-59	220.00
IUUC-Bgr-012286	Blumeria graminis	38.83	5.00e-128	451.00
IUUC-Bta-013569	Bos taurus	42.39	4.00e-137	481.00
IUUC-Bci-013820	Botrytis cinerea	39.03	2.00e-117	416.00
IUUC-Bdi-014477	Brachypodium distachyon	83.90	0.00e+00	1048.00
IUUC-Bol-016099	Brassica oleracea	63.58	0.00e+00	816.00
IUUC-Bra-017174	Brassica rapa	63.64	0.00e+00	824.00
IUUC-Cel-018201	Caenorhabditis elegans	38.34	1.00e-115	409.00
IUUC-Cja-019009	Callithrix jacchus	39.74	2.00e-127	449.00
IUUC-Cfa-020173	Canis familiaris	40.03	3.00e-129	455.00
IUUC-Cpo-021796	Cavia porcellus	42.86	2.00e-137	482.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	47.26	1.00e-158	553.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.33	1.00e-140	493.00
IUUC-Cin-025782	Ciona intestinalis	40.25	9.00e-132	463.00
IUUC-Csv-026352	Ciona savignyi	41.97	3.00e-144	504.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	37.10	1.00e-102	367.00
IUUC-Cne-027004	Cryptococcus neoformans	41.58	3.00e-142	498.00
IUUC-Cme-027242	Cyanidioschyzon merolae	33.43	2.00e-100	358.00
IUUC-Dre-028658	Danio rerio	43.30	2.00e-150	525.00
IUUC-Dno-028883	Dasypus novemcinctus	43.20	3.00e-140	491.00
IUUC-Dor-031031	Dipodomys ordii	40.80	4.00e-140	491.00
IUUC-Dse-031443	Dothistroma septosporum	37.59	2.00e-112	399.00
IUUC-Dme-031786	Drosophila melanogaster	40.43	3.00e-139	488.00
IUUC-Eca-033677	Equus caballus	43.04	8.00e-138	483.00
IUUC-Eeu-035310	Erinaceus europaeus	38.92	4.00e-102	364.00
IUUC-Fca-035888	Felis catus	41.03	4.00e-132	464.00
IUUC-Fal-037438	Ficedula albicollis	43.93	1.00e-122	432.00
IUUC-Fox-037973	Fusarium oxysporum	40.00	1.00e-130	459.00
IUUC-Fso-038187	Fusarium solani	38.59	4.00e-129	454.00
IUUC-Gmo-039114	Gadus morhua	40.19	7.00e-128	450.00
IUUC-Ggr-039746	Gaeumannomyces graminis	37.93	1.00e-133	470.00
IUUC-Gga-040631	Gallus gallus	45.75	4.00e-83	300.00
IUUC-Gac-042582	Gasterosteus aculeatus	41.40	2.00e-133	469.00
IUUC-Gma-044215	Glycine max	60.71	0.00e+00	795.00
IUUC-Ggo-045587	Gorilla gorilla	42.39	2.00e-140	492.00
IUUC-Hsa-046319	Homo sapiens	42.39	1.00e-140	493.00
IUUC-Hvu-047526	Hordeum vulgare	77.51	0.00e+00	1014.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.16	4.00e-138	484.00
IUUC-Kpa-049221	Komagataella pastoris	40.16	4.00e-72	265.00
IUUC-Lch-049640	Latimeria chalumnae	43.74	1.00e-153	536.00
IUUC-Loc-051930	Lepisosteus oculatus	44.30	3.00e-153	534.00
IUUC-Lma-053290	Leptosphaeria maculans	39.45	2.00e-115	409.00
IUUC-Laf-053903	Loxodonta africana	43.55	8.00e-82	297.00
IUUC-Mcc-055471	Macaca mulatta	40.24	5.00e-142	497.00
IUUC-Meu-056190	Macropus eugenii	43.46	1.00e-139	489.00
IUUC-Mor-057135	Magnaporthe oryzae	39.23	1.00e-124	440.00
IUUC-Mpo-057475	Magnaporthe poae	36.93	3.00e-123	435.00
IUUC-Mtr-058689	Medicago truncatula	62.41	6.00e-144	504.00
IUUC-Mla-059149	Melampsora laricipopulina	41.35	3.00e-135	475.00
IUUC-Mga-059645	Meleagris gallopavo	39.92	1.00e-45	175.00
IUUC-Mvi-060485	Microbotryum violaceum	40.18	9.00e-120	424.00
IUUC-Mmr-061674	Microcebus murinus	42.28	4.00e-136	477.00
IUUC-Mdo-062973	Monodelphis domestica	42.54	4.00e-144	504.00
IUUC-Mmu-064180	Mus musculus	40.27	6.00e-139	487.00
IUUC-Mac-064535	Musa acuminata	68.01	0.00e+00	627.00
IUUC-Mpu-066406	Mustela putorius furo	41.52	7.00e-142	497.00
IUUC-Mlu-067795	Myotis lucifugus	40.85	3.00e-130	458.00
IUUC-Nfi-068516	Neosartorya fischeri	43.56	2.00e-56	213.00
IUUC-Ncr-068767	Neurospora crassa	38.27	2.00e-116	412.00
IUUC-Opr-071084	Ochotona princeps	45.58	2.00e-63	235.00
IUUC-Ont-071614	Oreochromis niloticus	40.68	3.00e-143	501.00
IUUC-Oba-075980	Oryza barthii	94.18	0.00e+00	1108.00
IUUC-Obr-076799	Oryza brachyantha	87.70	0.00e+00	1140.00
IUUC-Ogl-077134	Oryza glaberrima	89.17	0.00e+00	1109.00
IUUC-Ogu-078655	Oryza glumaepatula	91.35	0.00e+00	1102.00
IUUC-Oin-079654	Oryza indica	90.36	0.00e+00	1088.00
IUUC-Olo-080706	Oryza longistaminata	94.49	0.00e+00	1115.00
IUUC-Ome-081716	Oryza meridionalis	88.00	0.00e+00	1031.00
IUUC-Oni-082508	Oryza nivara	86.69	0.00e+00	1060.00
IUUC-Opu-083707	Oryza punctata	94.03	0.00e+00	1089.00
IUUC-Oru-084453	Oryza rufipogon	94.49	0.00e+00	1115.00
IUUC-Osa-085811	Oryza sativa	89.17	0.00e+00	1110.00
IUUC-Ola-087361	Oryzias latipes	43.63	6.00e-147	514.00
IUUC-Oga-088015	Otolemur garnettii	42.60	1.00e-141	496.00
IUUC-Oar-090058	Ovis aries	40.90	6.00e-75	274.00
IUUC-Ptr-090631	Pan troglodytes	41.96	3.00e-54	204.00
IUUC-Pan-092306	Papio anubis	40.27	1.00e-140	493.00
IUUC-Pma-094622	Petromyzon marinus	43.41	3.00e-148	518.00
IUUC-Pno-094794	Phaeosphaeria nodorum	35.81	1.00e-103	369.00
IUUC-Ppa-095528	Physcomitrella patens	57.08	6.00e-145	507.00
IUUC-Pfo-096682	Poecilia formosa	41.79	8.00e-145	507.00
IUUC-Pab-097939	Pongo abelii	42.20	8.00e-128	450.00
IUUC-Pop-099043	Populus trichocarpa	66.61	0.00e+00	760.00
IUUC-Pca-100333	Procavia capensis	42.93	1.00e-137	483.00
IUUC-Ppe-102078	Prunus persica	60.92	0.00e+00	764.00
IUUC-Pgr-103525	Puccinia graminis	41.32	1.00e-126	446.00
IUUC-Ptt-103929	Puccinia triticina	40.91	2.00e-121	429.00
IUUC-Pte-104029	Pyrenophora teres	39.51	2.00e-125	442.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	39.35	5.00e-125	441.00
IUUC-Rno-105248	Rattus norvegicus	43.02	3.00e-138	485.00
IUUC-Sce-106381	Saccharomyces cerevisiae	38.83	9.00e-75	274.00
IUUC-Sha-106519	Sarcophilus harrisii	43.55	7.00e-145	506.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.66	3.00e-118	418.00
IUUC-Spo-108071	Schizosaccharomyces pombe	38.02	5.00e-116	411.00
IUUC-Smo-108881	Selaginella moellendorffii	58.13	0.00e+00	692.00
IUUC-Sit-110551	Setaria italica	84.34	0.00e+00	1047.00
IUUC-Sly-110970	Solanum lycopersicum	74.64	2.00e-151	528.00
IUUC-Stu-112593	Solanum tuberosum	66.72	0.00e+00	840.00
IUUC-Sar-113123	Sorex araneus	37.22	2.00e-53	201.00
IUUC-Sbi-113945	Sorghum bicolor	84.23	0.00e+00	1050.00
IUUC-Sre-115188	Sporisorium reilianum	40.23	2.00e-77	283.00
IUUC-Ssc-115352	Sus scrofa	42.35	7.00e-142	496.00
IUUC-Tru-117685	Takifugu rubripes	42.63	2.00e-146	512.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.35	6.00e-141	493.00
IUUC-Tca-121664	Theobroma cacao	63.97	0.00e+00	846.00
IUUC-Tre-122229	Trichoderma reesei	39.94	7.00e-114	404.00
IUUC-Tvi-122576	Trichoderma virens	40.25	1.00e-116	413.00
IUUC-Tae-125703	Triticum aestivum	80.81	0.00e+00	997.00
IUUC-Tur-126781	Triticum urartu	84.45	0.00e+00	944.00
IUUC-Tme-127080	Tuber melanosporum	41.51	1.00e-139	489.00
IUUC-Ttr-128514	Tursiops truncatus	44.84	4.00e-87	315.00
IUUC-Uma-129556	Ustilago maydis	40.46	1.00e-75	277.00
IUUC-Vda-129715	Verticillium dahliae	39.59	1.00e-125	443.00
IUUC-Vvi-131211	Vitis vinifera	64.73	0.00e+00	818.00
IUUC-Xma-133883	Xiphophorus maculatus	41.47	3.00e-139	488.00
IUUC-Yli-134438	Yarrowia lipolytica	38.32	8.00e-119	421.00
IUUC-Zma-135341	Zea mays	81.61	0.00e+00	706.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence