iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067065

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02048901

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000005969.2	ENSMLUT00000005971.2	ENSMLUP00000005456.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-09	36.8	136	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 136  CPICMDGYseivqnGRVIVSTECGHVFCSQCL------RDSLKNANTCPTCR 181
           ********77775555566788*********9......4559*********8 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

LKGPQPQRKR RGGAANSRQA QKRAREAAPT PVMALETEPI ELVESAGDEI VDLTCESMEP 60
VVVDLTHNDS VVIVDERRRP RRNTRRQRQD HADSCVVSSD DEELSRDRDV YVTTHTPRNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAAAGGAC CCCAACCTCA GGTCGGCTCC CTCCCTGCCT TCTCTTCCTT TTTGTTGACT 60
TTTTTGATTT GTCTTGCTGA AATCCCGTCA GTCAGGAGCT CATGTGACTG TCTCTCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	8.00e-11	60.50
IUUC-Aml-002206	Ailuropoda melanoleuca	89.18	3.00e-83	300.00
IUUC-Atr-002771	Amborella trichopoda	35.38	2.00e-09	55.50
IUUC-Apl-004120	Anas platyrhynchos	70.83	5.00e-71	259.00
IUUC-Aca-004236	Anolis carolinensis	62.43	1.00e-58	218.00
IUUC-Ame-011555	Astyanax mexicanus	51.55	5.00e-38	150.00
IUUC-Bta-012913	Bos taurus	84.49	8.00e-82	295.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	7.00e-11	60.80
IUUC-Bol-016418	Brassica oleracea	37.70	6.00e-09	54.70
IUUC-Bra-016890	Brassica rapa	36.84	1.00e-07	49.70
IUUC-Cja-019151	Callithrix jacchus	87.23	7.00e-78	282.00
IUUC-Cfa-020868	Canis familiaris	88.02	1.00e-79	288.00
IUUC-Cpo-022249	Cavia porcellus	83.68	3.00e-71	261.00
IUUC-Csa-024125	Chlorocebus sabaeus	87.70	1.00e-79	288.00
IUUC-Cin-025749	Ciona intestinalis	40.98	6.00e-14	70.50
IUUC-Csv-026318	Ciona savignyi	40.98	3.00e-13	68.20
IUUC-Dre-028145	Danio rerio	42.05	1.00e-32	132.00
IUUC-Dno-029605	Dasypus novemcinctus	87.70	5.00e-87	313.00
IUUC-Dor-030898	Dipodomys ordii	84.46	3.00e-83	300.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	7.00e-11	61.20
IUUC-Ete-032694	Echinops telfairi	82.35	1.00e-69	255.00
IUUC-Eca-033443	Equus caballus	91.44	2.00e-82	297.00
IUUC-Eeu-034603	Erinaceus europaeus	91.26	2.00e-54	203.00
IUUC-Fca-035507	Felis catus	89.30	5.00e-78	283.00
IUUC-Fal-037382	Ficedula albicollis	69.27	6.00e-65	239.00
IUUC-Gmo-038960	Gadus morhua	69.39	1.00e-18	84.70
IUUC-Gga-040493	Gallus gallus	68.78	8.00e-68	249.00
IUUC-Gac-042194	Gasterosteus aculeatus	47.53	1.00e-36	145.00
IUUC-Ggo-044726	Gorilla gorilla	89.30	1.00e-80	291.00
IUUC-Hsa-046212	Homo sapiens	89.30	1.00e-80	291.00
IUUC-Hvu-047630	Hordeum vulgare	39.34	1.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	88.36	6.00e-80	289.00
IUUC-Lpe-050920	Leersia perrieri	34.57	3.00e-11	62.00
IUUC-Loc-051907	Lepisosteus oculatus	46.39	1.00e-35	142.00
IUUC-Laf-054145	Loxodonta africana	86.77	1.00e-77	281.00
IUUC-Mcc-055689	Macaca mulatta	88.24	1.00e-79	288.00
IUUC-Meu-056654	Macropus eugenii	45.99	2.00e-39	155.00
IUUC-Mtr-058314	Medicago truncatula	43.64	3.00e-10	57.80
IUUC-Mga-059303	Meleagris gallopavo	70.68	1.00e-70	258.00
IUUC-Mmr-061355	Microcebus murinus	87.70	3.00e-79	287.00
IUUC-Mdo-062968	Monodelphis domestica	67.37	8.00e-68	249.00
IUUC-Mmu-064421	Mus musculus	84.21	5.00e-87	313.00
IUUC-Mac-064573	Musa acuminata	30.10	8.00e-12	64.30
IUUC-Mpu-066522	Mustela putorius furo	91.01	6.00e-83	299.00
IUUC-Nle-069198	Nomascus leucogenys	88.24	9.00e-80	288.00
IUUC-Opr-071141	Ochotona princeps	82.89	3.00e-82	297.00
IUUC-Oan-073341	Ornithorhynchus anatinus	67.13	2.00e-36	144.00
IUUC-Ocu-073787	Oryctolagus cuniculus	87.89	1.00e-90	325.00
IUUC-Oba-075460	Oryza barthii	40.32	3.00e-11	62.00
IUUC-Obr-076349	Oryza brachyantha	37.70	5.00e-10	58.20
IUUC-Ogl-077094	Oryza glaberrima	37.97	2.00e-12	66.20
IUUC-Ogu-078677	Oryza glumaepatula	40.32	2.00e-11	62.40
IUUC-Oin-079992	Oryza indica	37.97	2.00e-12	66.20
IUUC-Olo-080257	Oryza longistaminata	41.94	2.00e-11	62.80
IUUC-Ome-081943	Oryza meridionalis	37.97	1.00e-12	67.00
IUUC-Oni-082671	Oryza nivara	40.32	3.00e-11	62.00
IUUC-Opu-083644	Oryza punctata	40.32	4.00e-11	61.60
IUUC-Oru-084650	Oryza rufipogon	40.32	3.00e-11	62.00
IUUC-Osa-086110	Oryza sativa	37.97	1.00e-12	66.20
IUUC-Ola-086970	Oryzias latipes	43.78	4.00e-33	134.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	3.00e-10	57.80
IUUC-Oga-088242	Otolemur garnettii	88.30	7.00e-90	322.00
IUUC-Oar-089469	Ovis aries	86.77	3.00e-89	320.00
IUUC-Ptr-091254	Pan troglodytes	83.42	1.00e-73	268.00
IUUC-Pan-092919	Papio anubis	88.30	3.00e-80	290.00
IUUC-Psi-093929	Pelodiscus sinensis	69.95	4.00e-67	247.00
IUUC-Pma-094118	Petromyzon marinus	47.56	6.00e-21	91.70
IUUC-Ppa-095567	Physcomitrella patens	44.26	3.00e-11	62.00
IUUC-Pfo-097412	Poecilia formosa	47.20	3.00e-34	137.00
IUUC-Pab-098424	Pongo abelii	89.30	1.00e-80	291.00
IUUC-Pop-099483	Populus trichocarpa	37.10	6.00e-09	53.90
IUUC-Pca-100463	Procavia capensis	81.16	1.00e-45	175.00
IUUC-Pva-102594	Pteropus vampyrus	86.96	1.00e-57	215.00
IUUC-Rno-105460	Rattus norvegicus	82.81	3.00e-76	277.00
IUUC-Sha-107487	Sarcophilus harrisii	68.88	2.00e-67	247.00
IUUC-Smo-108908	Selaginella moellendorffii	37.10	6.00e-08	50.80
IUUC-Sit-109959	Setaria italica	34.43	1.00e-04	40.40
IUUC-Sar-113601	Sorex araneus	87.17	1.00e-76	278.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	6.00e-05	40.80
IUUC-Ssc-115911	Sus scrofa	90.37	6.00e-81	293.00
IUUC-Tgu-117264	Taeniopygia guttata	68.95	1.00e-62	232.00
IUUC-Tru-117663	Takifugu rubripes	49.37	2.00e-35	141.00
IUUC-Tsy-118883	Tarsius syrichta	83.78	1.00e-64	238.00
IUUC-Tae-124872	Triticum aestivum	39.34	8.00e-11	60.80
IUUC-Tur-126408	Triticum urartu	39.34	7.00e-11	60.80
IUUC-Ttr-128950	Tursiops truncatus	63.10	2.00e-61	228.00
IUUC-Vvi-130833	Vitis vinifera	40.32	3.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	59.74	3.00e-38	150.00
IUUC-Xma-133319	Xiphophorus maculatus	45.58	5.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence