iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000001246.1	ENSSHAT00000001415.1	ENSSHAP00000001399.1
ENSSHAG00000001246.1	ENSSHAT00000001416.1	ENSSHAP00000001400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-22	77.6	926	961
UBD/Beta-Prp	4.30e-52	177.3	880	1077

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f.sdtllvsGsdDgtikvWDlrtgv 34
           gHt++v+c++ f ++++ +s+s D+t++ W+l +g+
   Q: 926  GHTGEVRCVKtFgQGNYAISASKDCTLRRWNLVSGK 961
           8********8798779****************9997 PP

UBD/Beta-Prp

   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           l+g  + ++++++s +++ l++Gs+  ++ vw +++++     +l+gh+g v+cv++ ++gn+ +s+s+D t+r W+l +gk  +  
   Q: 880  LTGYHKGITAIEWSSNNKLLIVGSQNGVLVVWGMQERKSQVVhILTGHTGEVRCVKTFGQGNYAISASKDCTLRRWNLVSGKEKYVI 966
           567777899999999999999999999999999998866544499999999999999999999999999999999999666655555 PP
   S: 176  .....tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgdl 256
                t  ++++  +l +d+ +k +v+ +   t++ w+l+t e +    g  + ++  ++  p +  +v+ s++g +  Wd  +g+ 
   Q: 967  rdgifTDRKEPYFCCLHVDE-KKKVVYSASGLTINAWNLETAEAIFHIVGDARDPWLWATVfPSSSEVVTLSKEGLVCTWDAHTGKS 1052
           54566776778888888887.589999999999999999999998888887766666665559999999999999999999888886 PP
   S: 257  l..ktlqlhnssvisvav.lsfgdn 278
              ++l++ ++ ++ + v l+ +++
   Q: 1053 RskHCLSNLKEEIWTSGVsLQKQGR 1077
           5114555555777777663333333 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MDAEREALLG AAYPEVQTFC QKHGLMLEVV DLRWGLPTLE AVDHTTTDLC LEEIAVCQKL 60
SAGPTFIALV GDQYGHCPIP RLIEEKEFQA LCAQLTKNPN SLTLLAQWFW KDENAVPPVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCTG AGAGAGAGGC TCTGCTGGGA GCTGCATACC CTGAAGTACA GACCTTTTGT 60
CAGAAGCATG GCTTAATGTT GGAGGTAATG TCTCCTTTTA GAGTTCTGTG CTAGGGACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027417--P-loop_NTPase
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

shr:100915568

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001525	Ailuropoda melanoleuca	62.08	0.00e+00	1988.00
IUUC-Apl-003467	Anas platyrhynchos	56.77	7.00e-79	286.00
IUUC-Ame-011400	Astyanax mexicanus	37.26	0.00e+00	1038.00
IUUC-Bta-013223	Bos taurus	62.09	0.00e+00	1697.00
IUUC-Cel-018404	Caenorhabditis elegans	30.55	5.00e-113	403.00
IUUC-Cja-018773	Callithrix jacchus	60.33	0.00e+00	1163.00
IUUC-Cfa-020334	Canis familiaris	63.61	0.00e+00	2013.00
IUUC-Cpo-022316	Cavia porcellus	52.93	0.00e+00	1532.00
IUUC-Csa-023631	Chlorocebus sabaeus	60.89	0.00e+00	1908.00
IUUC-Cin-025646	Ciona intestinalis	31.72	1.00e-122	434.00
IUUC-Csv-026191	Ciona savignyi	25.82	2.00e-18	86.70
IUUC-Dre-028241	Danio rerio	37.44	0.00e+00	1018.00
IUUC-Dno-029990	Dasypus novemcinctus	60.86	4.00e-158	550.00
IUUC-Dor-030869	Dipodomys ordii	53.10	2.00e-151	530.00
IUUC-Dme-032096	Drosophila melanogaster	22.29	1.00e-27	119.00
IUUC-Ete-033059	Echinops telfairi	65.18	0.00e+00	669.00
IUUC-Eca-033718	Equus caballus	58.71	0.00e+00	1874.00
IUUC-Fca-035748	Felis catus	62.11	0.00e+00	1848.00
IUUC-Gac-041507	Gasterosteus aculeatus	35.03	0.00e+00	767.00
IUUC-Ggo-044551	Gorilla gorilla	58.66	0.00e+00	1808.00
IUUC-Hsa-046787	Homo sapiens	60.92	0.00e+00	1911.00
IUUC-Itr-048104	Ictidomys tridecemlineatus	54.41	0.00e+00	1009.00
IUUC-Lch-049578	Latimeria chalumnae	51.15	0.00e+00	1558.00
IUUC-Loc-052039	Lepisosteus oculatus	44.76	0.00e+00	1365.00
IUUC-Laf-054240	Loxodonta africana	62.01	0.00e+00	2016.00
IUUC-Mcc-054657	Macaca mulatta	55.39	0.00e+00	1610.00
IUUC-Meu-056591	Macropus eugenii	85.78	0.00e+00	1536.00
IUUC-Mmr-061577	Microcebus murinus	59.07	0.00e+00	1848.00
IUUC-Mdo-062895	Monodelphis domestica	88.33	0.00e+00	2529.00
IUUC-Mmu-063866	Mus musculus	58.89	0.00e+00	1856.00
IUUC-Mpu-066510	Mustela putorius furo	61.57	0.00e+00	1985.00
IUUC-Mlu-067855	Myotis lucifugus	62.02	0.00e+00	1921.00
IUUC-Nle-069557	Nomascus leucogenys	57.78	0.00e+00	1737.00
IUUC-Opr-071196	Ochotona princeps	48.81	8.00e-137	481.00
IUUC-Ont-072070	Oreochromis niloticus	36.02	0.00e+00	847.00
IUUC-Oan-073437	Ornithorhynchus anatinus	64.71	0.00e+00	1425.00
IUUC-Ocu-074941	Oryctolagus cuniculus	60.17	3.00e-38	151.00
IUUC-Ola-086624	Oryzias latipes	33.86	0.00e+00	719.00
IUUC-Oga-088313	Otolemur garnettii	62.74	0.00e+00	1789.00
IUUC-Oar-090123	Ovis aries	61.38	0.00e+00	1939.00
IUUC-Ptr-090552	Pan troglodytes	61.62	0.00e+00	825.00
IUUC-Psi-093963	Pelodiscus sinensis	57.54	0.00e+00	1734.00
IUUC-Pfo-096197	Poecilia formosa	35.02	0.00e+00	872.00
IUUC-Pab-097755	Pongo abelii	61.32	0.00e+00	704.00
IUUC-Pca-100809	Procavia capensis	61.40	0.00e+00	966.00
IUUC-Pva-102554	Pteropus vampyrus	60.30	0.00e+00	1685.00
IUUC-Rno-105174	Rattus norvegicus	54.01	0.00e+00	1620.00
IUUC-Sar-113168	Sorex araneus	53.89	0.00e+00	719.00
IUUC-Tru-118251	Takifugu rubripes	39.28	8.00e-164	571.00
IUUC-Tsy-119276	Tarsius syrichta	63.74	7.00e-97	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence