iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121781

Ensembl Protein ID

EOY22658

UniProt Accession

A0A061G013; A0A061G013_THECC

Genbank Protein ID

EOY22658.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein, putative isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014765

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014765	EOY22658	EOY22658
TCM_014765	EOY22659	EOY22659

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-10	40.7	535	624
E3 activity/RING/RING	6.50e-15	56.3	166	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggk...................tcPvtrqplte..edlvPnltlrrliqawceens 73
           +++ CpI +e+ + Pv++p+G+ + +s++e  +      +                   +cP + + l+e  ++l+ n++l++li + + en+
   Q: 535  KQYGCPICKEVLEMPVTTPCGHNFCKSCLEGVFagH---SlvrernaggrplrskrnvlKCPSCPSDLSEylNNLKVNIELKNLIAKQIGENE 624
           5678**************************977440...334555567779999999999999999996522688999*****9998776665 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++++ p+++pCgH f+++C+    +++   +++ +CPlCr
   Q: 166  CSICLKMLDR-PVSTPCGHNFCLKCF----QSSTRRQRNSTCPLCR 206
           **********.**************8....5558899999*****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGNADQKPTP GKKRSCDPTG RCMLCKTWPD EEDIIDCIIC KTPWHLTCLI AVRESLALED 60
IGMGCPDCDD NNNPTKEELA VVVDEATVTG GASSSSGDTI VAQIMAIQAD GSLTEEEKAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAATG CTGACCAGAA GCCGACGCCT GGTAAGAAGC GGTCTTGCGA CCCAACAGGC 60
CGTTGCATGT TATGCAAAAC CTGGCCAGAC GAGGAAGATA TAATCGATTG CATCATCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR027370--Znf-RING_LisH
IPR011011--Znf_FYVE_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_014765

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013703	Botrytis cinerea	31.33	1.00e-13	70.50
IUUC-Csv-026112	Ciona savignyi	33.64	1.00e-07	51.60
IUUC-Cgl-026498	Colletotrichum gloeosporioides	36.22	2.00e-13	69.70
IUUC-Dre-028200	Danio rerio	32.76	1.00e-46	181.00
IUUC-Dor-031084	Dipodomys ordii	33.59	2.00e-48	186.00
IUUC-Dse-031392	Dothistroma septosporum	37.82	3.00e-12	64.30
IUUC-Ete-032375	Echinops telfairi	25.68	4.00e-11	63.20
IUUC-Eca-033266	Equus caballus	31.99	5.00e-46	178.00
IUUC-Ggr-039874	Gaeumannomyces graminis	30.72	7.00e-11	61.20
IUUC-Loc-051806	Lepisosteus oculatus	33.33	9.00e-47	181.00
IUUC-Mpo-057318	Magnaporthe poae	31.58	9.00e-11	60.80
IUUC-Mla-058836	Melampsora laricipopulina	51.61	1.00e-42	166.00
IUUC-Mmu-063738	Mus musculus	33.08	3.00e-47	182.00
IUUC-Nle-069901	Nomascus leucogenys	31.75	5.00e-44	171.00
IUUC-Opr-070813	Ochotona princeps	56.86	9.00e-12	64.30
IUUC-Ocu-074748	Oryctolagus cuniculus	33.25	1.00e-44	174.00
IUUC-Oga-088218	Otolemur garnettii	33.93	2.00e-44	173.00
IUUC-Oar-090189	Ovis aries	32.64	5.00e-44	172.00
IUUC-Pgr-103644	Puccinia graminis	55.86	1.00e-40	160.00
IUUC-Ptt-103867	Puccinia triticina	54.19	6.00e-43	167.00
IUUC-Pyt-104740	Pyrenophora triticirepentis	28.63	3.00e-16	79.70
IUUC-Rno-105345	Rattus norvegicus	33.08	2.00e-47	183.00
IUUC-Ssl-108645	Sclerotinia sclerotiorum	33.65	1.00e-06	48.50
IUUC-Vda-129727	Verticillium dahliae	35.34	1.00e-13	70.10
IUUC-Xtr-132432	Xenopus tropicalis	32.44	4.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence