iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012487

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02009280

Gene Name

USP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000000149.5	ENSBTAT00000000172.5	ENSBTAP00000000172.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-79	268.3	41	481

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle...kkkeklneenpkepkg.ellkslqklfeelwkskkkavsprellkalkkeaeefsg 86
           G++N+g tCY+NS+LQ+L+++pe+re+l++   ++  +l+++++++ k   +  +lq+lf++l+  ++kavs+ +l++++++++ e  +
   Q: 41   GIRNQGGTCYLNSLLQTLHFTPEFREALFSlglEELGSLEDKDKPDAKVrIIPLQLQRLFAQLLLLDQKAVSTADLTDSFGWTSDE--E 127
           9*****************************666444445444444433337889******************************98..* PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           ++q+D+qE+ ++l+++le++l                            +++++li++l++g++ +qi+c+ec+nvs+++e+fldl+++
   Q: 128  MRQHDVQELNRILFSALETSL--------------------------VGTSGHDLINRLYHGTIVNQIVCKECKNVSEKQEDFLDLTVA 190
           *********************..........................789*************************************** PP
   S: 176  vpgkeetkkeslqdcL.esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           v++ +      l+d+L +++++ee ++++n y+c +c+++++a k+ kl+klP++L++ L Rf+f+  ++ r k +++++fpl+++l+p
   Q: 191  VKNVS-----GLEDALwNMYVEEEVFDCDNLYHCGNCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYKETSCYTFPLRINLKP 274
           *****.....9****************************************************************************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslssGHYvayvkn................................................... 301
           fc+++e ++  ++ Y+L++v++H+G++ +GHY++y+k+                                                   
   Q: 275  FCEQSELDDL-EYMYDLFSVIIHKGGCYGGHYHVYIKDvdhlgnwqfqedkskpdvnlediqnkeevddplmilkaillqeesnlipvd 362
           ****999987.9***************************************************************************** PP
   S: 302  ...............................................................................ekgk....Wl 307
                                                                                          +       W+
   Q: 363  qlgqkllkkigiswnkkyrkqygplrkflqvhsqifllssdestvrllkdsslqaesdiqrndqrlfktltsesltlndR--PscphWF 449
           *********************************************************99999999999998888876541..25567** PP
   S: 308  lfdDskVtevkeeevleetg..staYvlfYkr 337
            ++Ds+V+++ke++++++ +  ++aY+lfY++
   Q: 450  DINDSTVQPIKEKDIEQQFQgkESAYMLFYRK 481
           *****************9889*********98 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MFGDLFEEDY SSVSNNNGKG KRLKTKALEP PAPREFTNLS GIRNQGGTCY LNSLLQTLHF 60
TPEFREALFS LGLEELGSLE DKDKPDAKVR IIPLQLQRLF AQLLLLDQKA VSTADLTDSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTGGGG ACCTATTTGA AGAAGATTAT TCCAGTGTGT CAAATAATAA TGGAAAAGGG 60
AAGAGATTAA AGACCAAAGC TTTGGAGCCA CCTGCTCCTA GAGAATTCAC CAATTTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001216	Ailuropoda melanoleuca	84.00	0.00e+00	1942.00
IUUC-Apl-004105	Anas platyrhynchos	63.09	0.00e+00	1527.00
IUUC-Aca-004715	Anolis carolinensis	61.48	0.00e+00	1471.00
IUUC-Ame-011073	Astyanax mexicanus	47.58	0.00e+00	1040.00
IUUC-Cja-018937	Callithrix jacchus	83.02	0.00e+00	2026.00
IUUC-Cfa-020645	Canis familiaris	79.95	0.00e+00	1254.00
IUUC-Cpo-022160	Cavia porcellus	77.79	0.00e+00	1898.00
IUUC-Csa-023078	Chlorocebus sabaeus	82.85	0.00e+00	2063.00
IUUC-Cho-025013	Choloepus hoffmanni	64.76	0.00e+00	806.00
IUUC-Csv-026193	Ciona savignyi	56.28	2.00e-59	221.00
IUUC-Dre-027416	Danio rerio	49.42	0.00e+00	1149.00
IUUC-Dno-029639	Dasypus novemcinctus	79.77	0.00e+00	1651.00
IUUC-Dor-030624	Dipodomys ordii	90.70	8.00e-154	538.00
IUUC-Ete-032626	Echinops telfairi	62.37	0.00e+00	736.00
IUUC-Eca-034208	Equus caballus	86.41	0.00e+00	2116.00
IUUC-Eeu-035340	Erinaceus europaeus	50.91	3.00e-102	366.00
IUUC-Fca-035886	Felis catus	75.58	0.00e+00	784.00
IUUC-Fal-036925	Ficedula albicollis	62.46	0.00e+00	1417.00
IUUC-Gmo-038597	Gadus morhua	45.72	0.00e+00	895.00
IUUC-Gga-041171	Gallus gallus	62.39	0.00e+00	1498.00
IUUC-Gac-041362	Gasterosteus aculeatus	46.53	0.00e+00	964.00
IUUC-Ggo-045069	Gorilla gorilla	81.64	0.00e+00	1855.00
IUUC-Hsa-046715	Homo sapiens	83.74	0.00e+00	2057.00
IUUC-Itr-049006	Ictidomys tridecemlineatus	78.77	0.00e+00	1899.00
IUUC-Lch-050182	Latimeria chalumnae	52.53	0.00e+00	1167.00
IUUC-Loc-052705	Lepisosteus oculatus	54.12	0.00e+00	1270.00
IUUC-Laf-054132	Loxodonta africana	81.81	0.00e+00	2017.00
IUUC-Mcc-055734	Macaca mulatta	83.50	0.00e+00	2072.00
IUUC-Meu-056135	Macropus eugenii	48.05	5.00e-118	419.00
IUUC-Mga-060092	Meleagris gallopavo	62.40	0.00e+00	1481.00
IUUC-Mmr-061546	Microcebus murinus	80.29	0.00e+00	1943.00
IUUC-Mdo-061935	Monodelphis domestica	63.59	0.00e+00	1513.00
IUUC-Mmu-063630	Mus musculus	77.93	0.00e+00	1924.00
IUUC-Mpu-066579	Mustela putorius furo	81.41	0.00e+00	2017.00
IUUC-Mlu-068034	Myotis lucifugus	86.50	0.00e+00	2042.00
IUUC-Nle-069082	Nomascus leucogenys	81.49	0.00e+00	1700.00
IUUC-Opr-070953	Ochotona princeps	69.77	0.00e+00	963.00
IUUC-Ont-072435	Oreochromis niloticus	47.80	0.00e+00	1101.00
IUUC-Oan-073339	Ornithorhynchus anatinus	67.06	0.00e+00	1565.00
IUUC-Ocu-073760	Oryctolagus cuniculus	79.68	0.00e+00	1950.00
IUUC-Ola-087015	Oryzias latipes	47.18	0.00e+00	934.00
IUUC-Oga-088960	Otolemur garnettii	82.30	0.00e+00	2012.00
IUUC-Oar-089853	Ovis aries	96.52	0.00e+00	2362.00
IUUC-Ptr-091093	Pan troglodytes	83.50	0.00e+00	2050.00
IUUC-Pan-091962	Papio anubis	81.89	0.00e+00	2042.00
IUUC-Psi-093691	Pelodiscus sinensis	65.36	0.00e+00	1578.00
IUUC-Pma-094428	Petromyzon marinus	66.19	3.00e-92	331.00
IUUC-Pfo-096983	Poecilia formosa	48.11	0.00e+00	1030.00
IUUC-Pab-097860	Pongo abelii	82.69	0.00e+00	1894.00
IUUC-Pca-100514	Procavia capensis	78.20	0.00e+00	652.00
IUUC-Pva-102771	Pteropus vampyrus	83.29	0.00e+00	1894.00
IUUC-Rno-105405	Rattus norvegicus	77.12	0.00e+00	1881.00
IUUC-Sha-107376	Sarcophilus harrisii	65.02	0.00e+00	1479.00
IUUC-Ssc-115819	Sus scrofa	83.10	0.00e+00	1467.00
IUUC-Tgu-117262	Taeniopygia guttata	61.35	0.00e+00	1474.00
IUUC-Tru-117601	Takifugu rubripes	47.58	0.00e+00	1091.00
IUUC-Tsy-118996	Tarsius syrichta	72.77	0.00e+00	1584.00
IUUC-Tni-120682	Tetraodon nigroviridis	43.77	0.00e+00	882.00
IUUC-Tbe-127616	Tupaia belangeri	63.71	0.00e+00	1097.00
IUUC-Ttr-129075	Tursiops truncatus	85.53	0.00e+00	1979.00
IUUC-Vpa-130108	Vicugna pacos	86.45	0.00e+00	1878.00
IUUC-Xtr-132623	Xenopus tropicalis	51.93	0.00e+00	1169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence