iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101966

Ensembl Protein ID

EMJ09795

UniProt Accession

M5WSK6; M5WSK6_PRUPE

Genbank Protein ID

EMJ09795.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB639090

Gene Name

DDB2; PRUPE_ppa022497mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa022497mg	EMJ09795	EMJ09795

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-16	58.6	164	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+ +vt+l+f ++  ++l+sG   g++ vWD+
   Q: 164  HSRRVTSLEFhPTknNILLSGDKKGQLGVWDF 195
           999********444699**************6 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MPPQTRRMAF PKVVIERETD SEQSSSEEDE ADVEQEEEEV LESENEGKVE QALDEKKKGK 60
APITISLKKV CKVCKKPGHE AGFKGATYID CPMKPCFLCK MPGHTTVACP HRVATEYGVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCCCAC AAACTAGAAG AATGGCGTTC CCGAAGGTGG TCATTGAGAG AGAAACGGAC 60
TCTGAGCAAA GCTCATCCGA AGAAGACGAA GCAGACGTAG AACAAGAGGA AGAGGAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

pper:PRUPE_ppa022497mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	68.49	0.00e+00	670.00
IUUC-Aml-002203	Ailuropoda melanoleuca	29.88	8.00e-34	137.00
IUUC-Atr-002957	Amborella trichopoda	74.67	0.00e+00	714.00
IUUC-Apl-003832	Anas platyrhynchos	33.13	1.00e-40	159.00
IUUC-Aca-004358	Anolis carolinensis	33.33	2.00e-39	155.00
IUUC-Aly-006296	Arabidopsis lyrata	76.75	0.00e+00	724.00
IUUC-Ath-007115	Arabidopsis thaliana	71.79	0.00e+00	738.00
IUUC-Ame-010817	Astyanax mexicanus	30.61	4.00e-37	148.00
IUUC-Bta-012914	Bos taurus	29.88	4.00e-36	144.00
IUUC-Bdi-014261	Brachypodium distachyon	69.96	0.00e+00	686.00
IUUC-Bol-015317	Brassica oleracea	74.40	0.00e+00	714.00
IUUC-Bra-016848	Brassica rapa	74.13	0.00e+00	714.00
IUUC-Cja-018967	Callithrix jacchus	29.57	1.00e-35	142.00
IUUC-Cfa-021238	Canis familiaris	30.49	1.00e-31	130.00
IUUC-Cpo-022063	Cavia porcellus	30.72	2.00e-35	142.00
IUUC-Csa-023382	Chlorocebus sabaeus	30.18	1.00e-35	143.00
IUUC-Cho-024931	Choloepus hoffmanni	24.00	2.00e-09	56.60
IUUC-Dre-028732	Danio rerio	30.24	6.00e-34	137.00
IUUC-Dor-030461	Dipodomys ordii	33.19	1.00e-28	119.00
IUUC-Ete-033038	Echinops telfairi	27.96	6.00e-31	127.00
IUUC-Eca-033772	Equus caballus	30.49	2.00e-35	142.00
IUUC-Eeu-035234	Erinaceus europaeus	27.88	9.00e-12	64.30
IUUC-Fca-036095	Felis catus	29.94	1.00e-31	130.00
IUUC-Gmo-039683	Gadus morhua	32.06	1.00e-42	166.00
IUUC-Gga-040530	Gallus gallus	33.74	3.00e-42	165.00
IUUC-Gac-041517	Gasterosteus aculeatus	30.34	1.00e-33	136.00
IUUC-Gma-043378	Glycine max	76.57	0.00e+00	795.00
IUUC-Ggo-045364	Gorilla gorilla	30.18	2.00e-36	145.00
IUUC-Hsa-046354	Homo sapiens	30.18	2.00e-36	145.00
IUUC-Hvu-047151	Hordeum vulgare	68.44	3.00e-128	450.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.71	9.00e-37	146.00
IUUC-Lpe-051256	Leersia perrieri	67.24	0.00e+00	638.00
IUUC-Loc-052398	Lepisosteus oculatus	29.94	1.00e-36	147.00
IUUC-Laf-053562	Loxodonta africana	30.49	2.00e-34	139.00
IUUC-Mcc-055197	Macaca mulatta	29.89	5.00e-30	124.00
IUUC-Meu-056151	Macropus eugenii	32.04	2.00e-31	128.00
IUUC-Mtr-057940	Medicago truncatula	75.69	0.00e+00	768.00
IUUC-Mga-059923	Meleagris gallopavo	34.94	6.00e-44	171.00
IUUC-Mmr-061465	Microcebus murinus	29.54	5.00e-29	120.00
IUUC-Mdo-063063	Monodelphis domestica	30.09	1.00e-37	149.00
IUUC-Mmu-064294	Mus musculus	30.70	7.00e-37	147.00
IUUC-Mac-065598	Musa acuminata	71.66	0.00e+00	676.00
IUUC-Mpu-066831	Mustela putorius furo	30.49	2.00e-32	132.00
IUUC-Mlu-067222	Myotis lucifugus	30.25	2.00e-34	139.00
IUUC-Nle-069581	Nomascus leucogenys	30.18	2.00e-36	145.00
IUUC-Opr-070644	Ochotona princeps	30.70	4.00e-35	141.00
IUUC-Ont-072605	Oreochromis niloticus	29.85	8.00e-34	137.00
IUUC-Oan-072973	Ornithorhynchus anatinus	31.75	2.00e-37	148.00
IUUC-Ocu-074615	Oryctolagus cuniculus	31.40	5.00e-37	147.00
IUUC-Oba-075283	Oryza barthii	67.24	2.00e-179	621.00
IUUC-Obr-076605	Oryza brachyantha	68.12	0.00e+00	663.00
IUUC-Ogl-077512	Oryza glaberrima	68.26	0.00e+00	636.00
IUUC-Ogu-078329	Oryza glumaepatula	67.46	1.00e-179	621.00
IUUC-Oin-079980	Oryza indica	67.24	3.00e-179	620.00
IUUC-Olo-080516	Oryza longistaminata	66.82	2.00e-177	614.00
IUUC-Ome-081415	Oryza meridionalis	67.67	0.00e+00	634.00
IUUC-Oni-082985	Oryza nivara	67.24	3.00e-179	620.00
IUUC-Opu-084159	Oryza punctata	68.78	0.00e+00	657.00
IUUC-Oru-085137	Oryza rufipogon	68.56	0.00e+00	641.00
IUUC-Osa-085614	Oryza sativa	68.56	0.00e+00	641.00
IUUC-Ola-087044	Oryzias latipes	29.27	8.00e-38	150.00
IUUC-Oga-088274	Otolemur garnettii	30.18	5.00e-35	140.00
IUUC-Oar-089826	Ovis aries	29.88	6.00e-36	144.00
IUUC-Ptr-091631	Pan troglodytes	30.18	2.00e-36	145.00
IUUC-Pan-092535	Papio anubis	30.18	2.00e-36	145.00
IUUC-Psi-093815	Pelodiscus sinensis	31.61	1.00e-36	146.00
IUUC-Pma-094474	Petromyzon marinus	31.82	1.00e-36	146.00
IUUC-Ppa-095414	Physcomitrella patens	57.72	5.00e-164	570.00
IUUC-Pfo-096559	Poecilia formosa	31.67	8.00e-38	150.00
IUUC-Pab-098528	Pongo abelii	30.18	2.00e-36	145.00
IUUC-Pop-100064	Populus trichocarpa	78.52	0.00e+00	815.00
IUUC-Pca-100803	Procavia capensis	29.88	9.00e-35	140.00
IUUC-Pva-103213	Pteropus vampyrus	30.03	5.00e-36	144.00
IUUC-Rno-105087	Rattus norvegicus	31.31	1.00e-37	150.00
IUUC-Sha-107466	Sarcophilus harrisii	32.27	4.00e-39	154.00
IUUC-Smo-109285	Selaginella moellendorffii	56.58	4.00e-163	566.00
IUUC-Sit-109968	Setaria italica	69.61	0.00e+00	632.00
IUUC-Sly-111495	Solanum lycopersicum	77.07	0.00e+00	759.00
IUUC-Sar-113272	Sorex araneus	30.70	1.00e-33	136.00
IUUC-Sbi-114706	Sorghum bicolor	65.10	5.00e-168	583.00
IUUC-Ssc-115437	Sus scrofa	30.18	5.00e-33	134.00
IUUC-Tgu-116602	Taeniopygia guttata	32.17	7.00e-42	164.00
IUUC-Tru-118698	Takifugu rubripes	31.85	4.00e-33	134.00
IUUC-Tsy-119027	Tarsius syrichta	30.39	5.00e-29	120.00
IUUC-Tni-119787	Tetraodon nigroviridis	30.25	1.00e-39	156.00
IUUC-Tca-121447	Theobroma cacao	78.97	0.00e+00	798.00
IUUC-Tae-123253	Triticum aestivum	69.52	0.00e+00	682.00
IUUC-Tur-126724	Triticum urartu	70.39	0.00e+00	673.00
IUUC-Tbe-127680	Tupaia belangeri	27.18	1.00e-23	102.00
IUUC-Vvi-131001	Vitis vinifera	75.82	0.00e+00	791.00
IUUC-Xtr-132266	Xenopus tropicalis	34.56	4.00e-45	174.00
IUUC-Xma-133034	Xiphophorus maculatus	29.71	7.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence