iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017541

Ensembl Protein ID

Bra000849.1-P

UniProt Accession

M4C9H0; M4C9H0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000849	Bra000849.1	Bra000849.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-26	90.2	267	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           Ht++v+ ++f   s++l++sG+dD+ +kvWD
   Q: 267  HTSDVNTVCFadeSGNLILSGGDDNLCKVWD 297
           ***********8766**************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFFGPSEFDV DDMGYAMSRL ETESDAGRDF SGVGSSSSGS HISSEHLDHD DINQITKLKS 60
SPHQRYSRVV PGRHELPVST VRMLAGRESN FSGRGGRFSA ADCCHMLSRY LPVKGPWLVD 120

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Nucleotide Sequence
(Fasta)

ATGTTTTTTG GACCAAGTGA GTTTGATGTT GATGACATGG GTTATGCAAT GAGTAGACTT 60
GAGACTGAAT CCGATGCTGG AAGAGACTTT TCTGGAGTTG GTAGTAGTAG TAGTGGTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017399--DCAF11/LEC14B
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000492	Aegilops tauschii	56.80	6.00e-134	470.00
IUUC-Aca-005081	Anolis carolinensis	39.90	5.00e-88	318.00
IUUC-Ame-011825	Astyanax mexicanus	40.97	2.00e-78	286.00
IUUC-Bgr-012310	Blumeria graminis	37.92	2.00e-65	242.00
IUUC-Bol-016065	Brassica oleracea	97.56	0.00e+00	964.00
IUUC-Cel-018145	Caenorhabditis elegans	39.12	8.00e-65	241.00
IUUC-Cja-018940	Callithrix jacchus	41.55	3.00e-89	322.00
IUUC-Cre-022728	Chlamydomonas reinhardtii	48.10	2.00e-62	231.00
IUUC-Cho-024797	Choloepus hoffmanni	55.45	6.00e-27	115.00
IUUC-Cme-027273	Cyanidioschyzon merolae	32.92	1.00e-51	197.00
IUUC-Dre-028711	Danio rerio	41.83	4.00e-86	311.00
IUUC-Dme-031925	Drosophila melanogaster	32.71	1.00e-56	213.00
IUUC-Fca-035615	Felis catus	43.28	6.00e-89	321.00
IUUC-Gmo-038731	Gadus morhua	41.52	3.00e-84	305.00
IUUC-Gac-041615	Gasterosteus aculeatus	40.79	6.00e-83	301.00
IUUC-Lch-050257	Latimeria chalumnae	34.06	2.00e-53	203.00
IUUC-Lpe-051521	Leersia perrieri	61.45	2.00e-155	542.00
IUUC-Mpo-057340	Magnaporthe poae	36.98	1.00e-66	247.00
IUUC-Mla-058873	Melampsora laricipopulina	37.14	3.00e-63	236.00
IUUC-Mvi-060439	Microbotryum violaceum	37.99	8.00e-73	268.00
IUUC-Mac-064473	Musa acuminata	66.74	2.00e-171	594.00
IUUC-Opr-070605	Ochotona princeps	42.86	3.00e-90	325.00
IUUC-Ont-072411	Oreochromis niloticus	41.02	9.00e-82	297.00
IUUC-Ocu-074078	Oryctolagus cuniculus	43.28	1.00e-88	320.00
IUUC-Ola-086329	Oryzias latipes	42.86	3.00e-85	308.00
IUUC-Pma-094148	Petromyzon marinus	49.80	5.00e-68	250.00
IUUC-Ppa-095260	Physcomitrella patens	63.38	4.00e-155	541.00
IUUC-Pfo-096424	Poecilia formosa	40.84	4.00e-85	308.00
IUUC-Pgr-103327	Puccinia graminis	37.50	4.00e-61	229.00
IUUC-Pyt-104745	Pyrenophora triticirepentis	46.27	6.00e-59	221.00
IUUC-Smo-109019	Selaginella moellendorffii	58.69	1.00e-129	456.00
IUUC-Sit-110204	Setaria italica	63.16	3.00e-163	567.00
IUUC-Tru-118536	Takifugu rubripes	42.32	2.00e-83	302.00
IUUC-Tni-120264	Tetraodon nigroviridis	42.42	4.00e-84	305.00
IUUC-Vpa-130542	Vicugna pacos	51.09	2.00e-35	143.00
IUUC-Xma-133165	Xiphophorus maculatus	41.75	5.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence