iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020380

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03004737

Gene Name

WDR47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000019867.3	ENSCAFT00000031610.3	ENSCAFP00000029427.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-30	102.4	585	622
UBD/Beta-Prp	5.40e-42	144.3	489	747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ + +l  +s+++++sGs D+t++ WDlr   +++
   Q: 585  GHTGHILALYtWSGWMIASGSQDKTVRFWDLRVPSCVR 622
           89999***966977*****************9888875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  +  +++       ++s h+++++++ f +  +    il++++  D +i+  d + g
   Q: 489  NKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQRG 577
           68*****************************99999999889888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +l+l     g  ++sGs+d+t+r wdl+  +c++    t+ g+ ++v +v+v+p+g+ll++G  D+ ++l+d++ g+
   Q: 578  QGLHALSGHTGHILALYTWS-GWMIASGSQDKTVRFWDLRVPSCVRVvgtTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGR 665
           **************997777.9***********************99999*************************************** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++     h ++v+s+ f++   +l++gs+d ++k+ dlq    ++  ++ + +h+d v + r + +d  ++s s+D+++ +W
   Q: 666  MVQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQgdltKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 747
           *****98.********************************99977788*********************************** PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MTAEETVNVK EVEIIKLILD FLNSKKLHIS MLALEKESGV INGLFSDDML FLRQLILDGQ 60
WDEVLQFIQP LECMEKFDKK RFRYIILKQK FLEALCVNNA MSAEDEPQHL EFTMQEAVQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGATCTTC AAGGAACATC ATTGTATATG TATCTTTGTG TATATTTGCA AGTACTTTTT 60
CAGGATAGGT TTCTAGAAGT GGAATTGGTG AGTCAGAGTA TAAACATTTA AAATTTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	97.36	0.00e+00	1036.00
IUUC-Apl-003954	Anas platyrhynchos	88.60	0.00e+00	932.00
IUUC-Aca-004766	Anolis carolinensis	84.01	0.00e+00	858.00
IUUC-Ame-010725	Astyanax mexicanus	69.46	1.00e-177	617.00
IUUC-Bta-013072	Bos taurus	93.32	0.00e+00	978.00
IUUC-Cel-018667	Caenorhabditis elegans	48.02	6.00e-93	335.00
IUUC-Cja-018835	Callithrix jacchus	94.89	0.00e+00	1007.00
IUUC-Cpo-021883	Cavia porcellus	93.66	0.00e+00	961.00
IUUC-Csa-023467	Chlorocebus sabaeus	94.89	0.00e+00	1009.00
IUUC-Cho-024342	Choloepus hoffmanni	82.63	0.00e+00	893.00
IUUC-Cin-025112	Ciona intestinalis	43.08	5.00e-73	267.00
IUUC-Dre-027530	Danio rerio	70.42	0.00e+00	721.00
IUUC-Dno-029290	Dasypus novemcinctus	95.61	0.00e+00	1010.00
IUUC-Dor-030258	Dipodomys ordii	72.23	0.00e+00	720.00
IUUC-Dme-032040	Drosophila melanogaster	53.01	1.00e-102	366.00
IUUC-Ete-032248	Echinops telfairi	93.06	2.00e-128	453.00
IUUC-Eca-033623	Equus caballus	96.49	0.00e+00	1025.00
IUUC-Fca-036425	Felis catus	97.19	0.00e+00	1018.00
IUUC-Fal-036661	Ficedula albicollis	87.19	0.00e+00	900.00
IUUC-Gmo-039554	Gadus morhua	65.62	0.00e+00	898.00
IUUC-Gga-041177	Gallus gallus	86.99	0.00e+00	902.00
IUUC-Gac-042049	Gasterosteus aculeatus	67.98	0.00e+00	699.00
IUUC-Ggo-044833	Gorilla gorilla	95.07	0.00e+00	1015.00
IUUC-Hsa-046084	Homo sapiens	95.42	0.00e+00	1019.00
IUUC-Lch-050313	Latimeria chalumnae	72.65	0.00e+00	789.00
IUUC-Loc-051790	Lepisosteus oculatus	75.09	0.00e+00	793.00
IUUC-Laf-053521	Loxodonta africana	94.38	0.00e+00	997.00
IUUC-Mcc-055053	Macaca mulatta	94.89	0.00e+00	1009.00
IUUC-Meu-056734	Macropus eugenii	93.31	1.00e-175	610.00
IUUC-Mga-059381	Meleagris gallopavo	87.54	0.00e+00	909.00
IUUC-Mmr-060859	Microcebus murinus	95.95	0.00e+00	1017.00
IUUC-Mdo-062501	Monodelphis domestica	89.27	0.00e+00	842.00
IUUC-Mmu-063126	Mus musculus	92.61	0.00e+00	963.00
IUUC-Mpu-066718	Mustela putorius furo	95.80	0.00e+00	676.00
IUUC-Mlu-067246	Myotis lucifugus	95.25	0.00e+00	1004.00
IUUC-Nle-069807	Nomascus leucogenys	95.25	0.00e+00	1017.00
IUUC-Opr-070862	Ochotona princeps	85.35	2.00e-64	240.00
IUUC-Ont-072519	Oreochromis niloticus	69.86	0.00e+00	732.00
IUUC-Oan-072740	Ornithorhynchus anatinus	89.62	0.00e+00	787.00
IUUC-Ocu-074898	Oryctolagus cuniculus	95.60	0.00e+00	978.00
IUUC-Ola-086396	Oryzias latipes	70.68	0.00e+00	725.00
IUUC-Oga-088563	Otolemur garnettii	95.60	0.00e+00	1012.00
IUUC-Oar-089926	Ovis aries	95.77	0.00e+00	1011.00
IUUC-Ptr-090706	Pan troglodytes	95.25	0.00e+00	1015.00
IUUC-Pan-091740	Papio anubis	95.07	0.00e+00	1010.00
IUUC-Psi-093938	Pelodiscus sinensis	86.78	0.00e+00	917.00
IUUC-Pfo-096531	Poecilia formosa	70.75	0.00e+00	732.00
IUUC-Pab-098312	Pongo abelii	94.89	0.00e+00	1011.00
IUUC-Pca-101100	Procavia capensis	90.27	0.00e+00	728.00
IUUC-Pva-102734	Pteropus vampyrus	83.56	0.00e+00	641.00
IUUC-Rno-105625	Rattus norvegicus	92.27	0.00e+00	926.00
IUUC-Sha-106999	Sarcophilus harrisii	90.37	0.00e+00	931.00
IUUC-Sar-112988	Sorex araneus	85.52	0.00e+00	670.00
IUUC-Ssc-115384	Sus scrofa	95.61	0.00e+00	979.00
IUUC-Tgu-116808	Taeniopygia guttata	87.22	0.00e+00	893.00
IUUC-Tru-118233	Takifugu rubripes	71.30	0.00e+00	706.00
IUUC-Tsy-119509	Tarsius syrichta	81.97	7.00e-171	594.00
IUUC-Tni-120473	Tetraodon nigroviridis	66.96	0.00e+00	705.00
IUUC-Tbe-127447	Tupaia belangeri	73.29	2.00e-96	346.00
IUUC-Ttr-128459	Tursiops truncatus	92.09	0.00e+00	933.00
IUUC-Vpa-130258	Vicugna pacos	93.13	6.00e-130	458.00
IUUC-Xtr-132609	Xenopus tropicalis	71.78	0.00e+00	729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence