iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074898

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02000975

Gene Name

WDR47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000002993.3	ENSOCUT00000002993.3	ENSOCUP00000002602.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-29	100.5	824	860
UBD/Beta-Prp	2.20e-58	197.8	728	986

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  +s+++++sGs D+t++ WDlr   ++
   Q: 824  GHTGHILALYtWSGWMIASGSQDKTVRFWDLRVPSCV 860
           89999***966977*****************988887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  +  +++       ++s h+++++++ f +  +    il++++  D +i+  d + g
   Q: 728  NKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQRG 816
           68*****************************99999999889888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +l+l     g  ++sGs+d+t+r wdl+  +c++    t+ g+ ++v +v+v+p+g+ll++G  D+ ++l+d++ g+
   Q: 817  QGLHALSGHTGHILALYTWS-GWMIASGSQDKTVRFWDLRVPSCVRVvgtTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGR 904
           **************997777.9***********************99999*************************************** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++     h ++v+s+ f++   +l++gs+d ++k+ dlq    ++  ++ + +h+d v + r + +d  ++s s+D+++ +W
   Q: 905  MVQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQgdltKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 986
           *****98.********************************99977788*********************************** PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MADEEEDPTF EEENEEIGGG AEGGQGKRKR LFSKELRCMM YGFGDDQNPY TESVDILEDL 60
VIEFITEMAI NMTAEETVNV KEVEIIKLIL DFLNSKKLHI SMLALEKESG VINGLFSDDM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAAGTGA CGCAACGGAA GTAGTAAAAA CCCGCTGAGA GCGAGCCGGC GCGGCACAGT 60
AGGTTGTCGG GCTAGTGTAA TGGCAGATGA GGAAGAAGAT CCCACCGTGA GTGACCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR009072--Histone-fold
IPR006594--LisH
IPR003195--TFIID_TAF13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF02269--TFIID-18kDa
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	97.41	0.00e+00	1637.00
IUUC-Apl-003954	Anas platyrhynchos	91.87	0.00e+00	1555.00
IUUC-Aca-004766	Anolis carolinensis	89.26	0.00e+00	1494.00
IUUC-Ame-010725	Astyanax mexicanus	70.54	0.00e+00	1140.00
IUUC-Bta-013072	Bos taurus	95.87	0.00e+00	1592.00
IUUC-Cel-018667	Caenorhabditis elegans	48.33	2.00e-94	340.00
IUUC-Cja-018835	Callithrix jacchus	96.76	0.00e+00	1624.00
IUUC-Cfa-020380	Canis familiaris	95.60	0.00e+00	991.00
IUUC-Cpo-021883	Cavia porcellus	96.30	0.00e+00	1595.00
IUUC-Csa-023467	Chlorocebus sabaeus	97.71	0.00e+00	1644.00
IUUC-Cho-024342	Choloepus hoffmanni	87.95	0.00e+00	1480.00
IUUC-Cin-025112	Ciona intestinalis	43.08	5.00e-73	267.00
IUUC-Dre-027530	Danio rerio	76.55	0.00e+00	1251.00
IUUC-Dno-029290	Dasypus novemcinctus	97.61	0.00e+00	1635.00
IUUC-Dor-030258	Dipodomys ordii	83.39	0.00e+00	1363.00
IUUC-Dme-032040	Drosophila melanogaster	52.73	3.00e-103	368.00
IUUC-Ete-032248	Echinops telfairi	90.13	0.00e+00	767.00
IUUC-Eca-033623	Equus caballus	97.61	0.00e+00	1628.00
IUUC-Fca-036425	Felis catus	96.33	0.00e+00	1451.00
IUUC-Fal-036661	Ficedula albicollis	91.10	0.00e+00	1529.00
IUUC-Gmo-039527	Gadus morhua	73.85	0.00e+00	1222.00
IUUC-Gga-041177	Gallus gallus	90.87	0.00e+00	1527.00
IUUC-Gac-042049	Gasterosteus aculeatus	73.39	0.00e+00	1232.00
IUUC-Ggo-044833	Gorilla gorilla	96.87	0.00e+00	1634.00
IUUC-Hsa-046084	Homo sapiens	97.09	0.00e+00	1637.00
IUUC-Lch-050313	Latimeria chalumnae	80.84	0.00e+00	1395.00
IUUC-Loc-051790	Lepisosteus oculatus	81.90	0.00e+00	1400.00
IUUC-Laf-053521	Loxodonta africana	96.53	0.00e+00	1607.00
IUUC-Mcc-055053	Macaca mulatta	97.71	0.00e+00	1644.00
IUUC-Meu-056734	Macropus eugenii	93.55	0.00e+00	689.00
IUUC-Mga-059381	Meleagris gallopavo	91.32	0.00e+00	1536.00
IUUC-Mmr-060859	Microcebus murinus	97.41	0.00e+00	1638.00
IUUC-Mdo-062501	Monodelphis domestica	92.56	0.00e+00	1467.00
IUUC-Mmu-063126	Mus musculus	95.76	0.00e+00	1586.00
IUUC-Mpu-066718	Mustela putorius furo	97.62	0.00e+00	1286.00
IUUC-Mlu-067246	Myotis lucifugus	96.63	0.00e+00	1612.00
IUUC-Nle-069807	Nomascus leucogenys	96.98	0.00e+00	1634.00
IUUC-Opr-070862	Ochotona princeps	90.91	1.00e-71	265.00
IUUC-Ont-072519	Oreochromis niloticus	76.32	0.00e+00	1249.00
IUUC-Oan-072740	Ornithorhynchus anatinus	90.52	0.00e+00	790.00
IUUC-Ola-086396	Oryzias latipes	76.18	0.00e+00	1277.00
IUUC-Oga-088563	Otolemur garnettii	96.98	0.00e+00	1626.00
IUUC-Oar-089926	Ovis aries	97.50	0.00e+00	1637.00
IUUC-Ptr-090706	Pan troglodytes	96.98	0.00e+00	1637.00
IUUC-Pan-091740	Papio anubis	97.82	0.00e+00	1646.00
IUUC-Psi-093938	Pelodiscus sinensis	90.40	0.00e+00	1532.00
IUUC-Pfo-096531	Poecilia formosa	75.81	0.00e+00	1246.00
IUUC-Pab-098312	Pongo abelii	97.61	0.00e+00	1644.00
IUUC-Pca-101100	Procavia capensis	91.18	0.00e+00	735.00
IUUC-Pva-102734	Pteropus vampyrus	86.58	0.00e+00	1176.00
IUUC-Rno-105625	Rattus norvegicus	95.77	0.00e+00	1571.00
IUUC-Sha-106999	Sarcophilus harrisii	90.68	0.00e+00	1493.00
IUUC-Sar-112988	Sorex araneus	84.64	0.00e+00	1161.00
IUUC-Ssc-115384	Sus scrofa	97.17	0.00e+00	1615.00
IUUC-Tgu-116808	Taeniopygia guttata	90.90	0.00e+00	1512.00
IUUC-Tru-118233	Takifugu rubripes	75.84	0.00e+00	1225.00
IUUC-Tsy-119509	Tarsius syrichta	98.94	0.00e+00	679.00
IUUC-Tni-120473	Tetraodon nigroviridis	74.62	0.00e+00	1241.00
IUUC-Tbe-127447	Tupaia belangeri	90.74	3.00e-146	512.00
IUUC-Ttr-128459	Tursiops truncatus	94.35	0.00e+00	1504.00
IUUC-Vpa-130258	Vicugna pacos	91.76	0.00e+00	989.00
IUUC-Xtr-132609	Xenopus tropicalis	79.44	0.00e+00	1325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence