iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112812

Ensembl Protein ID

PGSC0003DMT400030810

UniProt Accession

M1AUU1; M1AUU1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400011805	PGSC0003DMT400030810	PGSC0003DMT400030810

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-07	32.3	12	37

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlrtg 33
           +f ++ ++++ +s+Dg ik+WD+ +g
   Q: 12   CFsPSlDFFAISSGDGRIKIWDTVKG 37
           57778899999***********8766 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGTANIRDIL TCFSPSLDFF AISSGDGRIK IWDTVKGQVQ TEFADIVSME TESLFNKPGG 60
HLSMDYTCMK WLSCDRKKKR KIGTSLLVLG TGSGDVLALD VSAGHLKWRF SDCHPGGVNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAACTTGA ATATTTTCTA ATTGAGCAAA ACCCCAAAAT TTTGAAGGTT TAGCCTTCTC 60
TGTAAGCCGC CCTGCCCCTT CGCTATTTCC CTCTTTTCAG CGCCACAGTC CGTTCAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

sot:102578394

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	24.34	2.00e-30	126.00
IUUC-Atr-002533	Amborella trichopoda	46.15	4.00e-138	483.00
IUUC-Apl-003242	Anas platyrhynchos	23.01	2.00e-16	79.30
IUUC-Aca-004607	Anolis carolinensis	25.00	1.00e-18	87.00
IUUC-Aly-006074	Arabidopsis lyrata	56.57	3.00e-157	547.00
IUUC-Ath-007222	Arabidopsis thaliana	57.59	2.00e-157	548.00
IUUC-Ame-011014	Astyanax mexicanus	24.79	2.00e-20	92.80
IUUC-Bta-012605	Bos taurus	24.55	2.00e-32	132.00
IUUC-Bdi-014072	Brachypodium distachyon	47.41	1.00e-141	495.00
IUUC-Bol-016255	Brassica oleracea	55.98	0.00e+00	634.00
IUUC-Bra-017484	Brassica rapa	56.08	4.00e-178	616.00
IUUC-Cja-019620	Callithrix jacchus	23.68	6.00e-30	124.00
IUUC-Cfa-020520	Canis familiaris	24.30	2.00e-30	125.00
IUUC-Cpo-022456	Cavia porcellus	23.28	9.00e-24	103.00
IUUC-Cho-024726	Choloepus hoffmanni	22.22	4.00e-25	108.00
IUUC-Cin-025761	Ciona intestinalis	23.02	2.00e-13	69.70
IUUC-Dre-028051	Danio rerio	27.91	1.00e-23	103.00
IUUC-Dno-030031	Dasypus novemcinctus	23.14	1.00e-28	120.00
IUUC-Dme-031653	Drosophila melanogaster	22.79	5.00e-18	85.10
IUUC-Eca-033243	Equus caballus	23.86	9.00e-24	103.00
IUUC-Eeu-034970	Erinaceus europaeus	23.57	2.00e-13	70.50
IUUC-Fca-036009	Felis catus	24.38	1.00e-31	130.00
IUUC-Fal-037264	Ficedula albicollis	22.74	9.00e-16	77.40
IUUC-Gmo-039124	Gadus morhua	26.85	5.00e-27	114.00
IUUC-Gga-040862	Gallus gallus	26.49	2.00e-23	103.00
IUUC-Gac-041468	Gasterosteus aculeatus	32.05	2.00e-26	112.00
IUUC-Gma-042795	Glycine max	55.00	1.00e-166	578.00
IUUC-Ggo-044432	Gorilla gorilla	23.80	7.00e-30	124.00
IUUC-Hsa-047036	Homo sapiens	23.34	2.00e-29	123.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	22.85	2.00e-28	119.00
IUUC-Lch-049553	Latimeria chalumnae	26.92	9.00e-23	100.00
IUUC-Laf-053462	Loxodonta africana	24.55	6.00e-30	124.00
IUUC-Mcc-055239	Macaca mulatta	23.63	3.00e-30	125.00
IUUC-Mtr-057977	Medicago truncatula	53.83	2.00e-166	578.00
IUUC-Mmr-061472	Microcebus murinus	23.64	1.00e-29	123.00
IUUC-Mdo-061972	Monodelphis domestica	22.75	3.00e-28	119.00
IUUC-Mmu-063354	Mus musculus	22.86	3.00e-26	112.00
IUUC-Mac-065064	Musa acuminata	57.71	2.00e-137	481.00
IUUC-Mpu-066877	Mustela putorius furo	24.14	8.00e-31	127.00
IUUC-Mlu-067476	Myotis lucifugus	23.71	2.00e-26	112.00
IUUC-Nle-069119	Nomascus leucogenys	23.76	1.00e-29	123.00
IUUC-Ont-072093	Oreochromis niloticus	25.42	5.00e-31	128.00
IUUC-Oan-072944	Ornithorhynchus anatinus	22.08	7.00e-20	90.90
IUUC-Ocu-074472	Oryctolagus cuniculus	23.44	2.00e-26	113.00
IUUC-Oba-075009	Oryza barthii	46.52	4.00e-131	460.00
IUUC-Ogl-077189	Oryza glaberrima	43.89	1.00e-128	452.00
IUUC-Oin-079064	Oryza indica	46.69	1.00e-131	462.00
IUUC-Opu-083604	Oryza punctata	46.36	1.00e-133	468.00
IUUC-Oru-084620	Oryza rufipogon	46.52	1.00e-130	459.00
IUUC-Osa-085345	Oryza sativa	46.69	2.00e-131	461.00
IUUC-Ola-086626	Oryzias latipes	25.43	4.00e-33	135.00
IUUC-Oga-087911	Otolemur garnettii	23.85	2.00e-28	119.00
IUUC-Ptr-091603	Pan troglodytes	23.34	2.00e-29	122.00
IUUC-Pan-092569	Papio anubis	23.63	3.00e-30	125.00
IUUC-Pma-094287	Petromyzon marinus	22.46	2.00e-26	112.00
IUUC-Ppa-095327	Physcomitrella patens	36.72	8.00e-67	247.00
IUUC-Pfo-097292	Poecilia formosa	29.84	1.00e-26	114.00
IUUC-Pab-097878	Pongo abelii	23.34	2.00e-29	123.00
IUUC-Pop-099418	Populus trichocarpa	58.04	9.00e-176	608.00
IUUC-Pca-100941	Procavia capensis	22.82	2.00e-19	89.70
IUUC-Ppe-101779	Prunus persica	59.16	0.00e+00	673.00
IUUC-Pva-102493	Pteropus vampyrus	30.10	6.00e-17	81.60
IUUC-Rno-105084	Rattus norvegicus	22.91	5.00e-26	111.00
IUUC-Sha-107486	Sarcophilus harrisii	22.37	1.00e-26	113.00
IUUC-Smo-108825	Selaginella moellendorffii	32.12	1.00e-66	246.00
IUUC-Sit-110825	Setaria italica	47.04	2.00e-141	494.00
IUUC-Sly-111365	Solanum lycopersicum	97.84	0.00e+00	1147.00
IUUC-Sar-113326	Sorex araneus	28.81	4.00e-20	92.00
IUUC-Sbi-114426	Sorghum bicolor	46.18	1.00e-145	509.00
IUUC-Tgu-116726	Taeniopygia guttata	23.54	4.00e-25	108.00
IUUC-Tru-117848	Takifugu rubripes	28.69	2.00e-27	116.00
IUUC-Tni-120591	Tetraodon nigroviridis	25.25	4.00e-28	118.00
IUUC-Tca-121576	Theobroma cacao	55.93	1.00e-177	614.00
IUUC-Tae-125648	Triticum aestivum	47.51	3.00e-144	504.00
IUUC-Tbe-127832	Tupaia belangeri	23.68	5.00e-22	98.20
IUUC-Ttr-128812	Tursiops truncatus	24.07	2.00e-24	106.00
IUUC-Xma-133557	Xiphophorus maculatus	30.62	2.00e-27	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence