iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121576

Ensembl Protein ID

EOY06607

UniProt Accession

A0A061EP37; A0A061EP37_THECC

Genbank Protein ID

EOY06606.1; EOY06607.1

Protein Name

Transducin family protein / WD-40 repeat family protein, putative isoform 1

Genbank Nucleotide ID

CM001882; CM001882

Gene Name

TCM_021275

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021275	EOY06608	EOY06608
TCM_021275	EOY06607	EOY06607

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-09	39.3	5	34

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtcl..af.sd.tllvsGsdDgtikvWDl 30
            ++++  af ++ ++++ +s+Dg ik+WD+
   Q: 5    NIRDIltAFsPSlDYFAISSGDGRIKIWDT 34
           57776557898899***************7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGSSNIRDIL TAFSPSLDYF AISSGDGRIK IWDTLKGQIQ TEFADFVSSE ATNIYPKAER 60
GHLSIDYKCM KWLSFDKKKK RKLASSLLIL GTGSGDLLAL DVSAGQLKWR VSDCHPGGVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGATCATT TTCTACCCTG TCCTAATCAA AGAAAATATT TAAAAGAAAC TCACCAAAAA 60
AGAAAATTTC TTAATAACCT TTATATGATA TAAATTTTAT TTAATAATTA TTTTGACAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	27.41	3.00e-22	99.40
IUUC-Atr-002533	Amborella trichopoda	45.41	3.00e-148	518.00
IUUC-Apl-003242	Anas platyrhynchos	21.66	3.00e-19	89.00
IUUC-Aca-004607	Anolis carolinensis	23.23	6.00e-23	102.00
IUUC-Aly-006074	Arabidopsis lyrata	61.50	0.00e+00	629.00
IUUC-Ath-007222	Arabidopsis thaliana	59.93	2.00e-179	621.00
IUUC-Ame-011014	Astyanax mexicanus	27.20	1.00e-17	84.30
IUUC-Bta-012605	Bos taurus	27.04	1.00e-21	97.40
IUUC-Bdi-014072	Brachypodium distachyon	49.40	4.00e-153	534.00
IUUC-Bol-016255	Brassica oleracea	60.77	0.00e+00	726.00
IUUC-Bra-017484	Brassica rapa	59.11	0.00e+00	705.00
IUUC-Cja-019620	Callithrix jacchus	27.51	1.00e-21	97.40
IUUC-Cfa-020520	Canis familiaris	21.85	1.00e-25	110.00
IUUC-Cpo-022456	Cavia porcellus	27.04	4.00e-21	95.90
IUUC-Cho-024726	Choloepus hoffmanni	26.37	1.00e-21	97.80
IUUC-Dre-028051	Danio rerio	30.15	7.00e-21	95.10
IUUC-Dno-030031	Dasypus novemcinctus	26.74	4.00e-21	95.90
IUUC-Dme-031653	Drosophila melanogaster	21.40	1.00e-17	84.30
IUUC-Eca-033243	Equus caballus	26.37	2.00e-13	69.70
IUUC-Fca-036009	Felis catus	27.04	3.00e-22	99.40
IUUC-Fal-037264	Ficedula albicollis	22.83	3.00e-18	85.90
IUUC-Gmo-039124	Gadus morhua	26.59	9.00e-22	97.80
IUUC-Gga-040862	Gallus gallus	27.68	2.00e-24	106.00
IUUC-Gac-041468	Gasterosteus aculeatus	28.73	6.00e-23	101.00
IUUC-Gma-042795	Glycine max	61.30	0.00e+00	661.00
IUUC-Ggo-044432	Gorilla gorilla	27.51	1.00e-21	97.40
IUUC-Hsa-047036	Homo sapiens	27.51	1.00e-21	97.40
IUUC-Hvu-047736	Hordeum vulgare	28.44	1.00e-25	109.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	26.02	9.00e-21	94.70
IUUC-Lch-049553	Latimeria chalumnae	27.06	4.00e-21	95.90
IUUC-Laf-053462	Loxodonta africana	21.60	5.00e-23	102.00
IUUC-Mcc-055239	Macaca mulatta	26.84	5.00e-21	95.50
IUUC-Mtr-057977	Medicago truncatula	59.57	0.00e+00	644.00
IUUC-Mga-060079	Meleagris gallopavo	24.44	1.00e-17	83.60
IUUC-Mmr-061472	Microcebus murinus	27.04	5.00e-21	95.50
IUUC-Mdo-061972	Monodelphis domestica	24.47	1.00e-22	100.00
IUUC-Mmu-063354	Mus musculus	27.24	2.00e-21	97.10
IUUC-Mac-065064	Musa acuminata	54.15	5.00e-140	489.00
IUUC-Mpu-066877	Mustela putorius furo	27.04	3.00e-22	99.40
IUUC-Mlu-067476	Myotis lucifugus	26.24	2.00e-19	90.10
IUUC-Nle-069119	Nomascus leucogenys	27.51	1.00e-21	97.40
IUUC-Ont-072093	Oreochromis niloticus	24.60	2.00e-26	113.00
IUUC-Oan-072944	Ornithorhynchus anatinus	20.21	2.00e-16	80.10
IUUC-Ocu-074472	Oryctolagus cuniculus	27.78	3.00e-20	92.80
IUUC-Oba-075009	Oryza barthii	48.03	3.00e-143	501.00
IUUC-Ogl-077189	Oryza glaberrima	45.32	4.00e-141	494.00
IUUC-Oin-079064	Oryza indica	48.19	6.00e-143	500.00
IUUC-Opu-083604	Oryza punctata	48.68	1.00e-145	509.00
IUUC-Oru-084620	Oryza rufipogon	48.19	9.00e-144	503.00
IUUC-Osa-085345	Oryza sativa	48.36	5.00e-144	503.00
IUUC-Ola-086626	Oryzias latipes	23.53	1.00e-25	110.00
IUUC-Oga-087911	Otolemur garnettii	21.32	2.00e-24	106.00
IUUC-Ptr-091603	Pan troglodytes	27.51	1.00e-21	97.40
IUUC-Pan-092569	Papio anubis	26.84	5.00e-21	95.50
IUUC-Pma-094287	Petromyzon marinus	23.08	2.00e-21	96.70
IUUC-Ppa-095327	Physcomitrella patens	33.39	4.00e-82	298.00
IUUC-Pfo-097292	Poecilia formosa	26.67	2.00e-23	103.00
IUUC-Pab-097878	Pongo abelii	27.21	1.00e-21	97.40
IUUC-Pop-099418	Populus trichocarpa	67.12	0.00e+00	731.00
IUUC-Pca-100941	Procavia capensis	29.13	4.00e-18	85.90
IUUC-Ppe-101779	Prunus persica	68.28	0.00e+00	800.00
IUUC-Pva-102493	Pteropus vampyrus	27.75	5.00e-16	79.00
IUUC-Rno-105084	Rattus norvegicus	27.24	5.00e-21	95.50
IUUC-Sha-107486	Sarcophilus harrisii	24.66	4.00e-22	99.00
IUUC-Smo-108825	Selaginella moellendorffii	33.85	3.00e-75	275.00
IUUC-Sit-110825	Setaria italica	50.85	2.00e-159	555.00
IUUC-Sly-111365	Solanum lycopersicum	56.08	1.00e-179	622.00
IUUC-Stu-112812	Solanum tuberosum	55.85	4.00e-178	617.00
IUUC-Sar-113326	Sorex araneus	27.46	3.00e-20	92.40
IUUC-Sbi-114426	Sorghum bicolor	50.08	7.00e-166	576.00
IUUC-Tgu-116726	Taeniopygia guttata	23.62	2.00e-25	110.00
IUUC-Tru-117848	Takifugu rubripes	28.52	5.00e-23	102.00
IUUC-Tni-120591	Tetraodon nigroviridis	28.24	2.00e-23	103.00
IUUC-Tae-125648	Triticum aestivum	50.25	6.00e-157	546.00
IUUC-Tbe-127832	Tupaia belangeri	27.92	2.00e-15	76.30
IUUC-Ttr-128812	Tursiops truncatus	22.04	8.00e-18	84.70
IUUC-Xma-133557	Xiphophorus maculatus	27.22	1.00e-24	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence