iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098800

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_834696; POPTR_0014s01640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s01640	POPTR_0014s01640.1	POPTR_0014s01640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-26	92.5	191	227
UBD/Beta-Prp	5.60e-41	141.8	35	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gH d+v  +++  s+ + lv+G+ Dg i+ WD+r+  
   Q: 191  GHRDGVMTVEWstSSeWVLVTGGCDGAIRFWDIRRAG 227
           8***********955699**************98765 PP

UBD/Beta-Prp

   S: 39   vttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...............tgkcvhtlk.....ghedsvlslsfsp.sgd 107
           +++      +s h + +++++ + ++  +l++g++D+ + v+d++               + k ++t+      gh++ + s  ++p ++ 
   Q: 35   YKD-----VVSPHRGSINSLQVDLTEGrYLLSGASDASASVFDIQhatdfegggegaliaKHKSLITIDkqhqnGHKFAISSAIWYPiDTG 120
           333.....45778888888888866555888888888888888888888888888888887777777777777788888888888886668 PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelv 196
            +v+Gs d +i+vwd+++ q + +++ + +   + ++   ++  l+++G+ D +vrl d+++g   +tl+g h d v  ++++ ++   lv
   Q: 121  LFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATShMLIAAGTEDVQVRLCDIASGAFAHTLSG-HRDGVMTVEWSTSSeWVLV 210
           88888888888888888888886433333333333333444457888888888888888888888888887.8888888887777745678 PP
   S: 197  sgsldgtvklwdlqtgecvr 216
           +g++dg +++wd+++  c  
   Q: 211  TGGCDGAIRFWDIRRAGCFL 230
           88888888888888777743 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MWREIRDREA GKTRPNSFKN RVSSSRISNL QLSNYKDVVS PHRGSINSLQ VDLTEGRYLL 60
SGASDASASV FDIQHATDFE GGGEGALIAK HKSLITIDKQ HQNGHKFAIS SAIWYPIDTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAAACAAC TTGGACAACC AACAGTTAGG AGTAATATTC TGTCCCCCTC TTTGCAACTG 60
GGACTTTAAT TTTTTCGAAG ATTCAACTAA ATTATAAAGC AAGAAGCTTC GAAGGTAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s01640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	66.67	1.00e-56	214.00
IUUC-Aml-002201	Ailuropoda melanoleuca	36.84	1.00e-45	176.00
IUUC-Atr-002784	Amborella trichopoda	63.82	1.00e-174	605.00
IUUC-Apl-003202	Anas platyrhynchos	32.27	2.00e-68	251.00
IUUC-Aca-004708	Anolis carolinensis	29.21	3.00e-55	208.00
IUUC-Aly-006144	Arabidopsis lyrata	69.98	0.00e+00	659.00
IUUC-Ath-006673	Arabidopsis thaliana	69.38	0.00e+00	639.00
IUUC-Acl-008195	Aspergillus clavatus	27.93	6.00e-28	118.00
IUUC-Afl-008406	Aspergillus flavus	29.14	1.00e-24	106.00
IUUC-Afu-008759	Aspergillus fumigatus	28.62	1.00e-26	114.00
IUUC-Ani-009380	Aspergillus nidulans	29.20	6.00e-28	118.00
IUUC-Ang-009820	Aspergillus niger	28.05	3.00e-24	105.00
IUUC-Aor-010092	Aspergillus oryzae	29.66	1.00e-30	127.00
IUUC-Ate-010491	Aspergillus terreus	28.48	3.00e-29	122.00
IUUC-Bta-012825	Bos taurus	26.96	3.00e-47	181.00
IUUC-Bci-013856	Botrytis cinerea	28.65	1.00e-38	153.00
IUUC-Bdi-014899	Brachypodium distachyon	61.74	3.00e-165	574.00
IUUC-Bol-015337	Brassica oleracea	68.20	0.00e+00	631.00
IUUC-Bra-018089	Brassica rapa	68.64	0.00e+00	635.00
IUUC-Cja-018725	Callithrix jacchus	36.21	1.00e-46	179.00
IUUC-Cfa-021162	Canis familiaris	36.84	7.00e-46	177.00
IUUC-Cpo-022190	Cavia porcellus	36.40	5.00e-46	177.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	35.99	3.00e-71	261.00
IUUC-Csa-023610	Chlorocebus sabaeus	36.40	2.00e-45	175.00
IUUC-Cho-024689	Choloepus hoffmanni	27.55	9.00e-44	170.00
IUUC-Cin-025324	Ciona intestinalis	29.53	6.00e-46	177.00
IUUC-Csv-026059	Ciona savignyi	26.93	4.00e-35	141.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	29.70	1.00e-25	110.00
IUUC-Cme-027182	Cyanidioschyzon merolae	31.29	6.00e-17	82.00
IUUC-Dre-028696	Danio rerio	31.18	9.00e-64	236.00
IUUC-Dno-029102	Dasypus novemcinctus	35.96	2.00e-45	175.00
IUUC-Dor-030361	Dipodomys ordii	30.88	5.00e-28	117.00
IUUC-Dse-031167	Dothistroma septosporum	30.19	4.00e-34	138.00
IUUC-Ete-032856	Echinops telfairi	29.41	3.00e-28	118.00
IUUC-Eca-033611	Equus caballus	29.26	3.00e-52	198.00
IUUC-Eeu-034583	Erinaceus europaeus	45.05	1.00e-20	93.60
IUUC-Fca-036481	Felis catus	35.53	9.00e-45	173.00
IUUC-Fal-037327	Ficedula albicollis	34.16	9.00e-64	236.00
IUUC-Fox-037684	Fusarium oxysporum	30.69	1.00e-32	134.00
IUUC-Fso-038306	Fusarium solani	27.03	8.00e-33	134.00
IUUC-Gmo-039043	Gadus morhua	31.05	4.00e-61	228.00
IUUC-Ggr-039783	Gaeumannomyces graminis	28.45	8.00e-28	117.00
IUUC-Gga-041085	Gallus gallus	31.31	8.00e-62	230.00
IUUC-Gac-042328	Gasterosteus aculeatus	36.84	1.00e-44	173.00
IUUC-Gma-042916	Glycine max	73.94	0.00e+00	667.00
IUUC-Ggo-045627	Gorilla gorilla	34.63	4.00e-37	148.00
IUUC-Hsa-046028	Homo sapiens	36.40	2.00e-45	175.00
IUUC-Hvu-047678	Hordeum vulgare	62.78	3.00e-109	387.00
IUUC-Itr-048648	Ictidomys tridecemlineatus	30.18	2.00e-63	235.00
IUUC-Kpa-049386	Komagataella pastoris	29.08	6.00e-33	134.00
IUUC-Lch-050590	Latimeria chalumnae	31.78	1.00e-54	206.00
IUUC-Lpe-051725	Leersia perrieri	49.63	2.00e-101	361.00
IUUC-Loc-051788	Lepisosteus oculatus	33.26	2.00e-69	255.00
IUUC-Lma-053082	Leptosphaeria maculans	29.45	6.00e-45	174.00
IUUC-Laf-053809	Loxodonta africana	37.28	3.00e-46	178.00
IUUC-Mcc-054998	Macaca mulatta	36.40	2.00e-45	176.00
IUUC-Meu-055929	Macropus eugenii	33.85	6.00e-62	230.00
IUUC-Mor-057003	Magnaporthe oryzae	30.84	5.00e-36	145.00
IUUC-Mtr-057921	Medicago truncatula	72.22	0.00e+00	651.00
IUUC-Mga-059449	Meleagris gallopavo	37.79	3.00e-33	134.00
IUUC-Mmr-061609	Microcebus murinus	33.77	6.00e-40	157.00
IUUC-Mdo-062564	Monodelphis domestica	33.11	4.00e-72	264.00
IUUC-Mmu-063904	Mus musculus	36.84	1.00e-45	176.00
IUUC-Mac-064716	Musa acuminata	64.57	2.00e-173	601.00
IUUC-Mpu-066617	Mustela putorius furo	36.84	1.00e-45	176.00
IUUC-Mlu-067054	Myotis lucifugus	28.01	5.00e-48	184.00
IUUC-Nfi-068467	Neosartorya fischeri	27.39	3.00e-20	92.00
IUUC-Nle-069731	Nomascus leucogenys	36.40	2.00e-45	175.00
IUUC-Opr-070297	Ochotona princeps	25.88	2.00e-17	82.80
IUUC-Ont-072558	Oreochromis niloticus	30.42	1.00e-54	206.00
IUUC-Oan-072864	Ornithorhynchus anatinus	52.63	8.00e-15	70.90
IUUC-Ocu-074415	Oryctolagus cuniculus	35.78	2.00e-45	175.00
IUUC-Oba-075759	Oryza barthii	64.00	7.00e-158	550.00
IUUC-Obr-076387	Oryza brachyantha	63.19	3.00e-159	553.00
IUUC-Ogl-077924	Oryza glaberrima	70.21	6.00e-54	202.00
IUUC-Ogu-078186	Oryza glumaepatula	58.39	2.00e-145	508.00
IUUC-Oin-079389	Oryza indica	46.38	3.00e-59	221.00
IUUC-Olo-080916	Oryza longistaminata	72.31	5.00e-27	113.00
IUUC-Ome-081471	Oryza meridionalis	63.74	3.00e-122	431.00
IUUC-Oni-082449	Oryza nivara	65.24	1.00e-151	528.00
IUUC-Opu-083210	Oryza punctata	65.01	2.00e-161	561.00
IUUC-Oru-085159	Oryza rufipogon	64.07	1.00e-157	548.00
IUUC-Osa-085926	Oryza sativa	68.99	4.00e-67	246.00
IUUC-Ola-087084	Oryzias latipes	31.90	7.00e-69	253.00
IUUC-Olu-087853	Ostreococcus lucimarinus	35.31	5.00e-59	221.00
IUUC-Oga-089008	Otolemur garnettii	30.80	2.00e-61	229.00
IUUC-Oar-089259	Ovis aries	36.84	1.00e-45	176.00
IUUC-Ptr-091112	Pan troglodytes	36.40	3.00e-45	175.00
IUUC-Pan-092303	Papio anubis	34.43	1.00e-17	81.30
IUUC-Psi-093050	Pelodiscus sinensis	33.33	4.00e-69	254.00
IUUC-Pma-094259	Petromyzon marinus	29.06	4.00e-41	161.00
IUUC-Pno-094798	Phaeosphaeria nodorum	27.62	2.00e-43	169.00
IUUC-Ppa-095477	Physcomitrella patens	49.89	1.00e-136	479.00
IUUC-Pfo-096855	Poecilia formosa	31.81	2.00e-67	249.00
IUUC-Pab-098096	Pongo abelii	29.73	3.00e-61	228.00
IUUC-Pca-100187	Procavia capensis	34.95	5.00e-37	147.00
IUUC-Ppe-101759	Prunus persica	79.87	0.00e+00	739.00
IUUC-Pva-102438	Pteropus vampyrus	37.66	1.00e-30	126.00
IUUC-Pte-104197	Pyrenophora teres	29.51	2.00e-44	172.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	31.02	1.00e-39	157.00
IUUC-Rno-106087	Rattus norvegicus	36.84	2.00e-45	176.00
IUUC-Sha-106831	Sarcophilus harrisii	31.24	2.00e-68	251.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	31.56	3.00e-39	155.00
IUUC-Spo-108294	Schizosaccharomyces pombe	29.72	2.00e-43	169.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	27.93	5.00e-40	158.00
IUUC-Smo-109008	Selaginella moellendorffii	46.59	1.00e-121	429.00
IUUC-Sit-110300	Setaria italica	64.62	4.00e-159	553.00
IUUC-Sly-111441	Solanum lycopersicum	70.24	0.00e+00	639.00
IUUC-Stu-111995	Solanum tuberosum	71.55	0.00e+00	647.00
IUUC-Sar-113196	Sorex araneus	25.49	7.00e-26	110.00
IUUC-Sbi-113790	Sorghum bicolor	64.69	2.00e-158	551.00
IUUC-Ssc-115609	Sus scrofa	27.54	1.00e-47	183.00
IUUC-Tgu-116927	Taeniopygia guttata	32.75	1.00e-67	249.00
IUUC-Tru-118164	Takifugu rubripes	32.56	4.00e-61	228.00
IUUC-Tsy-119151	Tarsius syrichta	32.02	8.00e-36	144.00
IUUC-Tni-120896	Tetraodon nigroviridis	37.28	3.00e-44	171.00
IUUC-Tca-121592	Theobroma cacao	78.63	0.00e+00	740.00
IUUC-Tre-122023	Trichoderma reesei	32.59	4.00e-34	138.00
IUUC-Tvi-122507	Trichoderma virens	27.76	2.00e-33	136.00
IUUC-Tae-125276	Triticum aestivum	63.92	6.00e-157	546.00
IUUC-Tur-126092	Triticum urartu	52.75	4.00e-51	194.00
IUUC-Tbe-127422	Tupaia belangeri	30.62	3.00e-26	112.00
IUUC-Ttr-129097	Tursiops truncatus	27.53	4.00e-46	177.00
IUUC-Vda-130014	Verticillium dahliae	29.46	5.00e-31	128.00
IUUC-Vpa-130782	Vicugna pacos	36.40	1.00e-44	173.00
IUUC-Vvi-131494	Vitis vinifera	74.84	0.00e+00	722.00
IUUC-Xtr-132165	Xenopus tropicalis	31.86	3.00e-66	244.00
IUUC-Xma-133205	Xiphophorus maculatus	32.10	2.00e-69	255.00
IUUC-Yli-134614	Yarrowia lipolytica	29.22	3.00e-44	172.00
IUUC-Zma-135861	Zea mays	64.62	1.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence