iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002303

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01072527

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000006853.1	ENSAMET00000007539.1	ENSAMEP00000007234.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.10e-66	223.0	6	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 48   ellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkk 136
           ++++++q  +++ +++   +++p  +++ ++++a++f+  +q+Da+Efl++ +d++++++                  l+ +++ + ++
   Q: 6    CMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHT 76
           7899********************************************************..................33445677899 PP
   S: 137  knkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkk 225
           + ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++  +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++
   Q: 77   QATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHR 160
           99******************************************.....9*************************************** PP
   S: 226  lPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDsk 313
            ++vL+l LkRf    ++    ki k v++p+ Ld++p++++p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds 
   Q: 161  SSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQPNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSI 242
           ************....668889********************9977...8*************************************** PP
   S: 314  VtevkeeevleetgstaYvlfYkr 337
           V++++  +vl+   ++aYvlfY r
   Q: 243  VSTSDIRSVLS---QQAYVLFYIR 263
           ***********...********87 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

HAEGFCMMCT MQAHITQALS NPGDVIKPMF VINEMRRIAR HFRFGNQEDA HEFLQYTVDA 60
MQKACLNGSN KLDRHTQATT LVCQIFGGYL RSRVKCLNCK GVSDTFDPYL DITLEIKAAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATGCAGAAG GATTTTGTAT GATGTGTACA ATGCAAGCAC ATATCACCCA GGCACTCAGT 60
AATCCTGGGG ATGTTATTAA GCCGATGTTT GTCATTAATG AGATGCGGCG TAAGTATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003459	Anas platyrhynchos	42.56	0.00e+00	651.00
IUUC-Aca-004440	Anolis carolinensis	51.36	0.00e+00	827.00
IUUC-Bta-012803	Bos taurus	74.41	0.00e+00	1511.00
IUUC-Cja-019199	Callithrix jacchus	72.11	0.00e+00	1376.00
IUUC-Cfa-020597	Canis familiaris	88.65	0.00e+00	1819.00
IUUC-Cpo-021945	Cavia porcellus	71.31	0.00e+00	1464.00
IUUC-Csa-023485	Chlorocebus sabaeus	73.41	0.00e+00	1347.00
IUUC-Cho-024575	Choloepus hoffmanni	67.83	0.00e+00	1343.00
IUUC-Dno-029673	Dasypus novemcinctus	75.92	0.00e+00	1611.00
IUUC-Dor-030518	Dipodomys ordii	64.83	2.00e-124	440.00
IUUC-Ete-033088	Echinops telfairi	57.49	0.00e+00	857.00
IUUC-Eca-033579	Equus caballus	78.46	0.00e+00	1602.00
IUUC-Eeu-034511	Erinaceus europaeus	56.72	0.00e+00	1004.00
IUUC-Fca-035792	Felis catus	82.70	0.00e+00	1566.00
IUUC-Fal-037075	Ficedula albicollis	43.35	0.00e+00	720.00
IUUC-Gga-040504	Gallus gallus	43.66	0.00e+00	704.00
IUUC-Ggo-044798	Gorilla gorilla	71.32	0.00e+00	1245.00
IUUC-Hsa-046072	Homo sapiens	72.57	0.00e+00	1331.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	77.54	0.00e+00	1653.00
IUUC-Lch-049867	Latimeria chalumnae	69.59	0.00e+00	743.00
IUUC-Lpe-051385	Leersia perrieri	42.32	7.00e-58	219.00
IUUC-Laf-054330	Loxodonta africana	91.11	0.00e+00	1019.00
IUUC-Mcc-054900	Macaca mulatta	96.19	0.00e+00	771.00
IUUC-Meu-056877	Macropus eugenii	53.76	0.00e+00	747.00
IUUC-Mga-059501	Meleagris gallopavo	41.39	0.00e+00	675.00
IUUC-Mmr-060864	Microcebus murinus	77.14	0.00e+00	1602.00
IUUC-Mdo-062395	Monodelphis domestica	62.70	0.00e+00	1326.00
IUUC-Mmu-064236	Mus musculus	65.22	0.00e+00	1301.00
IUUC-Mpu-065822	Mustela putorius furo	89.83	0.00e+00	1830.00
IUUC-Mlu-067091	Myotis lucifugus	75.85	0.00e+00	1479.00
IUUC-Nle-069004	Nomascus leucogenys	71.81	0.00e+00	1359.00
IUUC-Opr-071170	Ochotona princeps	61.31	0.00e+00	1102.00
IUUC-Oan-073711	Ornithorhynchus anatinus	58.63	0.00e+00	1183.00
IUUC-Ocu-074596	Oryctolagus cuniculus	94.83	0.00e+00	748.00
IUUC-Oga-088641	Otolemur garnettii	76.66	0.00e+00	1596.00
IUUC-Oar-089760	Ovis aries	69.96	0.00e+00	1381.00
IUUC-Ptr-091445	Pan troglodytes	72.73	0.00e+00	1353.00
IUUC-Pan-092484	Papio anubis	72.23	0.00e+00	1279.00
IUUC-Psi-093277	Pelodiscus sinensis	53.92	0.00e+00	945.00
IUUC-Pab-097794	Pongo abelii	73.18	0.00e+00	1333.00
IUUC-Pva-103238	Pteropus vampyrus	70.98	0.00e+00	1342.00
IUUC-Rno-105068	Rattus norvegicus	65.42	0.00e+00	1316.00
IUUC-Sha-106713	Sarcophilus harrisii	63.33	0.00e+00	1344.00
IUUC-Sar-113340	Sorex araneus	81.16	0.00e+00	845.00
IUUC-Tgu-117149	Taeniopygia guttata	43.76	0.00e+00	722.00
IUUC-Tsy-118974	Tarsius syrichta	74.06	0.00e+00	1537.00
IUUC-Tbe-128006	Tupaia belangeri	70.70	6.00e-153	535.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence