iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111322

Ensembl Protein ID

Solyc10g007260.2.1

UniProt Accession

K4CXQ6; K4CXQ6_SOLLC

Genbank Protein ID

AHA42250.1

Protein Name

Ubc13-type ubiquitin-conjugating enzyme 2

Genbank Nucleotide ID

KF496882

Gene Name

Ubc13-2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g007260.2	Solyc10g007260.2.1	Solyc10g007260.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.30e-48	165.0	9	142

Active Site

Position(s)	Description	Evidence
89	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ ke+++l ++p +gisa+p++e ++  ++v+ilGp+++pYeggvFkle+ +pe+YP+ +Pkv+fltki+hPn+++ G++Cl+ilk  +k
   Q: 9    RIIKETQRLLSEPAPGISASPSEE-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK--DK 96
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           Wspal++++vllsiq+ll+ pnp++pl e++a+++k+n++e  +++
   Q: 97   WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETA 142
           **************************************99877666 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL 60
PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCGAACCC TATTAAGCAC AACTTTTTAG TGAGAGAAAC AGTGCTTCTA AAACTCCCAA 60
TCCATTTTTC TACTTTCTCT CTCTAGAAAA AGTGCGTTTT AGCTTAAATT TTCTGCGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006301--P:postreplication repair
GO:0070534--P:protein K63-linked ubiquitination

KEGG

sly:101262054

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000100	Aegilops tauschii	94.12	8.00e-84	301.00
IUUC-Aml-001889	Ailuropoda melanoleuca	78.72	9.00e-67	244.00
IUUC-Atr-002818	Amborella trichopoda	96.71	1.00e-85	307.00
IUUC-Apl-003469	Anas platyrhynchos	78.87	4.00e-68	249.00
IUUC-Aca-005051	Anolis carolinensis	80.27	1.00e-70	257.00
IUUC-Aly-005804	Arabidopsis lyrata	100.00	9.00e-88	314.00
IUUC-Ani-009482	Aspergillus nidulans	70.75	5.00e-64	235.00
IUUC-Ame-010742	Astyanax mexicanus	79.73	1.00e-70	257.00
IUUC-Bta-012636	Bos taurus	80.27	1.00e-70	257.00
IUUC-Bdi-014811	Brachypodium distachyon	98.69	8.00e-87	311.00
IUUC-Bol-016613	Brassica oleracea	100.00	9.00e-88	314.00
IUUC-Bra-016938	Brassica rapa	100.00	9.00e-88	314.00
IUUC-Cel-018119	Caenorhabditis elegans	79.19	1.00e-69	254.00
IUUC-Cja-019108	Callithrix jacchus	80.27	1.00e-70	257.00
IUUC-Cfa-021195	Canis familiaris	80.27	5.00e-70	255.00
IUUC-Cpo-022280	Cavia porcellus	76.87	1.00e-67	247.00
IUUC-Cre-022978	Chlamydomonas reinhardtii	86.58	2.00e-76	276.00
IUUC-Csa-023860	Chlorocebus sabaeus	73.47	1.00e-63	234.00
IUUC-Cho-024459	Choloepus hoffmanni	80.27	1.00e-70	257.00
IUUC-Csv-025952	Ciona savignyi	70.95	7.00e-59	218.00
IUUC-Cme-027100	Cyanidioschyzon merolae	66.22	4.00e-57	212.00
IUUC-Dre-027931	Danio rerio	80.41	8.00e-71	258.00
IUUC-Dno-030059	Dasypus novemcinctus	78.91	3.00e-69	252.00
IUUC-Dor-030269	Dipodomys ordii	80.62	8.00e-62	227.00
IUUC-Dme-032097	Drosophila melanogaster	76.19	2.00e-67	247.00
IUUC-Ete-032369	Echinops telfairi	80.27	1.00e-70	257.00
IUUC-Eca-033230	Equus caballus	80.27	1.00e-70	257.00
IUUC-Fca-036161	Felis catus	78.23	4.00e-68	249.00
IUUC-Fal-036781	Ficedula albicollis	77.55	3.00e-68	249.00
IUUC-Gga-041024	Gallus gallus	80.27	1.00e-70	257.00
IUUC-Gma-043982	Glycine max	99.35	2.00e-87	313.00
IUUC-Ggo-044660	Gorilla gorilla	79.59	5.00e-70	255.00
IUUC-Hsa-045881	Homo sapiens	80.27	1.00e-70	257.00
IUUC-Hvu-047346	Hordeum vulgare	99.35	3.00e-87	312.00
IUUC-Itr-048096	Ictidomys tridecemlineatus	73.47	1.00e-62	231.00
IUUC-Lch-050548	Latimeria chalumnae	79.86	1.00e-66	244.00
IUUC-Lpe-051394	Leersia perrieri	98.04	1.00e-86	310.00
IUUC-Loc-052205	Lepisosteus oculatus	79.73	1.00e-70	257.00
IUUC-Lma-053056	Leptosphaeria maculans	71.92	1.00e-64	237.00
IUUC-Laf-053540	Loxodonta africana	80.43	2.00e-66	243.00
IUUC-Mcc-054863	Macaca mulatta	80.27	1.00e-70	257.00
IUUC-Meu-056482	Macropus eugenii	80.43	2.00e-66	243.00
IUUC-Mtr-058552	Medicago truncatula	89.82	2.00e-83	300.00
IUUC-Mla-058920	Melampsora laricipopulina	69.13	4.00e-63	232.00
IUUC-Mga-059649	Meleagris gallopavo	77.40	2.00e-67	246.00
IUUC-Mmr-061167	Microcebus murinus	80.27	1.00e-70	257.00
IUUC-Mdo-062701	Monodelphis domestica	80.27	1.00e-70	257.00
IUUC-Mmu-064070	Mus musculus	80.27	1.00e-70	257.00
IUUC-Mpu-066401	Mustela putorius furo	80.27	1.00e-70	257.00
IUUC-Mlu-067229	Myotis lucifugus	79.72	9.00e-68	248.00
IUUC-Nle-070146	Nomascus leucogenys	80.27	1.00e-70	257.00
IUUC-Opr-070232	Ochotona princeps	65.31	6.00e-53	198.00
IUUC-Ont-072369	Oreochromis niloticus	79.73	3.00e-70	256.00
IUUC-Oan-073174	Ornithorhynchus anatinus	79.17	6.00e-68	248.00
IUUC-Ocu-074712	Oryctolagus cuniculus	80.27	1.00e-70	257.00
IUUC-Oba-075408	Oryza barthii	98.04	1.00e-86	310.00
IUUC-Obr-076881	Oryza brachyantha	98.04	1.00e-86	310.00
IUUC-Ogl-077242	Oryza glaberrima	98.04	1.00e-86	310.00
IUUC-Ogu-078465	Oryza glumaepatula	98.04	1.00e-86	310.00
IUUC-Oin-080035	Oryza indica	97.87	2.00e-79	286.00
IUUC-Olo-080555	Oryza longistaminata	98.04	1.00e-86	310.00
IUUC-Ome-081653	Oryza meridionalis	98.04	1.00e-86	310.00
IUUC-Oni-082400	Oryza nivara	98.04	1.00e-86	310.00
IUUC-Opu-083130	Oryza punctata	97.18	1.00e-78	285.00
IUUC-Oru-084649	Oryza rufipogon	98.04	1.00e-86	310.00
IUUC-Osa-085629	Oryza sativa	98.04	1.00e-86	310.00
IUUC-Ola-087083	Oryzias latipes	80.41	2.00e-70	256.00
IUUC-Olu-087886	Ostreococcus lucimarinus	68.71	7.00e-60	221.00
IUUC-Oga-088983	Otolemur garnettii	76.19	4.00e-67	245.00
IUUC-Oar-090440	Ovis aries	79.59	5.00e-70	255.00
IUUC-Ptr-090572	Pan troglodytes	80.27	1.00e-70	257.00
IUUC-Pan-092503	Papio anubis	78.23	6.00e-69	251.00
IUUC-Psi-093419	Pelodiscus sinensis	79.55	6.00e-63	231.00
IUUC-Ppa-096014	Physcomitrella patens	95.39	1.00e-84	304.00
IUUC-Pfo-096074	Poecilia formosa	81.76	3.00e-71	259.00
IUUC-Pab-097778	Pongo abelii	80.27	1.00e-70	257.00
IUUC-Pca-100334	Procavia capensis	67.35	2.00e-58	217.00
IUUC-Pva-102979	Pteropus vampyrus	80.27	1.00e-70	257.00
IUUC-Ptt-103752	Puccinia triticina	69.44	5.00e-60	222.00
IUUC-Rno-105927	Rattus norvegicus	80.95	7.00e-71	258.00
IUUC-Sha-107493	Sarcophilus harrisii	80.27	1.00e-70	257.00
IUUC-Sja-107878	Schizosaccharomyces japonicus	68.24	4.00e-59	219.00
IUUC-Sit-110069	Setaria italica	98.04	1.00e-86	310.00
IUUC-Stu-112722	Solanum tuberosum	99.35	3.00e-87	312.00
IUUC-Sar-113464	Sorex araneus	80.43	2.00e-66	243.00
IUUC-Sbi-114278	Sorghum bicolor	97.39	5.00e-86	308.00
IUUC-Ssc-116096	Sus scrofa	80.27	1.00e-70	257.00
IUUC-Tgu-117266	Taeniopygia guttata	80.43	2.00e-66	243.00
IUUC-Tru-117903	Takifugu rubripes	78.38	4.00e-70	255.00
IUUC-Tsy-118952	Tarsius syrichta	80.43	2.00e-66	243.00
IUUC-Tni-120038	Tetraodon nigroviridis	78.38	4.00e-70	255.00
IUUC-Tca-121752	Theobroma cacao	96.53	1.00e-79	288.00
IUUC-Tae-125309	Triticum aestivum	99.35	3.00e-87	312.00
IUUC-Tur-126687	Triticum urartu	95.14	1.00e-78	284.00
IUUC-Tbe-127846	Tupaia belangeri	80.43	2.00e-66	243.00
IUUC-Ttr-128808	Tursiops truncatus	79.45	2.00e-68	249.00
IUUC-Vpa-130221	Vicugna pacos	71.74	8.00e-56	207.00
IUUC-Vvi-131416	Vitis vinifera	83.15	4.00e-83	299.00
IUUC-Xtr-132366	Xenopus tropicalis	78.52	1.00e-68	250.00
IUUC-Xma-132986	Xiphophorus maculatus	81.08	1.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence