iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024203

Ensembl Protein ID

ENSCSAP00000001800.1

UniProt Accession

A0A0D9QZL1; A0A0D9QZL1_CHLSB

Genbank Protein ID

ENSCSAP00000001800

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01084148

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000005489.1	ENSCSAT00000003528.1	ENSCSAP00000001800.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	97.12	0.00e+00	1828.00	IUUC-Hsa-045964
E3 activity/RING/RING	88.05	0.00e+00	1674.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MAAAFPPTLG LSSAPDEIQH PHIKFSEWKF KLFRVRSFEK TPDEAQREKK DSFEGKPSLE 60
QSPAVLDKAD SQKPVPNQPV LKVHPKFSKK FHDSGKARVK AIHQANLRHL CRICGNSFKT 120

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Nucleotide Sequence
(Fasta)

CTCACACATC GTTCTACACT CAGGCCTCCT CTGAGCTAAG CTTCCTAAAG AACCAGGTGG 60
CAGCTGGAGC TGGGGTCTCC TGGCTTGTGA TTGGCTGCCA TCATTTGTGG TTAGCCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF00097--zf-C3HC4
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0002250--P:adaptive immune response
GO:0010390--P:histone monoubiquitination
GO:0043154--P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0070244--P:negative regulation of thymocyte apoptotic process
GO:0045582--P:positive regulation of T cell differentiation
GO:0002331--P:pre-B cell allelic exclusion
GO:0051865--P:protein autoubiquitination
GO:0033077--P:T cell differentiation in thymus
GO:0043029--P:T cell homeostasis
GO:0048538--P:thymus development
GO:0033151--P:V(D)J recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	91.04	0.00e+00	1720.00
IUUC-Apl-003271	Anas platyrhynchos	75.48	0.00e+00	1455.00
IUUC-Aca-004400	Anolis carolinensis	73.33	0.00e+00	1429.00
IUUC-Ame-011295	Astyanax mexicanus	56.63	0.00e+00	1047.00
IUUC-Bta-012421	Bos taurus	90.29	0.00e+00	1747.00
IUUC-Cja-019891	Callithrix jacchus	94.77	0.00e+00	1754.00
IUUC-Cfa-020740	Canis familiaris	82.07	0.00e+00	1599.00
IUUC-Cpo-021800	Cavia porcellus	89.49	0.00e+00	1622.00
IUUC-Dre-028416	Danio rerio	57.22	0.00e+00	1040.00
IUUC-Dno-029101	Dasypus novemcinctus	90.46	0.00e+00	1674.00
IUUC-Eca-033385	Equus caballus	92.32	0.00e+00	1729.00
IUUC-Fca-036545	Felis catus	90.93	0.00e+00	1723.00
IUUC-Fal-037208	Ficedula albicollis	74.20	0.00e+00	1458.00
IUUC-Gmo-039622	Gadus morhua	51.01	0.00e+00	949.00
IUUC-Gga-041182	Gallus gallus	74.49	0.00e+00	1417.00
IUUC-Gac-041682	Gasterosteus aculeatus	55.29	0.00e+00	1044.00
IUUC-Ggo-044510	Gorilla gorilla	97.12	0.00e+00	1822.00
IUUC-Hsa-045964	Homo sapiens	97.12	0.00e+00	1825.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	91.14	0.00e+00	1700.00
IUUC-Lch-050041	Latimeria chalumnae	68.83	0.00e+00	1303.00
IUUC-Loc-052464	Lepisosteus oculatus	61.78	0.00e+00	1196.00
IUUC-Laf-053544	Loxodonta africana	90.39	0.00e+00	1705.00
IUUC-Mcc-054867	Macaca mulatta	98.51	0.00e+00	1847.00
IUUC-Meu-055986	Macropus eugenii	82.44	0.00e+00	1593.00
IUUC-Mga-059262	Meleagris gallopavo	75.13	0.00e+00	1429.00
IUUC-Mdo-062686	Monodelphis domestica	80.51	0.00e+00	1569.00
IUUC-Mmu-064297	Mus musculus	88.05	0.00e+00	1707.00
IUUC-Mpu-066027	Mustela putorius furo	91.04	0.00e+00	1699.00
IUUC-Mlu-067885	Myotis lucifugus	91.78	0.00e+00	1732.00
IUUC-Nle-070073	Nomascus leucogenys	96.37	0.00e+00	1816.00
IUUC-Ont-071400	Oreochromis niloticus	58.43	0.00e+00	1110.00
IUUC-Oan-072920	Ornithorhynchus anatinus	91.88	3.00e-177	614.00
IUUC-Ocu-074616	Oryctolagus cuniculus	92.32	0.00e+00	1711.00
IUUC-Ola-086828	Oryzias latipes	57.22	0.00e+00	1071.00
IUUC-Oga-088675	Otolemur garnettii	94.46	5.00e-155	539.00
IUUC-Oar-090380	Ovis aries	90.29	0.00e+00	1727.00
IUUC-Ptr-090648	Pan troglodytes	97.23	0.00e+00	1827.00
IUUC-Pan-092036	Papio anubis	98.40	0.00e+00	1844.00
IUUC-Psi-093130	Pelodiscus sinensis	79.36	0.00e+00	1537.00
IUUC-Pfo-097273	Poecilia formosa	56.66	0.00e+00	1057.00
IUUC-Pca-100134	Procavia capensis	84.10	0.00e+00	1556.00
IUUC-Rno-105632	Rattus norvegicus	88.58	0.00e+00	1714.00
IUUC-Sha-107238	Sarcophilus harrisii	80.34	0.00e+00	1571.00
IUUC-Sar-113591	Sorex araneus	76.92	0.00e+00	1413.00
IUUC-Ssc-115720	Sus scrofa	91.14	0.00e+00	1710.00
IUUC-Tgu-117030	Taeniopygia guttata	74.35	0.00e+00	1457.00
IUUC-Tru-117669	Takifugu rubripes	55.12	0.00e+00	993.00
IUUC-Tsy-119578	Tarsius syrichta	87.30	0.00e+00	1647.00
IUUC-Tni-120073	Tetraodon nigroviridis	55.93	0.00e+00	1034.00
IUUC-Tbe-128029	Tupaia belangeri	85.97	0.00e+00	954.00
IUUC-Ttr-128677	Tursiops truncatus	82.56	0.00e+00	764.00
IUUC-Vpa-130346	Vicugna pacos	93.37	0.00e+00	706.00
IUUC-Xtr-132442	Xenopus tropicalis	85.57	5.00e-100	356.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence