iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fca-035730

Ensembl Protein ID

ENSFCAP00000011394.3

UniProt Accession

M3WGM8; M3WGM8_FELCA

Genbank Protein ID

ENSFCAP00000011394

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02117013

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000012280.3	ENSFCAT00000012283.3	ENSFCAP00000011394.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	5.40e-09	36.2	119	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm...vdqtdfeeHlDeCl 24
           ++C++Cqk    +++t++e+H+++Cl
   Q: 119  FFCQICQKNlsaMNVTRREQHVNRCL 144
           89***********************8 PP

Organism

Felis catus

Protein Sequence
(Fasta)

SLPEDARDSD SQPPPSHLTA MGPSPSKPRT AELVLQRMQQ FKRADPERLQ HASERCSLES 60
AVEENLPKGP REEMTAGDGS GPWLPATESD AAVALALQQE FGQEQASLPD ENLEETGLFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTTGCCAG AGGACGCTCG GGACAGCGAC TCCCAGCCCC CTCCTTCCCA TCTGACTGCG 60
ATGGGGCCCA GTCCCTCCAA ACCCCGGACG GCCGAGCTCG TCCTGCAGCG AATGCAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:0036297--P:interstrand cross-link repair
GO:0000706--P:meiotic DNA double-strand break processing
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0000712--P:resolution of meiotic recombination intermediates
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	75.31	0.00e+00	1852.00
IUUC-Apl-003261	Anas platyrhynchos	36.73	0.00e+00	695.00
IUUC-Aca-004455	Anolis carolinensis	74.07	9.00e-19	84.30
IUUC-Ame-010993	Astyanax mexicanus	36.62	2.00e-12	65.50
IUUC-Bgr-012247	Blumeria graminis	39.58	1.20e-01	32.30
IUUC-Bta-013472	Bos taurus	60.35	0.00e+00	1358.00
IUUC-Cja-019406	Callithrix jacchus	59.78	0.00e+00	1354.00
IUUC-Cfa-020129	Canis familiaris	72.59	0.00e+00	1795.00
IUUC-Cpo-021944	Cavia porcellus	55.67	0.00e+00	1289.00
IUUC-Csa-023941	Chlorocebus sabaeus	57.23	1.00e-180	627.00
IUUC-Cho-024847	Choloepus hoffmanni	70.20	5.00e-124	439.00
IUUC-Cin-025405	Ciona intestinalis	40.38	2.00e-06	47.00
IUUC-Csv-025916	Ciona savignyi	29.03	2.00e-05	42.70
IUUC-Dre-027764	Danio rerio	34.80	2.00e-72	268.00
IUUC-Dno-030083	Dasypus novemcinctus	56.94	0.00e+00	1228.00
IUUC-Dor-031129	Dipodomys ordii	50.29	0.00e+00	893.00
IUUC-Ete-032536	Echinops telfairi	45.81	2.00e-113	404.00
IUUC-Eca-033407	Equus caballus	69.81	0.00e+00	1547.00
IUUC-Eeu-034473	Erinaceus europaeus	49.78	7.00e-57	216.00
IUUC-Fal-036850	Ficedula albicollis	46.95	1.00e-141	498.00
IUUC-Gmo-038677	Gadus morhua	41.87	3.00e-33	136.00
IUUC-Gga-041088	Gallus gallus	45.43	1.00e-141	498.00
IUUC-Gac-041824	Gasterosteus aculeatus	43.42	3.00e-13	68.20
IUUC-Ggo-045642	Gorilla gorilla	60.91	0.00e+00	1319.00
IUUC-Hsa-047035	Homo sapiens	61.70	0.00e+00	1442.00
IUUC-Itr-049010	Ictidomys tridecemlineatus	59.36	0.00e+00	1340.00
IUUC-Lch-050364	Latimeria chalumnae	40.35	2.00e-79	291.00
IUUC-Loc-052423	Lepisosteus oculatus	41.72	6.00e-45	177.00
IUUC-Laf-053910	Loxodonta africana	57.31	0.00e+00	1388.00
IUUC-Mcc-055883	Macaca mulatta	62.02	0.00e+00	1462.00
IUUC-Meu-056224	Macropus eugenii	49.87	2.00e-90	327.00
IUUC-Mga-059880	Meleagris gallopavo	45.40	5.00e-140	492.00
IUUC-Mvi-060510	Microbotryum violaceum	31.34	2.00e-04	41.20
IUUC-Mmr-061715	Microcebus murinus	61.25	0.00e+00	1499.00
IUUC-Mdo-062426	Monodelphis domestica	43.99	0.00e+00	739.00
IUUC-Mmu-063947	Mus musculus	54.53	0.00e+00	1315.00
IUUC-Mpu-066184	Mustela putorius furo	71.18	0.00e+00	1852.00
IUUC-Mlu-067533	Myotis lucifugus	67.04	0.00e+00	1659.00
IUUC-Nle-069204	Nomascus leucogenys	60.84	0.00e+00	1444.00
IUUC-Opr-070377	Ochotona princeps	62.18	0.00e+00	761.00
IUUC-Ont-072551	Oreochromis niloticus	32.51	4.00e-67	250.00
IUUC-Oan-073350	Ornithorhynchus anatinus	54.74	1.00e-96	347.00
IUUC-Ocu-074915	Oryctolagus cuniculus	61.97	0.00e+00	756.00
IUUC-Ola-087360	Oryzias latipes	64.62	9.00e-19	87.00
IUUC-Olu-087899	Ostreococcus lucimarinus	23.36	1.50e-01	30.80
IUUC-Oga-089106	Otolemur garnettii	57.59	0.00e+00	1198.00
IUUC-Oar-089289	Ovis aries	63.00	0.00e+00	976.00
IUUC-Ptr-091469	Pan troglodytes	61.46	0.00e+00	1417.00
IUUC-Pan-091841	Papio anubis	60.22	0.00e+00	1174.00
IUUC-Psi-093842	Pelodiscus sinensis	46.09	6.00e-127	449.00
IUUC-Pma-094732	Petromyzon marinus	57.69	2.00e-09	55.50
IUUC-Pfo-097299	Poecilia formosa	41.01	4.00e-34	140.00
IUUC-Pab-098271	Pongo abelii	61.67	0.00e+00	1411.00
IUUC-Pca-100721	Procavia capensis	54.37	0.00e+00	793.00
IUUC-Pva-102276	Pteropus vampyrus	69.70	0.00e+00	1867.00
IUUC-Rno-105619	Rattus norvegicus	54.04	0.00e+00	1237.00
IUUC-Sha-106722	Sarcophilus harrisii	45.54	0.00e+00	753.00
IUUC-Sar-113673	Sorex araneus	56.85	8.00e-64	239.00
IUUC-Sre-115039	Sporisorium reilianum	33.96	7.00e-04	37.70
IUUC-Ssc-115383	Sus scrofa	62.16	0.00e+00	1423.00
IUUC-Tgu-117243	Taeniopygia guttata	47.39	6.00e-89	320.00
IUUC-Tru-118092	Takifugu rubripes	73.21	2.00e-19	89.40
IUUC-Tsy-119362	Tarsius syrichta	53.80	4.00e-148	520.00
IUUC-Tni-120380	Tetraodon nigroviridis	74.55	2.00e-19	89.00
IUUC-Tbe-127404	Tupaia belangeri	46.49	1.00e-178	621.00
IUUC-Ttr-128317	Tursiops truncatus	67.29	0.00e+00	1499.00
IUUC-Uma-129640	Ustilago maydis	36.36	5.00e-05	42.00
IUUC-Xtr-132533	Xenopus tropicalis	41.67	9.00e-95	342.00
IUUC-Xma-134059	Xiphophorus maculatus	37.75	7.00e-35	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence