iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062426

Ensembl Protein ID

ENSMODP00000020500.3

UniProt Accession

F7AT45; F7AT45_MONDO

Protein Name

Uncharacterized protein

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000016412.4	ENSMODT00000020863.4	ENSMODP00000020500.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	3.90e-10	39.9	299	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm.vdqtdfeeHlDeCl 24
            +CP+C+k  ++++ +++Hl +C+
   Q: 299  PECPICGKPfTTLKSRNSHLKQCA 322
           58*********************6 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

KLMDESDDDF NELCSKLLRR VRKKGVKEGP GETRTQEEAS SFQTKSKLKR TKLPPKTKIS 60
HVTTGKKTKL GGLAPGNEGK CEVEVTSHES KVAPSSEREE DLLAPTQKGP MPQLSQLKNQ 120

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Nucleotide Sequence
(Fasta)

AAATTGATGG ATGAGTCAGA TGATGATTTT AATGAGCTAT GCTCCAAACT GTTGCGAAGA 60
GTAAGAAAGA AAGGGGTCAA AGAAGGCCCA GGAGAAACAA GGACTCAAGA GGAGGCAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR023413--GFP-like
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:0036297--P:interstrand cross-link repair
GO:0000706--P:meiotic DNA double-strand break processing
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0000712--P:resolution of meiotic recombination intermediates
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	52.58	0.00e+00	683.00
IUUC-Apl-003261	Anas platyrhynchos	39.79	2.00e-173	603.00
IUUC-Aca-004455	Anolis carolinensis	59.42	1.00e-19	87.00
IUUC-Ame-010993	Astyanax mexicanus	40.18	1.00e-12	66.20
IUUC-Bta-013472	Bos taurus	40.81	0.00e+00	669.00
IUUC-Cel-018663	Caenorhabditis elegans	40.91	2.00e-04	41.20
IUUC-Cja-019406	Callithrix jacchus	43.72	0.00e+00	989.00
IUUC-Cfa-020129	Canis familiaris	42.37	0.00e+00	721.00
IUUC-Cpo-021944	Cavia porcellus	42.33	0.00e+00	670.00
IUUC-Csa-023941	Chlorocebus sabaeus	53.48	2.00e-90	327.00
IUUC-Cho-024847	Choloepus hoffmanni	49.90	3.00e-107	384.00
IUUC-Cin-025405	Ciona intestinalis	38.89	4.00e-06	45.80
IUUC-Csv-025916	Ciona savignyi	31.43	3.00e-06	45.40
IUUC-Dre-027764	Danio rerio	33.78	6.00e-82	300.00
IUUC-Dno-030083	Dasypus novemcinctus	50.94	3.00e-172	600.00
IUUC-Dor-031129	Dipodomys ordii	52.82	2.00e-149	524.00
IUUC-Dse-031510	Dothistroma septosporum	41.67	4.00e-03	37.40
IUUC-Ete-032536	Echinops telfairi	40.26	3.00e-48	187.00
IUUC-Eca-033407	Equus caballus	43.10	1.00e-168	587.00
IUUC-Eeu-034473	Erinaceus europaeus	53.49	1.00e-17	86.30
IUUC-Fca-035730	Felis catus	43.82	0.00e+00	729.00
IUUC-Fal-036850	Ficedula albicollis	38.58	8.00e-158	551.00
IUUC-Gmo-038677	Gadus morhua	40.70	3.00e-28	120.00
IUUC-Gga-041088	Gallus gallus	38.02	2.00e-172	600.00
IUUC-Gac-041824	Gasterosteus aculeatus	78.95	8.00e-14	70.10
IUUC-Ggo-045642	Gorilla gorilla	45.45	2.00e-172	600.00
IUUC-Hsa-047035	Homo sapiens	44.14	0.00e+00	731.00
IUUC-Itr-049010	Ictidomys tridecemlineatus	51.27	0.00e+00	683.00
IUUC-Kpa-049328	Komagataella pastoris	27.14	4.50e-02	33.10
IUUC-Lch-050364	Latimeria chalumnae	46.37	4.00e-81	296.00
IUUC-Loc-052423	Lepisosteus oculatus	29.88	4.00e-51	197.00
IUUC-Laf-053910	Loxodonta africana	44.39	0.00e+00	1016.00
IUUC-Mcc-055883	Macaca mulatta	51.67	4.00e-86	313.00
IUUC-Meu-056224	Macropus eugenii	68.49	2.00e-141	497.00
IUUC-Mga-059880	Meleagris gallopavo	38.22	0.00e+00	735.00
IUUC-Mvi-060510	Microbotryum violaceum	35.94	3.00e-05	44.30
IUUC-Mmr-061715	Microcebus murinus	44.09	0.00e+00	781.00
IUUC-Mmu-063947	Mus musculus	50.33	1.00e-171	597.00
IUUC-Mpu-066184	Mustela putorius furo	48.05	0.00e+00	671.00
IUUC-Mlu-067533	Myotis lucifugus	44.81	0.00e+00	706.00
IUUC-Nle-069204	Nomascus leucogenys	52.40	0.00e+00	639.00
IUUC-Opr-070377	Ochotona princeps	49.02	7.00e-177	615.00
IUUC-Ont-072551	Oreochromis niloticus	33.28	5.00e-72	266.00
IUUC-Oan-073350	Ornithorhynchus anatinus	52.43	1.00e-130	459.00
IUUC-Ocu-074915	Oryctolagus cuniculus	48.76	0.00e+00	637.00
IUUC-Ola-087360	Oryzias latipes	40.00	1.00e-35	143.00
IUUC-Oga-089106	Otolemur garnettii	41.43	0.00e+00	802.00
IUUC-Oar-089289	Ovis aries	41.82	2.00e-173	603.00
IUUC-Ptr-091469	Pan troglodytes	43.95	0.00e+00	716.00
IUUC-Pan-091841	Papio anubis	40.12	4.00e-128	453.00
IUUC-Psi-093842	Pelodiscus sinensis	40.16	5.00e-163	569.00
IUUC-Pma-094732	Petromyzon marinus	46.48	8.00e-09	53.50
IUUC-Pfo-097299	Poecilia formosa	38.57	3.00e-32	134.00
IUUC-Pab-098271	Pongo abelii	43.96	0.00e+00	721.00
IUUC-Pca-100721	Procavia capensis	47.37	0.00e+00	631.00
IUUC-Pva-102276	Pteropus vampyrus	47.85	0.00e+00	1094.00
IUUC-Rno-105619	Rattus norvegicus	40.62	0.00e+00	946.00
IUUC-Sha-106722	Sarcophilus harrisii	73.47	0.00e+00	2267.00
IUUC-Sar-113673	Sorex araneus	46.59	2.00e-62	235.00
IUUC-Sre-115039	Sporisorium reilianum	30.51	3.00e-04	39.30
IUUC-Ssc-115383	Sus scrofa	51.36	2.00e-169	590.00
IUUC-Tgu-117243	Taeniopygia guttata	51.22	6.00e-96	344.00
IUUC-Tru-118092	Takifugu rubripes	41.50	4.00e-35	141.00
IUUC-Tsy-119362	Tarsius syrichta	48.69	2.00e-103	371.00
IUUC-Tni-120380	Tetraodon nigroviridis	78.57	1.00e-21	96.70
IUUC-Tbe-127404	Tupaia belangeri	43.32	4.00e-59	224.00
IUUC-Ttr-128317	Tursiops truncatus	43.38	0.00e+00	941.00
IUUC-Uma-129640	Ustilago maydis	32.20	3.00e-05	42.70
IUUC-Xtr-132533	Xenopus tropicalis	42.80	4.00e-98	353.00
IUUC-Xma-134059	Xiphophorus maculatus	37.89	6.00e-34	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence