iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084546

Ensembl Protein ID

ORUFI09G16840.1

UniProt Accession

A0A0E0QTF2; A0A0E0QTF2_ORYRU

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI09G16840	ORUFI09G16840.1	ORUFI09G16840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-69	236.5	226	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           Gl NlgNtC++N+v+Q+L+++  lr+ +l           p+ p+g+ll+sl+klf e    ++  +a sp++l++ ++++ ++f+g++ qD++
   Q: 226  GLPNLGNTCFFNAVMQSLLALDRLRSKMLG----------PDVPTGALLMSLKKLFMETSasNDVGGALSPKNLFSNICSKYPQFRGFQMQDSH 309
           9*****************************..........345789**********99987777788*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.. 185
           E+l+++ld+l++e ++                + + a+e      +++++ +F+gql+s++   ec ++s+++++fldlslpvp+++  +k+  
   Q: 310  ELLRCFLDGLHTEENE----------------ARKLADEASSATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPVPSRRPPAKSvs 387
           **************33................34445667888999**************************************9998888899 PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 388  sppakrnkqslrdrnknrrygkistrvtptievsnkekiqtvaegnnslipgsesgqvvsekepepsecsescasvpnleqtgtsnvedgtcwl 481
           ********************************************************************************************** PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 482  dyiddadeakseildsadsieagqiwedkgvtygpflpqddalskeqvlgsehsgenpiddatssqpvillpykefgstademdgttensqkpe 575
           ********************************************************************************************** PP
   S: 186  ............................................................................slqdcLesftkeeelege 203
                                                                                       s++ cL+ ft++e l   
   Q: 576  davappavsplpednaqpasvgdgdqddyvglgdmfnepevtsevkketgtvedidvmawssnsaedevddsnapvSVEGCLALFTEPELLS-- 667
           *******************************************************************************************8.. PP
   S: 204  nkyycekckkk 214
           + ++ce c ++
   Q: 668  EPWHCELCSDS 678
           59******865 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MGKRVKAKAK NPRKAQQQQE PTAAAPSDAG SGDAAAAAAQ DSGNSTEEAA AAAAAAASAS 60
GREQCGHYGG DSARLDKVLL EIMTSKHFAS CEHCRDDAPR KKGGGKEKGG KQQQKKKGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTTGCGT CTCGGCATCG GAAGCGATGG GGAAGAGGGT GAAGGCGAAG GCCAAGAATC 60
CGAGGAAAGC ACAGCAACAA CAGGAGCCGA CGGCAGCGGC GCCCTCTGAT GCTGGATCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	70.63	0.00e+00	1281.00
IUUC-Aml-001931	Ailuropoda melanoleuca	29.79	2.00e-32	133.00
IUUC-Atr-003015	Amborella trichopoda	32.29	1.00e-62	234.00
IUUC-Apl-004145	Anas platyrhynchos	29.13	2.00e-30	127.00
IUUC-Aca-004314	Anolis carolinensis	38.16	1.00e-26	114.00
IUUC-Aly-006422	Arabidopsis lyrata	39.43	4.00e-49	189.00
IUUC-Ath-006732	Arabidopsis thaliana	39.93	2.00e-53	204.00
IUUC-Ame-011659	Astyanax mexicanus	38.16	4.00e-24	106.00
IUUC-Bta-013362	Bos taurus	30.06	2.00e-30	127.00
IUUC-Bdi-014465	Brachypodium distachyon	67.15	0.00e+00	1259.00
IUUC-Bol-015191	Brassica oleracea	32.13	2.00e-64	240.00
IUUC-Bra-016751	Brassica rapa	40.97	1.00e-47	184.00
IUUC-Cja-019177	Callithrix jacchus	29.39	4.00e-32	132.00
IUUC-Cfa-020051	Canis familiaris	29.79	8.00e-32	131.00
IUUC-Cpo-021886	Cavia porcellus	29.73	5.00e-32	132.00
IUUC-Csa-024103	Chlorocebus sabaeus	30.55	5.00e-32	132.00
IUUC-Cho-024315	Choloepus hoffmanni	39.29	1.00e-18	88.20
IUUC-Cme-027348	Cyanidioschyzon merolae	35.25	5.00e-19	89.00
IUUC-Dre-028388	Danio rerio	26.45	2.00e-28	120.00
IUUC-Dno-029409	Dasypus novemcinctus	29.41	6.00e-32	132.00
IUUC-Dor-030443	Dipodomys ordii	39.07	2.00e-25	110.00
IUUC-Ete-032807	Echinops telfairi	39.74	5.00e-26	112.00
IUUC-Eca-033479	Equus caballus	29.19	5.00e-31	129.00
IUUC-Eeu-034835	Erinaceus europaeus	38.41	4.00e-25	109.00
IUUC-Fca-036320	Felis catus	29.86	7.00e-33	135.00
IUUC-Fal-037029	Ficedula albicollis	30.25	3.00e-31	130.00
IUUC-Gmo-039480	Gadus morhua	27.25	1.00e-25	110.00
IUUC-Gga-040527	Gallus gallus	28.92	4.00e-27	116.00
IUUC-Gac-042343	Gasterosteus aculeatus	32.47	6.00e-26	112.00
IUUC-Gma-043919	Glycine max	32.96	4.00e-74	272.00
IUUC-Ggo-045598	Gorilla gorilla	29.97	9.00e-31	128.00
IUUC-Hsa-046598	Homo sapiens	29.11	6.00e-31	129.00
IUUC-Hvu-047146	Hordeum vulgare	70.34	0.00e+00	1286.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	30.92	4.00e-34	139.00
IUUC-Lch-050536	Latimeria chalumnae	29.13	6.00e-28	119.00
IUUC-Lpe-050703	Leersia perrieri	83.90	0.00e+00	1645.00
IUUC-Loc-051814	Lepisosteus oculatus	29.23	5.00e-30	125.00
IUUC-Laf-053732	Loxodonta africana	30.66	2.00e-32	134.00
IUUC-Mcc-054661	Macaca mulatta	30.55	6.00e-32	132.00
IUUC-Meu-055967	Macropus eugenii	26.79	9.00e-22	98.60
IUUC-Mtr-057945	Medicago truncatula	39.86	2.00e-55	210.00
IUUC-Mga-059551	Meleagris gallopavo	29.91	5.00e-31	129.00
IUUC-Mvi-060391	Microbotryum violaceum	33.89	5.00e-20	92.80
IUUC-Mmr-061747	Microcebus murinus	30.06	9.00e-32	131.00
IUUC-Mdo-062220	Monodelphis domestica	37.56	2.00e-28	120.00
IUUC-Mmu-063582	Mus musculus	30.06	1.00e-30	128.00
IUUC-Mac-064941	Musa acuminata	39.18	1.00e-114	407.00
IUUC-Mpu-066339	Mustela putorius furo	30.68	1.00e-31	130.00
IUUC-Mlu-067248	Myotis lucifugus	29.88	1.00e-30	127.00
IUUC-Nle-069252	Nomascus leucogenys	30.84	2.00e-32	134.00
IUUC-Opr-070969	Ochotona princeps	28.82	7.00e-29	122.00
IUUC-Ont-071786	Oreochromis niloticus	27.01	3.00e-26	113.00
IUUC-Oan-073656	Ornithorhynchus anatinus	30.60	5.00e-30	125.00
IUUC-Ocu-074704	Oryctolagus cuniculus	28.82	5.00e-32	132.00
IUUC-Oba-075094	Oryza barthii	99.53	0.00e+00	1925.00
IUUC-Obr-076743	Oryza brachyantha	85.20	0.00e+00	1638.00
IUUC-Ogl-077739	Oryza glaberrima	98.16	0.00e+00	1614.00
IUUC-Ogu-078851	Oryza glumaepatula	99.62	0.00e+00	1927.00
IUUC-Oin-079402	Oryza indica	99.24	0.00e+00	1923.00
IUUC-Olo-080431	Oryza longistaminata	98.36	0.00e+00	1834.00
IUUC-Ome-081580	Oryza meridionalis	97.16	0.00e+00	1911.00
IUUC-Oni-082644	Oryza nivara	99.34	0.00e+00	1924.00
IUUC-Opu-083452	Oryza punctata	92.34	0.00e+00	1844.00
IUUC-Osa-085858	Oryza sativa	99.53	0.00e+00	1924.00
IUUC-Ola-086795	Oryzias latipes	27.41	9.00e-26	111.00
IUUC-Oga-088713	Otolemur garnettii	29.91	3.00e-32	133.00
IUUC-Oar-089971	Ovis aries	28.82	2.00e-30	127.00
IUUC-Ptr-091670	Pan troglodytes	30.26	3.00e-31	129.00
IUUC-Pan-092293	Papio anubis	30.55	6.00e-32	132.00
IUUC-Psi-093101	Pelodiscus sinensis	29.43	9.00e-28	118.00
IUUC-Ppa-095622	Physcomitrella patens	34.17	3.00e-40	160.00
IUUC-Pfo-097202	Poecilia formosa	34.34	3.00e-26	113.00
IUUC-Pab-098773	Pongo abelii	35.98	1.00e-29	124.00
IUUC-Pop-099588	Populus trichocarpa	32.22	3.00e-64	239.00
IUUC-Pca-101069	Procavia capensis	34.78	2.00e-25	110.00
IUUC-Ppe-101794	Prunus persica	34.88	3.00e-69	256.00
IUUC-Pva-103092	Pteropus vampyrus	39.07	1.00e-25	111.00
IUUC-Rno-105237	Rattus norvegicus	29.19	2.00e-30	127.00
IUUC-Sha-106889	Sarcophilus harrisii	31.21	1.00e-29	124.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	34.87	7.00e-20	92.00
IUUC-Spo-108149	Schizosaccharomyces pombe	38.18	1.00e-25	111.00
IUUC-Sit-110283	Setaria italica	68.06	0.00e+00	1353.00
IUUC-Sly-111491	Solanum lycopersicum	38.46	3.00e-60	226.00
IUUC-Stu-112820	Solanum tuberosum	34.88	7.00e-64	238.00
IUUC-Sar-113530	Sorex araneus	30.77	7.00e-33	135.00
IUUC-Sbi-113785	Sorghum bicolor	65.43	0.00e+00	1259.00
IUUC-Ssc-116091	Sus scrofa	29.07	6.00e-31	129.00
IUUC-Tgu-117478	Taeniopygia guttata	30.67	4.00e-32	132.00
IUUC-Tru-118640	Takifugu rubripes	29.17	2.00e-26	114.00
IUUC-Tsy-118869	Tarsius syrichta	35.32	8.00e-25	108.00
IUUC-Tni-120015	Tetraodon nigroviridis	29.00	8.00e-28	118.00
IUUC-Tca-121701	Theobroma cacao	32.16	3.00e-70	259.00
IUUC-Tae-125305	Triticum aestivum	71.03	0.00e+00	1248.00
IUUC-Tur-126788	Triticum urartu	69.57	0.00e+00	1130.00
IUUC-Tbe-128041	Tupaia belangeri	34.47	7.00e-24	105.00
IUUC-Ttr-128271	Tursiops truncatus	29.97	1.00e-32	134.00
IUUC-Vpa-130674	Vicugna pacos	28.82	2.00e-32	133.00
IUUC-Xtr-131869	Xenopus tropicalis	30.03	2.00e-29	124.00
IUUC-Xma-134195	Xiphophorus maculatus	33.61	1.00e-26	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence