iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049549

Ensembl Protein ID

ENSLACP00000005707.1

UniProt Accession

H3A7T6; H3A7T6_LATCH

Genbank Protein ID

ENSLACP00000005707

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01238531

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000005071.1	ENSLACT00000005756.1	ENSLACP00000005707.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-39	131.0	188	219
UBD/Beta-Prp	1.90e-62	211.4	13	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+ ++++l f +d  llv++sdDg ik++D+
   Q: 188  GHAMPIRSLTFsPDsQLLVTASDDGYIKIYDV 219
           79999*******999****************8 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf....spdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvh 88
           + +h++ i  v++    +++++ ++tgs d+ +kvw++ ++kl   + l+gh+ +v +v++s++g i +++s D++i++wdl+tgk++ 
   Q: 13   Q-AHDDAIWTVAWgmseKDGSETIVTGSLDDLVKVWKWADEKLelQWALEGHQLGVVSVDISHTGTIAASSSLDAHIRLWDLETGKQIK 100
           4.4555555588888888999*********************9888999**************************************** PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
            l +   +++s++fsp++++l++Gsh   ++++ +e+g++    l+ + +++ +++++pdg++l+sG+ D++++++d++tgkll+tl+g
   Q: 101  LLDAGPVDAWSVAFSPDSKYLATGSHLGKVNIFGVESGKKEF-SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
           ****************************************99.9********************************************9 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnss 266
            h  +++sl+f+++++ lv++s+dg++k++d+q+ +   tl gh ++v+sv+f+p+d+++vs  s + ++i  +    ++  + +   +
   Q: 189  -HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHASLAGTLSGHGSWVLSVAFCPDDTHFVSSLSRKGVKIKRIYIYVCIFIYFKILLQ 276
           .**********************************************************************655555666666666699 PP
   S: 267  visvavlsfgdnvlvlgsedskvniwkl 294
           v+  ++ + +++++v++++d++v+++++
   Q: 277  VWGAKY-NGNGSKIVSVGDDQEVHVYDC 303
           999998.888999************997 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSTQYSILFK QEQAHDDAIW TVAWGMSEKD GSETIVTGSL DDLVKVWKWA DEKLELQWAL 60
EGHQLGVVSV DISHTGTIAA SSSLDAHIRL WDLETGKQIK LLDAGPVDAW SVAFSPDSKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATTCCAG TGCCGTGTTG CCACCATAGA AATCTTAAAG CTGAAAAGGC CTTCTTCCGT 60
GTCCGATATC TATTGTTGTC ATGGCGGTTT GCTGAGAGGA ACTGGAAACC AAAAACAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	33.23	2.00e-43	169.00
IUUC-Aml-002245	Ailuropoda melanoleuca	83.93	7.00e-148	516.00
IUUC-Atr-003142	Amborella trichopoda	38.20	4.00e-34	137.00
IUUC-Apl-003179	Anas platyrhynchos	82.62	1.00e-144	505.00
IUUC-Aca-004880	Anolis carolinensis	81.31	7.00e-150	522.00
IUUC-Aly-005956	Arabidopsis lyrata	36.54	2.00e-53	202.00
IUUC-Ath-007230	Arabidopsis thaliana	36.22	5.00e-48	184.00
IUUC-Acl-008297	Aspergillus clavatus	27.63	7.00e-23	101.00
IUUC-Ang-009702	Aspergillus niger	27.68	1.00e-27	116.00
IUUC-Ame-011511	Astyanax mexicanus	82.08	2.00e-145	507.00
IUUC-Bgr-012189	Blumeria graminis	28.75	9.00e-31	127.00
IUUC-Bta-012936	Bos taurus	84.26	1.00e-147	515.00
IUUC-Bdi-015020	Brachypodium distachyon	35.02	1.00e-42	166.00
IUUC-Bol-015927	Brassica oleracea	38.34	1.00e-54	206.00
IUUC-Bra-017323	Brassica rapa	37.50	4.00e-54	204.00
IUUC-Cja-019961	Callithrix jacchus	83.61	5.00e-147	513.00
IUUC-Cfa-020862	Canis familiaris	83.61	3.00e-147	514.00
IUUC-Cpo-021356	Cavia porcellus	84.11	2.00e-146	511.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	39.66	4.00e-52	197.00
IUUC-Csa-024067	Chlorocebus sabaeus	83.28	2.00e-146	511.00
IUUC-Cin-025261	Ciona intestinalis	64.26	4.00e-118	417.00
IUUC-Cgl-026446	Colletotrichum gloeosporioides	27.04	2.00e-30	125.00
IUUC-Dre-027706	Danio rerio	69.18	1.00e-113	402.00
IUUC-Dno-029084	Dasypus novemcinctus	83.39	4.00e-146	509.00
IUUC-Dor-030353	Dipodomys ordii	84.93	1.00e-106	378.00
IUUC-Dme-031836	Drosophila melanogaster	49.23	2.00e-84	305.00
IUUC-Ete-032261	Echinops telfairi	81.97	1.00e-141	495.00
IUUC-Eca-034231	Equus caballus	77.05	3.00e-133	467.00
IUUC-Eeu-034828	Erinaceus europaeus	82.82	4.00e-137	480.00
IUUC-Fca-036569	Felis catus	83.61	2.00e-147	514.00
IUUC-Fal-037469	Ficedula albicollis	84.26	4.00e-148	516.00
IUUC-Fox-038047	Fusarium oxysporum	30.74	5.00e-29	121.00
IUUC-Gmo-039579	Gadus morhua	82.30	2.00e-142	498.00
IUUC-Gga-040808	Gallus gallus	84.59	1.00e-141	495.00
IUUC-Gac-042100	Gasterosteus aculeatus	82.30	3.00e-143	500.00
IUUC-Gma-043509	Glycine max	37.81	1.00e-55	209.00
IUUC-Ggo-045227	Gorilla gorilla	83.61	5.00e-147	513.00
IUUC-Hsa-045839	Homo sapiens	83.61	5.00e-147	513.00
IUUC-Hvu-047591	Hordeum vulgare	35.76	2.00e-45	175.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	83.93	1.00e-147	515.00
IUUC-Lpe-050746	Leersia perrieri	36.66	1.00e-42	166.00
IUUC-Loc-052540	Lepisosteus oculatus	85.57	1.00e-149	521.00
IUUC-Lma-052992	Leptosphaeria maculans	26.71	1.00e-26	113.00
IUUC-Laf-053907	Loxodonta africana	83.93	1.00e-147	515.00
IUUC-Mcc-055828	Macaca mulatta	78.15	6.00e-143	499.00
IUUC-Meu-056075	Macropus eugenii	84.25	8.00e-121	425.00
IUUC-Mtr-057728	Medicago truncatula	37.18	1.00e-52	199.00
IUUC-Mga-059872	Meleagris gallopavo	84.59	8.00e-149	519.00
IUUC-Mvi-060564	Microbotryum violaceum	32.30	3.00e-29	122.00
IUUC-Mmr-060985	Microcebus murinus	83.56	7.00e-140	489.00
IUUC-Mdo-062758	Monodelphis domestica	82.57	2.00e-145	508.00
IUUC-Mmu-063580	Mus musculus	83.93	5.00e-147	513.00
IUUC-Mac-064880	Musa acuminata	37.94	9.00e-54	203.00
IUUC-Mpu-066577	Mustela putorius furo	83.93	5.00e-147	513.00
IUUC-Nle-069573	Nomascus leucogenys	83.61	5.00e-147	513.00
IUUC-Opr-070216	Ochotona princeps	84.05	6.00e-146	509.00
IUUC-Ont-071981	Oreochromis niloticus	84.59	2.00e-146	511.00
IUUC-Oan-073223	Ornithorhynchus anatinus	91.96	5.00e-106	376.00
IUUC-Ocu-074199	Oryctolagus cuniculus	71.48	8.00e-118	416.00
IUUC-Oba-075255	Oryza barthii	36.92	7.00e-36	144.00
IUUC-Obr-076168	Oryza brachyantha	40.99	1.00e-29	123.00
IUUC-Ogl-077777	Oryza glaberrima	35.81	2.00e-43	169.00
IUUC-Ogu-078780	Oryza glumaepatula	35.81	2.00e-43	169.00
IUUC-Oin-079228	Oryza indica	35.81	5.00e-46	177.00
IUUC-Ome-081421	Oryza meridionalis	35.81	1.00e-42	166.00
IUUC-Oni-082997	Oryza nivara	35.81	5.00e-46	177.00
IUUC-Opu-083931	Oryza punctata	36.13	2.00e-43	169.00
IUUC-Oru-084645	Oryza rufipogon	35.81	2.00e-43	169.00
IUUC-Osa-085842	Oryza sativa	35.81	5.00e-46	177.00
IUUC-Ola-086696	Oryzias latipes	83.28	8.00e-145	506.00
IUUC-Olu-087643	Ostreococcus lucimarinus	36.62	3.00e-36	144.00
IUUC-Oga-088272	Otolemur garnettii	83.22	2.00e-145	507.00
IUUC-Oar-089416	Ovis aries	84.26	1.00e-147	515.00
IUUC-Ptr-090944	Pan troglodytes	83.61	5.00e-147	513.00
IUUC-Pan-091861	Papio anubis	83.61	5.00e-147	513.00
IUUC-Psi-093750	Pelodiscus sinensis	86.23	4.00e-151	527.00
IUUC-Pma-094608	Petromyzon marinus	76.13	2.00e-128	451.00
IUUC-Pno-094832	Phaeosphaeria nodorum	33.89	2.00e-25	109.00
IUUC-Ppa-095737	Physcomitrella patens	37.82	4.00e-52	197.00
IUUC-Pfo-096479	Poecilia formosa	84.59	5.00e-139	486.00
IUUC-Pab-098179	Pongo abelii	83.61	5.00e-147	513.00
IUUC-Pop-099532	Populus trichocarpa	38.11	1.00e-52	200.00
IUUC-Pca-100664	Procavia capensis	64.21	7.00e-89	319.00
IUUC-Ppe-102056	Prunus persica	37.34	1.00e-53	202.00
IUUC-Pva-102859	Pteropus vampyrus	83.28	2.00e-146	511.00
IUUC-Pte-104236	Pyrenophora teres	33.33	4.00e-25	108.00
IUUC-Rno-105826	Rattus norvegicus	83.61	2.00e-146	511.00
IUUC-Sha-106660	Sarcophilus harrisii	83.06	3.00e-137	481.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	32.89	8.00e-36	143.00
IUUC-Spo-108244	Schizosaccharomyces pombe	30.42	2.00e-33	136.00
IUUC-Smo-109382	Selaginella moellendorffii	40.47	2.00e-56	212.00
IUUC-Sit-110048	Setaria italica	35.05	3.00e-36	145.00
IUUC-Sly-111249	Solanum lycopersicum	36.31	2.00e-50	192.00
IUUC-Stu-112543	Solanum tuberosum	36.10	6.00e-51	194.00
IUUC-Sar-113743	Sorex araneus	71.48	7.00e-121	426.00
IUUC-Sbi-114309	Sorghum bicolor	36.77	1.00e-37	150.00
IUUC-Ssc-115560	Sus scrofa	79.02	2.00e-136	477.00
IUUC-Tgu-117300	Taeniopygia guttata	84.59	1.00e-148	518.00
IUUC-Tru-117933	Takifugu rubripes	83.61	2.00e-145	508.00
IUUC-Tsy-119574	Tarsius syrichta	73.11	2.00e-123	435.00
IUUC-Tni-120191	Tetraodon nigroviridis	81.43	4.00e-104	370.00
IUUC-Tca-120983	Theobroma cacao	37.93	5.00e-55	207.00
IUUC-Tae-122888	Triticum aestivum	33.75	7.00e-45	174.00
IUUC-Tur-126711	Triticum urartu	33.97	8.00e-44	170.00
IUUC-Tme-127066	Tuber melanosporum	32.34	2.00e-31	129.00
IUUC-Tbe-127802	Tupaia belangeri	83.61	2.00e-147	514.00
IUUC-Ttr-128861	Tursiops truncatus	83.96	3.00e-48	185.00
IUUC-Vda-129720	Verticillium dahliae	27.76	3.00e-23	102.00
IUUC-Vpa-130618	Vicugna pacos	85.54	3.00e-124	437.00
IUUC-Vvi-130981	Vitis vinifera	38.14	7.00e-53	200.00
IUUC-Xtr-132460	Xenopus tropicalis	80.98	2.00e-141	494.00
IUUC-Xma-134154	Xiphophorus maculatus	84.59	3.00e-139	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence